RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 LETM1O95202 739 aaPredicted RBP9.61□□□□□ -0.87
CD46-201ENST00000322875 MORC1Q86VD1 984 aa9.61□□□□□ -0.87
CD46-201ENST00000322875 NSFL1CQ9UNZ2 370 aaKnown RBP9.61□□□□□ -0.87
CD46-201ENST00000322875 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.61□□□□□ -0.87
CD46-201ENST00000322875 MTHFSP49914 203 aa9.61□□□□□ -0.87
CD46-201ENST00000322875 FAM69CQ0P6D2 419 aa9.61□□□□□ -0.87
CD46-201ENST00000322875 ZCCHC11Q5TAX3 1644 aaKnown RBP9.61□□□□□ -0.87
CD46-201ENST00000322875 KNDC1Q76NI1 1749 aa9.61□□□□□ -0.87
CD46-201ENST00000322875 ZBTB7BO15156 539 aaPredicted RBP9.6□□□□□ -0.87
CD46-201ENST00000322875 KIAA2012Q0VF49 1180 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 ATP2B3Q16720 1220 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 SPTLC3Q9NUV7 552 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 MROH2AA6NES4 1674 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 ALDH1L2Q3SY69 923 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 PIBF1Q8WXW3 757 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 JARID2Q92833 1246 aaPredicted RBP9.6□□□□□ -0.87
CD46-201ENST00000322875 CDC45O75419 566 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 GSPT1P15170 499 aaKnown RBP9.6□□□□□ -0.87
CD46-201ENST00000322875 PTCH1Q13635 1447 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 ASXL2Q76L83 1435 aa9.6□□□□□ -0.87
CD46-201ENST00000322875 PRPF40AO75400 957 aaKnown RBP9.59□□□□□ -0.87
CD46-201ENST00000322875 SIRT2Q8IXJ6 389 aa9.59□□□□□ -0.87
CD46-201ENST00000322875 USP26Q9BXU7 913 aa9.59□□□□□ -0.87
CD46-201ENST00000322875 NSD2O96028 1365 aa9.59□□□□□ -0.87
CD46-201ENST00000322875 ABCC1P33527 1531 aa9.59□□□□□ -0.87
CD46-201ENST00000322875 SYCE3A1L190 88 aa9.59□□□□□ -0.87
CD46-201ENST00000322875 GTF2E1P29083 439 aaPredicted RBP9.59□□□□□ -0.87
CD46-201ENST00000322875 CFAP70Q5T0N1 1121 aa9.58□□□□□ -0.88
CD46-201ENST00000322875 ADGRB1O14514 1584 aa9.58□□□□□ -0.88
CD46-201ENST00000322875 KIF1BO60333 1816 aa9.58□□□□□ -0.88
CD46-201ENST00000322875 IPO8O15397 1037 aaKnown RBP9.58□□□□□ -0.88
CD46-201ENST00000322875 NCLP19338 710 aaKnown RBP9.58□□□□□ -0.88
CD46-201ENST00000322875 TMPOP42166 694 aaKnown RBP9.58□□□□□ -0.88
CD46-201ENST00000322875 FKBP5Q13451 457 aaPredicted RBP9.58□□□□□ -0.88
CD46-201ENST00000322875 ANKRD26Q9UPS8 1709 aa9.57□□□□□ -0.88
CD46-201ENST00000322875 ANKRD7Q92527 254 aa9.57□□□□□ -0.88
CD46-201ENST00000322875 CDC42BPGQ6DT37 1551 aa9.57□□□□□ -0.88
CD46-201ENST00000322875 MBD3O95983 291 aa9.57□□□□□ -0.88
CD46-201ENST00000322875 ANKRD45Q5TZF3 282 aa9.57□□□□□ -0.88
CD46-201ENST00000322875 ZGPATQ8N5A5 531 aaKnown RBP9.57□□□□□ -0.88
CD46-201ENST00000322875 CFAP53Q96M91 514 aa9.57□□□□□ -0.88
CD46-201ENST00000322875 ARID3AQ99856 593 aa9.57□□□□□ -0.88
CD46-201ENST00000322875 NOLC1Q14978 699 aaKnown RBP eCLIP9.57□□□□□ -0.882e-8■■■□□ 18.1
CD46-201ENST00000322875 TSC1Q92574 1164 aa9.57□□□□□ -0.88
CD46-201ENST00000322875 ADGRF5Q8IZF2 1346 aa9.56□□□□□ -0.88
CD46-201ENST00000322875 CBX1P83916 185 aa9.56□□□□□ -0.88
CD46-201ENST00000322875 PLEKHM2Q8IWE5 1019 aa9.56□□□□□ -0.88
CD46-201ENST00000322875 MROH1Q8NDA8 1641 aa9.56□□□□□ -0.88
CD46-201ENST00000322875 ZFYVE16Q7Z3T8 1539 aa9.56□□□□□ -0.88
CD46-201ENST00000322875 UVSSAQ2YD98 709 aa9.56□□□□□ -0.88
CD46-201ENST00000322875 ARHGAP45Q92619 1136 aa9.56□□□□□ -0.88
CD46-201ENST00000322875 CFAP44Q96MT7 982 aa9.56□□□□□ -0.88
CD46-201ENST00000322875 ZNF428Q96B54 188 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 SLC12A5Q9H2X9 1139 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 BCL2L12Q9HB09 334 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 TMEM51Q9NW97 253 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 UGGT1Q9NYU2 1555 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 CTIFO43310 598 aaKnown RBP9.55□□□□□ -0.88
CD46-201ENST00000322875 PUS7Q96PZ0 661 aaKnown RBP9.55□□□□□ -0.88
CD46-201ENST00000322875 TSPY26PQ9H489 355 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 TUBGCP6Q96RT7 1819 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 BRD1O95696 1058 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 CHAMP1Q96JM3 812 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 KIF3AQ9Y496 699 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 ABCC4O15439 1325 aa9.55□□□□□ -0.88
CD46-201ENST00000322875 U2AF1L5P0DN76 240 aaPredicted RBP9.54□□□□□ -0.88
CD46-201ENST00000322875 TNNT2P45379 298 aaPredicted RBP9.54□□□□□ -0.88
CD46-201ENST00000322875 U2AF1Q01081 240 aaKnown RBP eCLIP9.54□□□□□ -0.886e-10■■■□□ 18.8
CD46-201ENST00000322875 TTC22Q5TAA0 569 aa9.54□□□□□ -0.88
CD46-201ENST00000322875 PLCH2O75038 1416 aa9.54□□□□□ -0.88
CD46-201ENST00000322875 ADGRB3O60242 1522 aa9.54□□□□□ -0.88
CD46-201ENST00000322875 PPLO60437 1756 aa9.54□□□□□ -0.88
CD46-201ENST00000322875 ANKRD36BQ8N2N9 1353 aa9.54□□□□□ -0.88
CD46-201ENST00000322875 TULP4Q9NRJ4 1543 aa9.54□□□□□ -0.88
CD46-201ENST00000322875 TSPOAP1O95153 1857 aa9.54□□□□□ -0.88
CD46-201ENST00000322875 TAF3Q5VWG9 929 aa9.53□□□□□ -0.88
CD46-201ENST00000322875 FANCAO15360 1455 aa9.53□□□□□ -0.88
CD46-201ENST00000322875 KIF24Q5T7B8 1368 aa9.53□□□□□ -0.88
CD46-201ENST00000322875 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
CD46-201ENST00000322875 KLHL34Q8N239 644 aa9.53□□□□□ -0.88
CD46-201ENST00000322875 MRPL50Q8N5N7 158 aaKnown RBP9.53□□□□□ -0.88
CD46-201ENST00000322875 FAM184AQ8NB25 1140 aa9.53□□□□□ -0.88
CD46-201ENST00000322875 RNF214Q8ND24 703 aa9.53□□□□□ -0.88
CD46-201ENST00000322875 BBXQ8WY36 941 aaPredicted RBP9.53□□□□□ -0.88
CD46-201ENST00000322875 CUL4AQ13619 759 aa9.52□□□□□ -0.89
CD46-201ENST00000322875 PNPLA6Q8IY17 1366 aa9.52□□□□□ -0.89
CD46-201ENST00000322875 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.89
CD46-201ENST00000322875 IL17RAQ96F46 866 aa9.52□□□□□ -0.89
CD46-201ENST00000322875 ST18O60284 1047 aa9.51□□□□□ -0.89
CD46-201ENST00000322875 FEZ1Q99689 392 aa9.51□□□□□ -0.89
CD46-201ENST00000322875 DCTPP1Q9H773 170 aa9.51□□□□□ -0.89
CD46-201ENST00000322875 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
CD46-201ENST00000322875 PDCL2Q8N4E4 241 aa9.51□□□□□ -0.89
CD46-201ENST00000322875 EFCAB6Q5THR3 1501 aa9.51□□□□□ -0.89
CD46-201ENST00000322875 PDE4CQ08493 712 aa9.51□□□□□ -0.89
CD46-201ENST00000322875 TMEM87AQ8NBN3 555 aa9.51□□□□□ -0.89
CD46-201ENST00000322875 KIAA1524Q8TCG1 905 aa9.51□□□□□ -0.89
CD46-201ENST00000322875 LRRC7Q96NW7 1537 aa9.5□□□□□ -0.89
CD46-201ENST00000322875 SYCP1Q15431 976 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms