RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 HNRNPMP52272 730 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL12A1-201ENST00000322507 C22orf23Q9BZE7 217 aa11.45□□□□□ -0.58
COL12A1-201ENST00000322507 CCDC6Q16204 474 aa11.45□□□□□ -0.58
COL12A1-201ENST00000322507 A0A1B0GUA9 196 aa11.45□□□□□ -0.58
COL12A1-201ENST00000322507 CCDC112Q8NEF3 446 aa11.45□□□□□ -0.58
COL12A1-201ENST00000322507 OFD1O75665 1012 aa11.44□□□□□ -0.58
COL12A1-201ENST00000322507 ARHGAP5Q13017 1502 aa11.44□□□□□ -0.58
COL12A1-201ENST00000322507 RBM10P98175 930 aaKnown RBP11.44□□□□□ -0.58
COL12A1-201ENST00000322507 FILIP1LQ4L180 1135 aa11.44□□□□□ -0.58
COL12A1-201ENST00000322507 POLA1P09884 1462 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-201ENST00000322507 SRCIN1Q9C0H9 1055 aa11.44□□□□□ -0.58
COL12A1-201ENST00000322507 PPP1R1BQ9UD71 204 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-201ENST00000322507 SYNJ2O15056 1496 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 ANKRD18BA2A2Z9 1011 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 RSRC1Q96IZ7 334 aaKnown RBP11.43□□□□□ -0.58
COL12A1-201ENST00000322507 KLHL10Q6JEL2 608 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 LRCH2Q5VUJ6 765 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 NOL8Q76FK4 1167 aaKnown RBP11.43□□□□□ -0.58
COL12A1-201ENST00000322507 GAS2L2Q8NHY3 880 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 NAP1L3Q99457 506 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-201ENST00000322507 RIPK4P57078 832 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 PDE3AQ14432 1141 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 FKBP5Q13451 457 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-201ENST00000322507 STIM1Q13586 685 aa11.43□□□□□ -0.58
COL12A1-201ENST00000322507 TRAK1Q9UPV9 953 aa11.42□□□□□ -0.58
COL12A1-201ENST00000322507 ANKRD50Q9ULJ7 1429 aa11.42□□□□□ -0.58
COL12A1-201ENST00000322507 CEP83Q9Y592 693 aa11.42□□□□□ -0.58
COL12A1-201ENST00000322507 NBPF1Q3BBV0 1214 aa11.41□□□□□ -0.58
COL12A1-201ENST00000322507 TMCO3Q6UWJ1 677 aa11.41□□□□□ -0.58
COL12A1-201ENST00000322507 FGD5Q6ZNL6 1462 aa11.41□□□□□ -0.58
COL12A1-201ENST00000322507 NOL3O60936 208 aaKnown RBP11.41□□□□□ -0.58
COL12A1-201ENST00000322507 LIMCH1Q9UPQ0 1083 aa11.41□□□□□ -0.58
COL12A1-201ENST00000322507 HSP90AB2PQ58FF8 381 aa11.41□□□□□ -0.58
COL12A1-201ENST00000322507 TTC31Q49AM3 519 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-201ENST00000322507 CRBNQ96SW2 442 aa11.41□□□□□ -0.58
COL12A1-201ENST00000322507 SDF4Q9BRK5 362 aa11.41□□□□□ -0.58
COL12A1-201ENST00000322507 WWC2Q6AWC2 1192 aa11.41□□□□□ -0.58
COL12A1-201ENST00000322507 C6orf163Q5TEZ5 329 aa11.4□□□□□ -0.58
COL12A1-201ENST00000322507 FMNL3Q8IVF7 1028 aa11.4□□□□□ -0.58
COL12A1-201ENST00000322507 UBTFL1P0CB47 393 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-201ENST00000322507 CCDC30Q5VVM6 783 aa11.4□□□□□ -0.58
COL12A1-201ENST00000322507 DDX23Q9BUQ8 820 aaKnown RBP11.4□□□□□ -0.58
COL12A1-201ENST00000322507 CDKL5O76039 1030 aa11.4□□□□□ -0.58
COL12A1-201ENST00000322507 SMC6Q96SB8 1091 aa11.4□□□□□ -0.58
COL12A1-201ENST00000322507 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL12A1-201ENST00000322507 PSME1Q06323 249 aa11.4□□□□□ -0.58
COL12A1-201ENST00000322507 MAGEC2Q9UBF1 373 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-201ENST00000322507 CCDC174Q6PII3 467 aa11.4□□□□□ -0.58
COL12A1-201ENST00000322507 FMNL2Q96PY5 1086 aa11.4□□□□□ -0.58
COL12A1-201ENST00000322507 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
COL12A1-201ENST00000322507 CCDC141Q6ZP82 1450 aa11.4□□□□□ -0.58
COL12A1-201ENST00000322507 C10orf67Q8IYJ2 551 aa11.4□□□□□ -0.59
COL12A1-201ENST00000322507 DESP17661 470 aa11.39□□□□□ -0.59
COL12A1-201ENST00000322507 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-201ENST00000322507 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-201ENST00000322507 COG6Q9Y2V7 657 aa11.39□□□□□ -0.59
COL12A1-201ENST00000322507 DYNC1I1O14576 645 aa11.39□□□□□ -0.59
COL12A1-201ENST00000322507 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL12A1-201ENST00000322507 TOP2BQ02880 1626 aa11.39□□□□□ -0.59
COL12A1-201ENST00000322507 USH1CQ9Y6N9 552 aa11.39□□□□□ -0.59
COL12A1-201ENST00000322507 GCOM1H8Y6P7 765 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-201ENST00000322507 CHMP2AO43633 222 aa11.39□□□□□ -0.59
COL12A1-201ENST00000322507 MYZAPP0CAP1 466 aa11.39□□□□□ -0.59
COL12A1-201ENST00000322507 CCDC192P0DO97 292 aa11.39□□□□□ -0.59
COL12A1-201ENST00000322507 SPECC1LQ69YQ0 1117 aa11.39□□□□□ -0.59
COL12A1-201ENST00000322507 MYCBPQ99417 103 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-201ENST00000322507 CBFA2T2O43439 604 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 BMS1Q14692 1282 aaKnown RBP11.38□□□□□ -0.59
COL12A1-201ENST00000322507 SYCP1Q15431 976 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 RAPGEF4Q8WZA2 1011 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 RNF8O76064 485 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 GPRASP1Q5JY77 1395 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 ZSCAN25Q6NSZ9 544 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 BANK1Q8NDB2 785 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 PNISRQ8TF01 805 aaKnown RBP11.38□□□□□ -0.59
COL12A1-201ENST00000322507 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 CCT4P50991 539 aaKnown RBP11.38□□□□□ -0.59
COL12A1-201ENST00000322507 GBP6Q6ZN66 633 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 DNAI2Q9GZS0 605 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 TRIM21P19474 475 aaKnown RBP11.38□□□□□ -0.59
COL12A1-201ENST00000322507 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 MAP2K1Q02750 393 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-201ENST00000322507 KRI1Q8N9T8 703 aaKnown RBP11.38□□□□□ -0.59
COL12A1-201ENST00000322507 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 CFAP45Q9UL16 551 aa11.38□□□□□ -0.59
COL12A1-201ENST00000322507 SATB2Q9UPW6 733 aa11.37□□□□□ -0.59
COL12A1-201ENST00000322507 NUP133Q8WUM0 1156 aa11.37□□□□□ -0.59
COL12A1-201ENST00000322507 NCOA2Q15596 1464 aa11.37□□□□□ -0.59
COL12A1-201ENST00000322507 PPP1R12BO60237 982 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-201ENST00000322507 WDR33Q9C0J8 1336 aaKnown RBP11.37□□□□□ -0.59
COL12A1-201ENST00000322507 PLEKHH1Q9ULM0 1364 aa11.37□□□□□ -0.59
COL12A1-201ENST00000322507 HSPA4P34932 840 aa11.37□□□□□ -0.59
COL12A1-201ENST00000322507 AP1ARQ63HQ0 302 aa11.37□□□□□ -0.59
COL12A1-201ENST00000322507 LTV1Q96GA3 475 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-201ENST00000322507 TRIM22Q8IYM9 498 aa11.37□□□□□ -0.59
COL12A1-201ENST00000322507 STMN1P16949 149 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 DBN1Q16643 649 aa11.36□□□□□ -0.59
COL12A1-201ENST00000322507 ZC4H2Q9NQZ6 224 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms