RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
CD28-201ENST00000324106 CDK13Q14004 1512 aaKnown RBP10.78□□□□□ -0.68
CD28-201ENST00000324106 FAM135AQ9P2D6 1515 aa10.78□□□□□ -0.68
CD28-201ENST00000324106 A0A0U1RQG5 324 aaPredicted RBP10.78□□□□□ -0.68
CD28-201ENST00000324106 CDC45O75419 566 aa10.77□□□□□ -0.68
CD28-201ENST00000324106 DNAJC2Q99543 621 aaKnown RBP10.77□□□□□ -0.68
CD28-201ENST00000324106 MYL6BP14649 208 aa10.77□□□□□ -0.69
CD28-201ENST00000324106 TIAM1Q13009 1591 aa10.77□□□□□ -0.69
CD28-201ENST00000324106 FBXO31Q5XUX0 539 aaPredicted RBP10.77□□□□□ -0.69
CD28-201ENST00000324106 RRS1Q15050 365 aaKnown RBP10.77□□□□□ -0.69
CD28-201ENST00000324106 CCDC73Q6ZRK6 1079 aa10.77□□□□□ -0.69
CD28-201ENST00000324106 WAPLQ7Z5K2 1190 aa10.77□□□□□ -0.69
CD28-201ENST00000324106 ZSCAN29Q8IWY8 852 aaPredicted RBP10.76□□□□□ -0.69
CD28-201ENST00000324106 BICD2Q8TD16 824 aa10.76□□□□□ -0.69
CD28-201ENST00000324106 GCC1Q96CN9 775 aa10.76□□□□□ -0.69
CD28-201ENST00000324106 PCMTD1Q96MG8 357 aaPredicted RBP10.76□□□□□ -0.69
CD28-201ENST00000324106 ZNF287Q9HBT7 754 aa10.76□□□□□ -0.69
CD28-201ENST00000324106 GZF1Q9H116 711 aaPredicted RBP10.76□□□□□ -0.69
CD28-201ENST00000324106 NFE2L2Q16236 605 aa10.76□□□□□ -0.69
CD28-201ENST00000324106 GOLGA6L3A6NEY3 463 aa10.75□□□□□ -0.69
CD28-201ENST00000324106 PDCP20941 246 aa10.75□□□□□ -0.69
CD28-201ENST00000324106 PDE3AQ14432 1141 aa10.75□□□□□ -0.69
CD28-201ENST00000324106 LARP1Q6PKG0 1096 aaKnown RBP10.75□□□□□ -0.69
CD28-201ENST00000324106 VPS37CA5D8V6 355 aaPredicted RBP10.75□□□□□ -0.69
CD28-201ENST00000324106 PTCD1O75127 700 aaKnown RBP10.75□□□□□ -0.69
CD28-201ENST00000324106 BICDL1Q6ZP65 573 aa10.75□□□□□ -0.69
CD28-201ENST00000324106 DDX49Q9Y6V7 483 aaKnown RBP10.75□□□□□ -0.69
CD28-201ENST00000324106 ATP2B2Q01814 1243 aa10.75□□□□□ -0.69
CD28-201ENST00000324106 PDE4CQ08493 712 aa10.75□□□□□ -0.69
CD28-201ENST00000324106 FOXD4L5Q5VV16 416 aaPredicted RBP10.75□□□□□ -0.69
CD28-201ENST00000324106 FOXD4L4Q8WXT5 416 aaPredicted RBP10.75□□□□□ -0.69
CD28-201ENST00000324106 BCL11BQ9C0K0 894 aaPredicted RBP10.75□□□□□ -0.69
CD28-201ENST00000324106 TXLNAP40222 546 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 NUCB2P80303 420 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 IPO9Q96P70 1041 aaKnown RBP10.74□□□□□ -0.69
CD28-201ENST00000324106 CCDC70Q6NSX1 233 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 AK7Q96M32 723 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.74□□□□□ -0.69
CD28-201ENST00000324106 IFIT1P09914 478 aaKnown RBP10.74□□□□□ -0.69
CD28-201ENST00000324106 TMEM132AQ24JP5 1023 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 CTNNA3Q9UI47 895 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 RBM19Q9Y4C8 960 aaKnown RBP10.74□□□□□ -0.69
CD28-201ENST00000324106 CAMSAP2Q08AD1 1489 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 A0A087WZG4 1122 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 MCM2P49736 904 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 MTMR7Q9Y216 660 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 AKAP2Q9Y2D5 859 aa10.74□□□□□ -0.69
CD28-201ENST00000324106 TRIM22Q8IYM9 498 aa10.73□□□□□ -0.69
CD28-201ENST00000324106 UHRF1BP1LA0JNW5 1464 aa10.73□□□□□ -0.69
CD28-201ENST00000324106 TTC21BQ7Z4L5 1316 aa10.73□□□□□ -0.69
CD28-201ENST00000324106 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
CD28-201ENST00000324106 CAVIN4Q5BKX8 364 aa10.73□□□□□ -0.69
CD28-201ENST00000324106 GOLGA6L1Q8N7Z2 621 aa10.73□□□□□ -0.69
CD28-201ENST00000324106 SLC4A3P48751 1232 aa10.73□□□□□ -0.69
CD28-201ENST00000324106 RRP12Q5JTH9 1297 aaKnown RBP10.73□□□□□ -0.69
CD28-201ENST00000324106 SLF2Q8IX21 1173 aa10.73□□□□□ -0.69
CD28-201ENST00000324106 TAF7Q15545 349 aaPredicted RBP10.73□□□□□ -0.69
CD28-201ENST00000324106 IFNL2Q8IZJ0 200 aa10.73□□□□□ -0.69
CD28-201ENST00000324106 PDE4AP27815 886 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 AMER1Q5JTC6 1135 aaPredicted RBP10.72□□□□□ -0.69
CD28-201ENST00000324106 SOGA3Q5TF21 947 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 MPRIPQ6WCQ1 1025 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 RPGRQ92834 1020 aaKnown RBP10.72□□□□□ -0.69
CD28-201ENST00000324106 CDK5RAP3Q96JB5 506 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 FMNL2Q96PY5 1086 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 LRP2BPQ9P2M1 347 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 ASXL2Q76L83 1435 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 NSD3Q9BZ95 1437 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 PANK1Q8TE04 598 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 LRRCC1Q9C099 1032 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 RAI14Q9P0K7 980 aa10.72□□□□□ -0.69
CD28-201ENST00000324106 SMARCC1Q92922 1105 aaPredicted RBP10.72□□□□□ -0.69
CD28-201ENST00000324106 CT47A1Q5JQC4 288 aaPredicted RBP10.71□□□□□ -0.69
CD28-201ENST00000324106 ODF2Q5BJF6 829 aa10.71□□□□□ -0.69
CD28-201ENST00000324106 ABCC11Q96J66 1382 aa10.71□□□□□ -0.7
CD28-201ENST00000324106 SRGAP3O43295 1099 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 OFD1O75665 1012 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 EPS15P42566 896 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 ANKRD1Q15327 319 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 NBPF8Q3BBV2 869 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 NBPF14Q5TI25 921 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 ATF7IPQ6VMQ6 1270 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 JMYQ8N9B5 988 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 METTL24Q5JXM2 366 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 RPAP2Q8IXW5 612 aaPredicted RBP10.7□□□□□ -0.7
CD28-201ENST00000324106 C19orf44Q9H6X5 657 aa10.7□□□□□ -0.7
CD28-201ENST00000324106 NCOA1Q15788 1441 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 TTC21AQ8NDW8 1320 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 TDO2P48775 406 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 NAIPQ13075 1403 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 SIL1Q9H173 461 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 C14orf93Q9H972 538 aaKnown RBP10.69□□□□□ -0.7
CD28-201ENST00000324106 PLCH2O75038 1416 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 FKBP4Q02790 459 aaKnown RBP eCLIP10.69□□□□□ -0.7
CD28-201ENST00000324106 LRRC59Q96AG4 307 aaKnown RBP10.69□□□□□ -0.7
CD28-201ENST00000324106 UBAC1Q9BSL1 405 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 CHMP5Q9NZZ3 219 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 NSD2O96028 1365 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 ZNF518AQ6AHZ1 1483 aa10.69□□□□□ -0.7
CD28-201ENST00000324106 MPHOSPH10O00566 681 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms