RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ERICH6Q7L0X2 663 aa16.88■□□□□ 0.29
DDX39A-202ENST00000324340 HOXC9P31274 260 aa16.87■□□□□ 0.29
DDX39A-202ENST00000324340 AMPHP49418 695 aa16.87■□□□□ 0.29
DDX39A-202ENST00000324340 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
DDX39A-202ENST00000324340 HSP90AB2PQ58FF8 381 aa16.87■□□□□ 0.29
DDX39A-202ENST00000324340 ARHGEF25Q86VW2 580 aa16.87■□□□□ 0.29
DDX39A-202ENST00000324340 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
DDX39A-202ENST00000324340 U2SURPO15042 1029 aaKnown RBP16.86■□□□□ 0.29
DDX39A-202ENST00000324340 FCHSD2O94868 740 aa16.86■□□□□ 0.29
DDX39A-202ENST00000324340 NGEFQ8N5V2 710 aa16.86■□□□□ 0.29
DDX39A-202ENST00000324340 ABCC6O95255 1503 aa16.85■□□□□ 0.29
DDX39A-202ENST00000324340 ABCA3Q99758 1704 aa16.85■□□□□ 0.29
DDX39A-202ENST00000324340 TOM1O60784 492 aa16.85■□□□□ 0.29
DDX39A-202ENST00000324340 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
DDX39A-202ENST00000324340 CCDC146Q8IYE0 955 aa16.85■□□□□ 0.29
DDX39A-202ENST00000324340 IP6K1Q92551 441 aa16.85■□□□□ 0.29
DDX39A-202ENST00000324340 PLEKHF1Q96S99 279 aa16.85■□□□□ 0.29
DDX39A-202ENST00000324340 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
DDX39A-202ENST00000324340 FANCIQ9NVI1 1328 aa16.84■□□□□ 0.29
DDX39A-202ENST00000324340 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
DDX39A-202ENST00000324340 COL22A1Q8NFW1 1626 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-202ENST00000324340 CPDO75976 1380 aa16.83■□□□□ 0.28
DDX39A-202ENST00000324340 COL18A1P39060 1754 aa16.82■□□□□ 0.28
DDX39A-202ENST00000324340 APAF1O14727 1248 aa16.82■□□□□ 0.28
DDX39A-202ENST00000324340 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-202ENST00000324340 RBM19Q9Y4C8 960 aaKnown RBP16.81■□□□□ 0.28
DDX39A-202ENST00000324340 ZNF521Q96K83 1311 aa16.81■□□□□ 0.28
DDX39A-202ENST00000324340 PHLPP1O60346 1717 aa16.81■□□□□ 0.28
DDX39A-202ENST00000324340 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
DDX39A-202ENST00000324340 LRRC59Q96AG4 307 aaKnown RBP16.8■□□□□ 0.28
DDX39A-202ENST00000324340 IGSF1Q8N6C5 1336 aa16.8■□□□□ 0.28
DDX39A-202ENST00000324340 KDRP35968 1356 aa16.8■□□□□ 0.28
DDX39A-202ENST00000324340 NEFLP07196 543 aa16.79■□□□□ 0.28
DDX39A-202ENST00000324340 TCP11L2Q8N4U5 519 aa16.79■□□□□ 0.28
DDX39A-202ENST00000324340 CAMTA1Q9Y6Y1 1673 aa16.78■□□□□ 0.28
DDX39A-202ENST00000324340 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
DDX39A-202ENST00000324340 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
DDX39A-202ENST00000324340 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
DDX39A-202ENST00000324340 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
DDX39A-202ENST00000324340 CCDC27Q2M243 656 aa16.77■□□□□ 0.28
DDX39A-202ENST00000324340 RGPD5Q99666 1765 aa16.77■□□□□ 0.28
DDX39A-202ENST00000324340 NCAPD2Q15021 1401 aa16.77■□□□□ 0.27
DDX39A-202ENST00000324340 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.27
DDX39A-202ENST00000324340 HMOX1P09601 288 aa16.77■□□□□ 0.27
DDX39A-202ENST00000324340 EYA1Q99502 592 aa16.77■□□□□ 0.27
DDX39A-202ENST00000324340 LMO7Q8WWI1 1683 aa16.76■□□□□ 0.27
DDX39A-202ENST00000324340 UBAP1LF5GYI3 381 aa16.76■□□□□ 0.27
DDX39A-202ENST00000324340 ZC3H6P61129 1189 aaKnown RBP16.76■□□□□ 0.27
DDX39A-202ENST00000324340 SULT6B1Q6IMI4 303 aa16.76■□□□□ 0.27
DDX39A-202ENST00000324340 KIAA0232Q92628 1395 aa16.75■□□□□ 0.27
DDX39A-202ENST00000324340 FAM208AQ9UK61 1670 aaKnown RBP16.75■□□□□ 0.27
DDX39A-202ENST00000324340 TMPOP42166 694 aaKnown RBP16.75■□□□□ 0.27
DDX39A-202ENST00000324340 AEBP1Q8IUX7 1158 aa16.75■□□□□ 0.27
DDX39A-202ENST00000324340 AXIN2Q9Y2T1 843 aa16.75■□□□□ 0.27
DDX39A-202ENST00000324340 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-202ENST00000324340 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
DDX39A-202ENST00000324340 RGPD2P0DJD1 1756 aa16.73■□□□□ 0.27
DDX39A-202ENST00000324340 ERBB3P21860 1342 aa16.73■□□□□ 0.27
DDX39A-202ENST00000324340 NEFMP07197 916 aa16.73■□□□□ 0.27
DDX39A-202ENST00000324340 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
DDX39A-202ENST00000324340 ERICH6BQ5W0A0 696 aa16.73■□□□□ 0.27
DDX39A-202ENST00000324340 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
DDX39A-202ENST00000324340 PHACTR3Q96KR7 559 aa16.73■□□□□ 0.27
DDX39A-202ENST00000324340 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
DDX39A-202ENST00000324340 ANKRD24Q8TF21 1146 aa16.72■□□□□ 0.27
DDX39A-202ENST00000324340 NFE2L2Q16236 605 aa16.71■□□□□ 0.27
DDX39A-202ENST00000324340 NBPF6Q5VWK0 638 aa16.71■□□□□ 0.27
DDX39A-202ENST00000324340 LTV1Q96GA3 475 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-202ENST00000324340 NBPF4Q96M43 638 aa16.71■□□□□ 0.27
DDX39A-202ENST00000324340 RRP7AQ9Y3A4 280 aaKnown RBP16.71■□□□□ 0.27
DDX39A-202ENST00000324340 GOLGA2Q08379 1002 aa16.7■□□□□ 0.26
DDX39A-202ENST00000324340 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
DDX39A-202ENST00000324340 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
DDX39A-202ENST00000324340 DLG5Q8TDM6 1919 aa16.7■□□□□ 0.26
DDX39A-202ENST00000324340 FKBP8Q14318 412 aa16.69■□□□□ 0.26
DDX39A-202ENST00000324340 NEUROD2Q15784 382 aa16.69■□□□□ 0.26
DDX39A-202ENST00000324340 TRMT2AQ8IZ69 625 aaKnown RBP16.69■□□□□ 0.26
DDX39A-202ENST00000324340 CDCA7LQ96GN5 454 aa16.69■□□□□ 0.26
DDX39A-202ENST00000324340 PRDM11Q9NQV5 511 aa16.69■□□□□ 0.26
DDX39A-202ENST00000324340 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
DDX39A-202ENST00000324340 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-202ENST00000324340 RIPK4P57078 832 aa16.68■□□□□ 0.26
DDX39A-202ENST00000324340 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
DDX39A-202ENST00000324340 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
DDX39A-202ENST00000324340 PLEKHG2Q9H7P9 1386 aa16.67■□□□□ 0.26
DDX39A-202ENST00000324340 COL5A2P05997 1499 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-202ENST00000324340 E9PSI1 815 aa16.65■□□□□ 0.26
DDX39A-202ENST00000324340 PRKCSHP14314 528 aaPredicted RBP16.65■□□□□ 0.26
DDX39A-202ENST00000324340 LMOD3Q0VAK6 560 aa16.65■□□□□ 0.26
DDX39A-202ENST00000324340 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
DDX39A-202ENST00000324340 IL16Q14005 1332 aa16.65■□□□□ 0.26
DDX39A-202ENST00000324340 FAM83GA6ND36 823 aa16.64■□□□□ 0.26
DDX39A-202ENST00000324340 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.26
DDX39A-202ENST00000324340 MTHFSDQ2M296 383 aaKnown RBP16.64■□□□□ 0.25
DDX39A-202ENST00000324340 USHBP1Q8N6Y0 703 aa16.64■□□□□ 0.25
DDX39A-202ENST00000324340 GAS2L2Q8NHY3 880 aa16.64■□□□□ 0.25
DDX39A-202ENST00000324340 WDR17Q8IZU2 1322 aa16.63■□□□□ 0.25
DDX39A-202ENST00000324340 JCADQ9P266 1359 aa16.62■□□□□ 0.25
DDX39A-202ENST00000324340 ILDR2Q71H61 639 aa16.62■□□□□ 0.25
DDX39A-202ENST00000324340 PLCH1Q4KWH8 1693 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms