RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RGPD8O14715 1765 aaPredicted RBP10.49□□□□□ -0.73
CSTF3-201ENST00000323959 DAPK1P53355 1430 aa10.49□□□□□ -0.73
CSTF3-201ENST00000323959 PKD1L3Q7Z443 1732 aa10.49□□□□□ -0.73
CSTF3-201ENST00000323959 CCDC85CA6NKD9 419 aa10.48□□□□□ -0.73
CSTF3-201ENST00000323959 KIAA0232Q92628 1395 aa10.48□□□□□ -0.73
CSTF3-201ENST00000323959 EVA1CP58658 441 aa10.48□□□□□ -0.73
CSTF3-201ENST00000323959 AKT1S1Q96B36 256 aa10.48□□□□□ -0.73
CSTF3-201ENST00000323959 ZNF827Q17R98 1081 aa10.47□□□□□ -0.73
CSTF3-201ENST00000323959 KDM2BQ8NHM5 1336 aa10.47□□□□□ -0.73
CSTF3-201ENST00000323959 PITPNM2Q9BZ72 1349 aa10.47□□□□□ -0.73
CSTF3-201ENST00000323959 ZNF326Q5BKZ1 582 aaKnown RBP10.46□□□□□ -0.73
CSTF3-201ENST00000323959 CDCA7Q9BWT1 371 aaPredicted RBP10.46□□□□□ -0.74
CSTF3-201ENST00000323959 GPRASP1Q5JY77 1395 aa10.46□□□□□ -0.74
CSTF3-201ENST00000323959 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
CSTF3-201ENST00000323959 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
CSTF3-201ENST00000323959 DDB1Q16531 1140 aa10.44□□□□□ -0.74
CSTF3-201ENST00000323959 CRB1P82279 1406 aa10.44□□□□□ -0.74
CSTF3-201ENST00000323959 PTF1AQ7RTS3 328 aa10.44□□□□□ -0.74
CSTF3-201ENST00000323959 VIRMAQ69YN4 1812 aaKnown RBP10.44□□□□□ -0.74
CSTF3-201ENST00000323959 USP35Q9P2H5 1018 aa10.43□□□□□ -0.74
CSTF3-201ENST00000323959 CPDO75976 1380 aa10.43□□□□□ -0.74
CSTF3-201ENST00000323959 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
CSTF3-201ENST00000323959 KIF1BO60333 1816 aa10.43□□□□□ -0.74
CSTF3-201ENST00000323959 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
CSTF3-201ENST00000323959 LARP1Q6PKG0 1096 aaKnown RBP10.43□□□□□ -0.74
CSTF3-201ENST00000323959 HSPA8P11142 646 aaKnown RBP10.42□□□□□ -0.74
CSTF3-201ENST00000323959 ABCC11Q96J66 1382 aa10.42□□□□□ -0.74
CSTF3-201ENST00000323959 IGSF1Q8N6C5 1336 aa10.42□□□□□ -0.74
CSTF3-201ENST00000323959 SLC27A3Q5K4L6 730 aa10.42□□□□□ -0.74
CSTF3-201ENST00000323959 SIRT1Q96EB6 747 aa10.42□□□□□ -0.74
CSTF3-201ENST00000323959 ANKRD50Q9ULJ7 1429 aa10.41□□□□□ -0.74
CSTF3-201ENST00000323959 LBX1P52954 281 aa10.41□□□□□ -0.74
CSTF3-201ENST00000323959 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
CSTF3-201ENST00000323959 BTAF1O14981 1849 aa10.41□□□□□ -0.74
CSTF3-201ENST00000323959 COL5A2P05997 1499 aaPredicted RBP10.41□□□□□ -0.74
CSTF3-201ENST00000323959 CNTNAP1P78357 1384 aa10.4□□□□□ -0.74
CSTF3-201ENST00000323959 DLL1O00548 723 aa10.4□□□□□ -0.74
CSTF3-201ENST00000323959 MARCH10Q8NA82 808 aaPredicted RBP10.4□□□□□ -0.74
CSTF3-201ENST00000323959 WBP1LQ9NX94 342 aa10.4□□□□□ -0.74
CSTF3-201ENST00000323959 RPGRIP1LQ68CZ1 1315 aa10.39□□□□□ -0.75
CSTF3-201ENST00000323959 CHRNA2Q15822 529 aa10.39□□□□□ -0.75
CSTF3-201ENST00000323959 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
CSTF3-201ENST00000323959 COL18A1P39060 1754 aa10.38□□□□□ -0.75
CSTF3-201ENST00000323959 KCPQ6ZWJ8 1503 aa10.38□□□□□ -0.75
CSTF3-201ENST00000323959 ACIN1Q9UKV3 1341 aaKnown RBP10.38□□□□□ -0.75
CSTF3-201ENST00000323959 PPLO60437 1756 aa10.38□□□□□ -0.75
CSTF3-201ENST00000323959 QRICH2Q9H0J4 1663 aa10.37□□□□□ -0.75
CSTF3-201ENST00000323959 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
CSTF3-201ENST00000323959 ABCC6O95255 1503 aa10.36□□□□□ -0.75
CSTF3-201ENST00000323959 HMGB2P26583 209 aaKnown RBP10.36□□□□□ -0.75
CSTF3-201ENST00000323959 TFCP2L1Q9NZI6 479 aa10.35□□□□□ -0.75
CSTF3-201ENST00000323959 THSD7BQ9C0I4 1608 aa10.35□□□□□ -0.75
CSTF3-201ENST00000323959 RRAGCQ9HB90 399 aa10.34□□□□□ -0.75
CSTF3-201ENST00000323959 PLEKHH1Q9ULM0 1364 aa10.34□□□□□ -0.75
CSTF3-201ENST00000323959 ADAMTS7Q9UKP4 1686 aa10.34□□□□□ -0.75
CSTF3-201ENST00000323959 UTRNP46939 3433 aa10.34□□□□□ -0.75
CSTF3-201ENST00000323959 KIF13BQ9NQT8 1826 aa10.34□□□□□ -0.75
CSTF3-201ENST00000323959 WAPLQ7Z5K2 1190 aa10.33□□□□□ -0.76
CSTF3-201ENST00000323959 PDE4DIPQ5VU43 2346 aa10.33□□□□□ -0.76
CSTF3-201ENST00000323959 USP54Q70EL1 1684 aa10.33□□□□□ -0.76
CSTF3-201ENST00000323959 KIAA1551Q9HCM1 1747 aa10.33□□□□□ -0.76
CSTF3-201ENST00000323959 USP6P35125 1406 aa10.33□□□□□ -0.76
CSTF3-201ENST00000323959 LRRC4BQ9NT99 713 aa10.32□□□□□ -0.76
CSTF3-201ENST00000323959 LY75O60449 1722 aa10.32□□□□□ -0.76
CSTF3-201ENST00000323959 ARFGEF1Q9Y6D6 1849 aa10.32□□□□□ -0.76
CSTF3-201ENST00000323959 MKRN1Q9UHC7 482 aaKnown RBP10.32□□□□□ -0.76
CSTF3-201ENST00000323959 MAP2K1Q02750 393 aaPredicted RBP10.31□□□□□ -0.76
CSTF3-201ENST00000323959 ITSN1Q15811 1721 aa10.31□□□□□ -0.76
CSTF3-201ENST00000323959 FLAD1Q8NFF5 587 aa10.31□□□□□ -0.76
CSTF3-201ENST00000323959 ZC3H6P61129 1189 aaKnown RBP10.31□□□□□ -0.76
CSTF3-201ENST00000323959 HABP4Q5JVS0 413 aaKnown RBP10.31□□□□□ -0.76
CSTF3-201ENST00000323959 C9orf131Q5VYM1 1079 aa10.31□□□□□ -0.76
CSTF3-201ENST00000323959 CFAP44Q96MT7 982 aa10.3□□□□□ -0.76
CSTF3-201ENST00000323959 HIRIP3Q9BW71 556 aaPredicted RBP10.3□□□□□ -0.76
CSTF3-201ENST00000323959 SPATA31E1Q6ZUB1 1445 aa10.29□□□□□ -0.76
CSTF3-201ENST00000323959 VEGFAP15692 232 aaPredicted RBP10.29□□□□□ -0.76
CSTF3-201ENST00000323959 COL23A1Q86Y22 540 aaPredicted RBP10.27□□□□□ -0.76
CSTF3-201ENST00000323959 YTHDC2Q9H6S0 1430 aaKnown RBP10.27□□□□□ -0.76
CSTF3-201ENST00000323959 ARHGAP27Q6ZUM4 889 aa10.27□□□□□ -0.77
CSTF3-201ENST00000323959 MCOLN1Q9GZU1 580 aa10.27□□□□□ -0.77
CSTF3-201ENST00000323959 EXOC5O00471 708 aa10.26□□□□□ -0.77
CSTF3-201ENST00000323959 VEGFBP49765 207 aa10.26□□□□□ -0.77
CSTF3-201ENST00000323959 BRCA1P38398 1863 aaKnown RBP10.26□□□□□ -0.77
CSTF3-201ENST00000323959 NBPF15Q8N660 670 aa10.26□□□□□ -0.77
CSTF3-201ENST00000323959 CCDC7Q96M83 1385 aa10.25□□□□□ -0.77
CSTF3-201ENST00000323959 VPS8Q8N3P4 1428 aa10.25□□□□□ -0.77
CSTF3-201ENST00000323959 TGFB2P61812 414 aa10.25□□□□□ -0.77
CSTF3-201ENST00000323959 CHIC2Q9UKJ5 165 aa10.25□□□□□ -0.77
CSTF3-201ENST00000323959 MSH5O43196 834 aa10.24□□□□□ -0.77
CSTF3-201ENST00000323959 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
CSTF3-201ENST00000323959 WDR17Q8IZU2 1322 aa10.24□□□□□ -0.77
CSTF3-201ENST00000323959 MSL1Q68DK7 614 aa10.24□□□□□ -0.77
CSTF3-201ENST00000323959 STK26Q9P289 416 aa10.24□□□□□ -0.77
CSTF3-201ENST00000323959 NSD3Q9BZ95 1437 aa10.23□□□□□ -0.77
CSTF3-201ENST00000323959 TNRC18O15417 2968 aaPredicted RBP10.23□□□□□ -0.77
CSTF3-201ENST00000323959 TOM1L2Q6ZVM7 507 aa10.23□□□□□ -0.77
CSTF3-201ENST00000323959 CARD10Q9BWT7 1032 aa10.23□□□□□ -0.77
CSTF3-201ENST00000323959 CHADLQ6NUI6 762 aa10.22□□□□□ -0.77
CSTF3-201ENST00000323959 NGDNQ8NEJ9 315 aaKnown RBP10.22□□□□□ -0.77
CSTF3-201ENST00000323959 SBF1O95248 1867 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms