RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 PRAG1Q86YV5 1406 aa22.35■■□□□ 1.17
LTBP3-202ENST00000322147 CDK11BP21127 795 aaKnown RBP22.35■■□□□ 1.17
LTBP3-202ENST00000322147 FIBPO43427 364 aa22.35■■□□□ 1.17
LTBP3-202ENST00000322147 GCC1Q96CN9 775 aa22.35■■□□□ 1.17
LTBP3-202ENST00000322147 TRAPPC8Q9Y2L5 1435 aa22.35■■□□□ 1.17
LTBP3-202ENST00000322147 SRGAP3O43295 1099 aa22.35■■□□□ 1.17
LTBP3-202ENST00000322147 GNAI3P08754 354 aa22.34■■□□□ 1.17
LTBP3-202ENST00000322147 SKOR2Q2VWA4 1001 aaPredicted RBP22.34■■□□□ 1.17
LTBP3-202ENST00000322147 GAS2L2Q8NHY3 880 aa22.34■■□□□ 1.17
LTBP3-202ENST00000322147 DNAJC2Q99543 621 aaKnown RBP22.34■■□□□ 1.17
LTBP3-202ENST00000322147 INSRP06213 1382 aa22.34■■□□□ 1.17
LTBP3-202ENST00000322147 STRN4Q9NRL3 753 aa22.33■■□□□ 1.17
LTBP3-202ENST00000322147 FOXO3O43524 673 aa22.33■■□□□ 1.17
LTBP3-202ENST00000322147 NRDCO43847 1150 aa22.33■■□□□ 1.17
LTBP3-202ENST00000322147 DDX58O95786 925 aaKnown RBP22.33■■□□□ 1.17
LTBP3-202ENST00000322147 PROSER2Q86WR7 435 aaPredicted RBP22.33■■□□□ 1.17
LTBP3-202ENST00000322147 BICD2Q8TD16 824 aa22.33■■□□□ 1.17
LTBP3-202ENST00000322147 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.16
LTBP3-202ENST00000322147 HSP90AB2PQ58FF8 381 aa22.33■■□□□ 1.16
LTBP3-202ENST00000322147 AEBP1Q8IUX7 1158 aa22.33■■□□□ 1.16
LTBP3-202ENST00000322147 GOLGA6L6A8MZA4 724 aa22.32■■□□□ 1.16
LTBP3-202ENST00000322147 NUCB2P80303 420 aa22.32■■□□□ 1.16
LTBP3-202ENST00000322147 CEBPZQ03701 1054 aaKnown RBP22.32■■□□□ 1.16
LTBP3-202ENST00000322147 RUFY2Q8WXA3 655 aa22.32■■□□□ 1.16
LTBP3-202ENST00000322147 FSD1Q9BTV5 496 aa22.32■■□□□ 1.16
LTBP3-202ENST00000322147 NASPP49321 788 aaPredicted RBP22.32■■□□□ 1.16
LTBP3-202ENST00000322147 FAM13BQ9NYF5 915 aa22.32■■□□□ 1.16
LTBP3-202ENST00000322147 STK3Q13188 491 aa22.31■■□□□ 1.16
LTBP3-202ENST00000322147 ANTXR1Q9H6X2 564 aa22.31■■□□□ 1.16
LTBP3-202ENST00000322147 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
LTBP3-202ENST00000322147 COL17A1Q9UMD9 1497 aaPredicted RBP22.31■■□□□ 1.16
LTBP3-202ENST00000322147 AAMPQ13685 434 aa22.31■■□□□ 1.16
LTBP3-202ENST00000322147 ATAD2Q6PL18 1390 aa22.31■■□□□ 1.16
LTBP3-202ENST00000322147 ATF3P18847 181 aa22.29■■□□□ 1.16
LTBP3-202ENST00000322147 CWC27Q6UX04 472 aaKnown RBP22.29■■□□□ 1.16
LTBP3-202ENST00000322147 STK11IPQ8N1F8 1099 aa22.29■■□□□ 1.16
LTBP3-202ENST00000322147 RPGRIP1LQ68CZ1 1315 aa22.29■■□□□ 1.16
LTBP3-202ENST00000322147 TSPYL6Q8N831 410 aa22.29■■□□□ 1.16
LTBP3-202ENST00000322147 ZNF521Q96K83 1311 aa22.29■■□□□ 1.16
LTBP3-202ENST00000322147 WASHC4Q2M389 1173 aa22.28■■□□□ 1.16
LTBP3-202ENST00000322147 ZNF592Q92610 1267 aa22.28■■□□□ 1.16
LTBP3-202ENST00000322147 SCAF11Q99590 1463 aaKnown RBP22.28■■□□□ 1.16
LTBP3-202ENST00000322147 LRRCC1Q9C099 1032 aa22.28■■□□□ 1.16
LTBP3-202ENST00000322147 RBM42Q9BTD8 480 aaKnown RBP22.28■■□□□ 1.16
LTBP3-202ENST00000322147 SRCIN1Q9C0H9 1055 aa22.28■■□□□ 1.16
LTBP3-202ENST00000322147 FANCAO15360 1455 aa22.28■■□□□ 1.16
LTBP3-202ENST00000322147 PHACTR3Q96KR7 559 aa22.27■■□□□ 1.16
LTBP3-202ENST00000322147 K7ELQ4 463 aaPredicted RBP22.27■■□□□ 1.16
LTBP3-202ENST00000322147 MBIPQ9NS73 344 aa22.27■■□□□ 1.16
LTBP3-202ENST00000322147 BECN2A8MW95 431 aa22.26■■□□□ 1.15
LTBP3-202ENST00000322147 MPRIPQ6WCQ1 1025 aa22.26■■□□□ 1.15
LTBP3-202ENST00000322147 WASLO00401 505 aaPredicted RBP22.26■■□□□ 1.15
LTBP3-202ENST00000322147 JARID2Q92833 1246 aaPredicted RBP22.25■■□□□ 1.15
LTBP3-202ENST00000322147 SYCP2Q9BX26 1530 aa22.25■■□□□ 1.15
LTBP3-202ENST00000322147 FSD2A1L4K1 749 aa22.25■■□□□ 1.15
LTBP3-202ENST00000322147 C16orf71Q8IYS4 520 aaPredicted RBP22.25■■□□□ 1.15
LTBP3-202ENST00000322147 ADGRL2O95490 1459 aa22.25■■□□□ 1.15
LTBP3-202ENST00000322147 HTATSF1O43719 755 aaKnown RBP22.25■■□□□ 1.15
LTBP3-202ENST00000322147 RASSF8Q8NHQ8 419 aa22.24■■□□□ 1.15
LTBP3-202ENST00000322147 ERC2O15083 957 aa22.24■■□□□ 1.15
LTBP3-202ENST00000322147 PHF14O94880 888 aa22.24■■□□□ 1.15
LTBP3-202ENST00000322147 AMOTL2Q9Y2J4 779 aa22.24■■□□□ 1.15
LTBP3-202ENST00000322147 C8orf58Q8NAV2 365 aa22.24■■□□□ 1.15
LTBP3-202ENST00000322147 CPLX1O14810 134 aa22.23■■□□□ 1.15
LTBP3-202ENST00000322147 PPFIA3O75145 1194 aa22.23■■□□□ 1.15
LTBP3-202ENST00000322147 RABEP1Q15276 862 aa22.23■■□□□ 1.15
LTBP3-202ENST00000322147 CHMP4CQ96CF2 233 aa22.23■■□□□ 1.15
LTBP3-202ENST00000322147 ATP6V1DQ9Y5K8 247 aa22.23■■□□□ 1.15
LTBP3-202ENST00000322147 PTCD1O75127 700 aaKnown RBP22.23■■□□□ 1.15
LTBP3-202ENST00000322147 ATP2B1P20020 1258 aa22.23■■□□□ 1.15
LTBP3-202ENST00000322147 THEMISQ8N1K5 641 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-202ENST00000322147 NINLQ9Y2I6 1382 aa22.23■■□□□ 1.15
LTBP3-202ENST00000322147 FERMT3Q86UX7 667 aa22.22■■□□□ 1.15
LTBP3-202ENST00000322147 MTMR7Q9Y216 660 aa22.22■■□□□ 1.15
LTBP3-202ENST00000322147 GDPD2Q9HCC8 539 aa22.22■■□□□ 1.15
LTBP3-202ENST00000322147 TPM2P07951 284 aa22.22■■□□□ 1.15
LTBP3-202ENST00000322147 CNTROBQ8N137 903 aa22.22■■□□□ 1.15
LTBP3-202ENST00000322147 PLEKHO1Q53GL0 409 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-202ENST00000322147 CT47B1P0C2W7 299 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-202ENST00000322147 TAF7Q15545 349 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-202ENST00000322147 R3HCC1Q9Y3T6 440 aaKnown RBP22.21■■□□□ 1.15
LTBP3-202ENST00000322147 PES1O00541 588 aaKnown RBP22.21■■□□□ 1.15
LTBP3-202ENST00000322147 SSFA2P28290 1259 aa22.21■■□□□ 1.15
LTBP3-202ENST00000322147 GOLGA6L19H0YKK7 550 aa22.2■■□□□ 1.14
LTBP3-202ENST00000322147 TRMT2AQ8IZ69 625 aaKnown RBP22.2■■□□□ 1.14
LTBP3-202ENST00000322147 FMNL2Q96PY5 1086 aa22.2■■□□□ 1.14
LTBP3-202ENST00000322147 MEIS3Q99687 375 aa22.2■■□□□ 1.14
LTBP3-202ENST00000322147 DTNBO60941 627 aa22.2■■□□□ 1.14
LTBP3-202ENST00000322147 RBM10P98175 930 aaKnown RBP22.2■■□□□ 1.14
LTBP3-202ENST00000322147 CSPP1Q1MSJ5 1256 aa22.2■■□□□ 1.14
LTBP3-202ENST00000322147 BTBD11A6QL63 1104 aa22.19■■□□□ 1.14
LTBP3-202ENST00000322147 CCT4P50991 539 aaKnown RBP22.19■■□□□ 1.14
LTBP3-202ENST00000322147 RNF20Q5VTR2 975 aa22.19■■□□□ 1.14
LTBP3-202ENST00000322147 LRRFIP2Q9Y608 721 aaKnown RBP22.19■■□□□ 1.14
LTBP3-202ENST00000322147 HSP90AB4PQ58FF6 505 aa22.19■■□□□ 1.14
LTBP3-202ENST00000322147 AACSQ86V21 672 aa22.19■■□□□ 1.14
LTBP3-202ENST00000322147 TBC1D9Q6ZT07 1266 aa22.18■■□□□ 1.14
LTBP3-202ENST00000322147 RAPGEF6Q8TEU7 1601 aa22.18■■□□□ 1.14
LTBP3-202ENST00000322147 POLKQ9UBT6 870 aa22.17■■□□□ 1.14
LTBP3-202ENST00000322147 TNPO1Q92973 898 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms