RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 DPH6Q7L8W6 267 aa8.86□□□□□ -0.99
USP9X-201ENST00000324545 CCDC82Q8N4S0 544 aa8.86□□□□□ -0.99
USP9X-201ENST00000324545 BANK1Q8NDB2 785 aa8.86□□□□□ -0.99
USP9X-201ENST00000324545 NUP155O75694 1391 aa8.86□□□□□ -0.99
USP9X-201ENST00000324545 APAF1O14727 1248 aa8.86□□□□□ -0.99
USP9X-201ENST00000324545 KIF6Q6ZMV9 814 aa8.86□□□□□ -0.99
USP9X-201ENST00000324545 RNF20Q5VTR2 975 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 OTUD6BQ8N6M0 293 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 INCENPQ9NQS7 918 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 GRIPAP1Q4V328 841 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 C22orf23Q9BZE7 217 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 LRRCC1Q9C099 1032 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 CABP2Q9NPB3 220 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 MAP2K1Q02750 393 aaPredicted RBP8.85□□□□□ -0.99
USP9X-201ENST00000324545 GSTTP1A0A1W2PQM5 241 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 SMARCE1Q969G3 411 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 GNL1P36915 607 aaPredicted RBP8.85□□□□□ -0.99
USP9X-201ENST00000324545 ZNHIT6Q9NWK9 470 aaKnown RBP8.85□□□□□ -0.99
USP9X-201ENST00000324545 CCDC144CPQ8IYA2 1237 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 TTC36A6NLP5 189 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 RGS22Q8NE09 1264 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 NAT10Q9H0A0 1025 aaKnown RBP8.85□□□□□ -0.99
USP9X-201ENST00000324545 CCDC39Q9UFE4 941 aa8.85□□□□□ -0.99
USP9X-201ENST00000324545 CCDC160A6NGH7 325 aa8.84□□□□□ -0.99
USP9X-201ENST00000324545 CSPG5O95196 566 aa8.84□□□□□ -0.99
USP9X-201ENST00000324545 ZHX1Q9UKY1 873 aaPredicted RBP8.84□□□□□ -0.99
USP9X-201ENST00000324545 TXLNAP40222 546 aa8.84□□□□□ -0.99
USP9X-201ENST00000324545 GUCY1B3Q02153 619 aa8.84□□□□□ -0.99
USP9X-201ENST00000324545 RNF216Q9NWF9 866 aaPredicted RBP8.84□□□□□ -0.99
USP9X-201ENST00000324545 DZIP1LQ8IYY4 767 aaKnown RBP8.84□□□□□ -0.99
USP9X-201ENST00000324545 SH3BP5O60239 455 aa8.84□□□□□ -1
USP9X-201ENST00000324545 GJC1P36383 396 aa8.84□□□□□ -1
USP9X-201ENST00000324545 ISM2Q6H9L7 571 aa8.84□□□□□ -1
USP9X-201ENST00000324545 FAM160A1Q05DH4 1040 aa8.83□□□□□ -1
USP9X-201ENST00000324545 SF3A3Q12874 501 aaKnown RBP eCLIP8.83□□□□□ -1
USP9X-201ENST00000324545 TNMDQ9H2S6 317 aa8.83□□□□□ -1
USP9X-201ENST00000324545 MRVI1Q9Y6F6 885 aa8.83□□□□□ -1
USP9X-201ENST00000324545 TMEM110-MUSTN1A8MSY1 372 aa8.83□□□□□ -1
USP9X-201ENST00000324545 REC8O95072 547 aa8.83□□□□□ -1
USP9X-201ENST00000324545 TRMT1Q9NXH9 659 aaKnown RBP8.83□□□□□ -1
USP9X-201ENST00000324545 ANKRD18AQ8IVF6 992 aa8.83□□□□□ -1
USP9X-201ENST00000324545 CCDC69A6NI79 296 aa8.83□□□□□ -1
USP9X-201ENST00000324545 FILIP1LQ4L180 1135 aa8.83□□□□□ -1
USP9X-201ENST00000324545 AKNAD1Q5T1N1 836 aa8.83□□□□□ -1
USP9X-201ENST00000324545 UBTFL1P0CB47 393 aaPredicted RBP8.83□□□□□ -1
USP9X-201ENST00000324545 CNTRLQ7Z7A1 2325 aa8.83□□□□□ -1
USP9X-201ENST00000324545 ZSWIM4Q9H7M6 989 aa8.82□□□□□ -1
USP9X-201ENST00000324545 PRPF4BQ13523 1007 aaKnown RBP8.82□□□□□ -1
USP9X-201ENST00000324545 SURF6O75683 361 aaKnown RBP8.82□□□□□ -1
USP9X-201ENST00000324545 LRRFIP1Q32MZ4 808 aaKnown RBP8.82□□□□□ -1
USP9X-201ENST00000324545 VTI1AQ96AJ9 217 aa8.82□□□□□ -1
USP9X-201ENST00000324545 MIS18AQ9NYP9 233 aa8.82□□□□□ -1
USP9X-201ENST00000324545 EIF3AQ14152 1382 aaKnown RBP8.82□□□□□ -1
USP9X-201ENST00000324545 TDO2P48775 406 aa8.82□□□□□ -1
USP9X-201ENST00000324545 RRP1P56182 461 aaKnown RBP8.82□□□□□ -1
USP9X-201ENST00000324545 HOMER2Q9NSB8 354 aa8.82□□□□□ -1
USP9X-201ENST00000324545 ATF3P18847 181 aa8.82□□□□□ -1
USP9X-201ENST00000324545 SF3B2Q13435 895 aaKnown RBP8.81□□□□□ -1
USP9X-201ENST00000324545 EIF5P55010 431 aaKnown RBP8.81□□□□□ -1
USP9X-201ENST00000324545 IFFO1Q0D2I5 559 aa8.81□□□□□ -1
USP9X-201ENST00000324545 SART3Q15020 963 aaKnown RBP8.81□□□□□ -1
USP9X-201ENST00000324545 CPLX3Q8WVH0 158 aa8.81□□□□□ -1
USP9X-201ENST00000324545 TBC1D2BQ9UPU7 963 aa8.81□□□□□ -1
USP9X-201ENST00000324545 CCDC91Q7Z6B0 441 aa8.81□□□□□ -1
USP9X-201ENST00000324545 CNTROBQ8N137 903 aa8.81□□□□□ -1
USP9X-201ENST00000324545 NINLQ9Y2I6 1382 aa8.81□□□□□ -1
USP9X-201ENST00000324545 BCAR3O75815 825 aa8.81□□□□□ -1
USP9X-201ENST00000324545 NEK4P51957 841 aa8.81□□□□□ -1
USP9X-201ENST00000324545 KSR1Q8IVT5 923 aa8.81□□□□□ -1
USP9X-201ENST00000324545 SLC3A2P08195 630 aaKnown RBP8.81□□□□□ -1
USP9X-201ENST00000324545 ZWINTO95229 277 aa8.81□□□□□ -1
USP9X-201ENST00000324545 XBP1P17861 261 aa8.81□□□□□ -1
USP9X-201ENST00000324545 HSP90AA4PQ58FG1 418 aa8.81□□□□□ -1
USP9X-201ENST00000324545 CHMP5Q9NZZ3 219 aa8.81□□□□□ -1
USP9X-201ENST00000324545 DDX58O95786 925 aaKnown RBP8.81□□□□□ -1
USP9X-201ENST00000324545 MPHOSPH9Q99550 1183 aa8.81□□□□□ -1
USP9X-201ENST00000324545 FILIP1Q7Z7B0 1213 aa8.8□□□□□ -1
USP9X-201ENST00000324545 SMIM23A6NLE4 172 aa8.8□□□□□ -1
USP9X-201ENST00000324545 SKOR2Q2VWA4 1001 aaPredicted RBP8.8□□□□□ -1
USP9X-201ENST00000324545 ERCC4Q92889 916 aaPredicted RBP8.8□□□□□ -1
USP9X-201ENST00000324545 KIF20AO95235 890 aa8.8□□□□□ -1
USP9X-201ENST00000324545 NAA25Q14CX7 972 aa8.8□□□□□ -1
USP9X-201ENST00000324545 INTS3Q68E01 1043 aaKnown RBP8.8□□□□□ -1
USP9X-201ENST00000324545 VAT1LQ9HCJ6 419 aa8.8□□□□□ -1
USP9X-201ENST00000324545 SLC26A8Q96RN1 970 aa8.8□□□□□ -1
USP9X-201ENST00000324545 ST20-MTHFSA0A0A6YYL1 179 aa8.8□□□□□ -1
USP9X-201ENST00000324545 CENPQQ7L2Z9 268 aaPredicted RBP8.79□□□□□ -1
USP9X-201ENST00000324545 LMAN1P49257 510 aa8.79□□□□□ -1
USP9X-201ENST00000324545 STIM1Q13586 685 aa8.79□□□□□ -1
USP9X-201ENST00000324545 ERC1Q8IUD2 1116 aa8.79□□□□□ -1
USP9X-201ENST00000324545 CIZ1Q9ULV3 898 aaPredicted RBP8.79□□□□□ -1
USP9X-201ENST00000324545 KANK4Q5T7N3 995 aaPredicted RBP8.79□□□□□ -1
USP9X-201ENST00000324545 TSR2Q969E8 191 aaKnown RBP8.79□□□□□ -1
USP9X-201ENST00000324545 GOLGA3Q08378 1498 aa8.79□□□□□ -1
USP9X-201ENST00000324545 SMARCA5O60264 1052 aaPredicted RBP8.79□□□□□ -1
USP9X-201ENST00000324545 LRRC43Q8N309 656 aa8.79□□□□□ -1
USP9X-201ENST00000324545 HDAC5Q9UQL6 1122 aa8.79□□□□□ -1
USP9X-201ENST00000324545 SKAP1Q86WV1 359 aa8.79□□□□□ -1
USP9X-201ENST00000324545 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.79□□□□□ -1
USP9X-201ENST00000324545 PPP2R5CQ13362 524 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms