RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 PRDM4Q9UKN5 801 aa19.91■□□□□ 0.78
PACS1-201ENST00000320580 POLR3GO15318 223 aaPredicted RBP19.91■□□□□ 0.78
PACS1-201ENST00000320580 CHD1O14646 1710 aa19.91■□□□□ 0.78
PACS1-201ENST00000320580 ERC2O15083 957 aa19.9■□□□□ 0.78
PACS1-201ENST00000320580 RIOK3O14730 519 aaKnown RBP19.9■□□□□ 0.78
PACS1-201ENST00000320580 SPATA31E1Q6ZUB1 1445 aa19.9■□□□□ 0.78
PACS1-201ENST00000320580 UVSSAQ2YD98 709 aa19.89■□□□□ 0.78
PACS1-201ENST00000320580 NOL10Q9BSC4 688 aaKnown RBP19.89■□□□□ 0.78
PACS1-201ENST00000320580 PIBF1Q8WXW3 757 aa19.89■□□□□ 0.77
PACS1-201ENST00000320580 DISP3Q9P2K9 1392 aa19.89■□□□□ 0.77
PACS1-201ENST00000320580 IPO4Q8TEX9 1081 aaKnown RBP19.88■□□□□ 0.77
PACS1-201ENST00000320580 ZGPATQ8N5A5 531 aaKnown RBP19.88■□□□□ 0.77
PACS1-201ENST00000320580 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.88■□□□□ 0.77
PACS1-201ENST00000320580 V9GYY5 206 aaPredicted RBP19.88■□□□□ 0.77
PACS1-201ENST00000320580 FILIP1Q7Z7B0 1213 aa19.88■□□□□ 0.77
PACS1-201ENST00000320580 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
PACS1-201ENST00000320580 HDAC1Q13547 482 aaPredicted RBP19.87■□□□□ 0.77
PACS1-201ENST00000320580 PTPN14Q15678 1187 aa19.87■□□□□ 0.77
PACS1-201ENST00000320580 LEKR1Q6ZMV7 388 aa19.87■□□□□ 0.77
PACS1-201ENST00000320580 HSP90B1P14625 803 aaKnown RBP19.87■□□□□ 0.77
PACS1-201ENST00000320580 SETQ01105 290 aaPredicted RBP19.87■□□□□ 0.77
PACS1-201ENST00000320580 AK7Q96M32 723 aa19.87■□□□□ 0.77
PACS1-201ENST00000320580 ROCK1Q13464 1354 aa19.86■□□□□ 0.77
PACS1-201ENST00000320580 LMBRD1Q9NUN5 540 aa19.86■□□□□ 0.77
PACS1-201ENST00000320580 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
PACS1-201ENST00000320580 CT47B1P0C2W7 299 aaPredicted RBP19.86■□□□□ 0.77
PACS1-201ENST00000320580 UPF3BQ9BZI7 483 aaKnown RBP19.86■□□□□ 0.77
PACS1-201ENST00000320580 SKIDA1Q1XH10 827 aa19.85■□□□□ 0.77
PACS1-201ENST00000320580 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.85■□□□□ 0.77
PACS1-201ENST00000320580 NUCB1Q02818 461 aa19.84■□□□□ 0.77
PACS1-201ENST00000320580 STK26Q9P289 416 aa19.84■□□□□ 0.77
PACS1-201ENST00000320580 ASXL2Q76L83 1435 aa19.84■□□□□ 0.77
PACS1-201ENST00000320580 H3BQV1 296 aa19.84■□□□□ 0.77
PACS1-201ENST00000320580 IFFO2Q5TF58 517 aa19.84■□□□□ 0.77
PACS1-201ENST00000320580 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
PACS1-201ENST00000320580 TMEM63CQ9P1W3 806 aa19.84■□□□□ 0.77
PACS1-201ENST00000320580 GABPB1Q06547 395 aaPredicted RBP19.83■□□□□ 0.77
PACS1-201ENST00000320580 TNMDQ9H2S6 317 aa19.83■□□□□ 0.77
PACS1-201ENST00000320580 CCDC141Q6ZP82 1450 aa19.83■□□□□ 0.77
PACS1-201ENST00000320580 CAMK4Q16566 473 aa19.83■□□□□ 0.77
PACS1-201ENST00000320580 DEF6Q9H4E7 631 aa19.83■□□□□ 0.77
PACS1-201ENST00000320580 GPATCH11Q8N954 259 aa19.83■□□□□ 0.76
PACS1-201ENST00000320580 TRMT1Q9NXH9 659 aaKnown RBP19.83■□□□□ 0.76
PACS1-201ENST00000320580 GIMAP6Q6P9H5 292 aa19.82■□□□□ 0.76
PACS1-201ENST00000320580 JARID2Q92833 1246 aaPredicted RBP19.82■□□□□ 0.76
PACS1-201ENST00000320580 ZFP91Q96JP5 570 aaPredicted RBP19.82■□□□□ 0.76
PACS1-201ENST00000320580 ZMYM4Q5VZL5 1548 aa19.82■□□□□ 0.76
PACS1-201ENST00000320580 TMCO3Q6UWJ1 677 aa19.82■□□□□ 0.76
PACS1-201ENST00000320580 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
PACS1-201ENST00000320580 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.81■□□□□ 0.76
PACS1-201ENST00000320580 KIF18AQ8NI77 898 aa19.81■□□□□ 0.76
PACS1-201ENST00000320580 UBXN4Q92575 508 aa19.81■□□□□ 0.76
PACS1-201ENST00000320580 NUP62CLQ9H1M0 184 aa19.81■□□□□ 0.76
PACS1-201ENST00000320580 HSP90B2PQ58FF3 399 aa19.81■□□□□ 0.76
PACS1-201ENST00000320580 SF3A1Q15459 793 aaKnown RBP19.8■□□□□ 0.76
PACS1-201ENST00000320580 CCDC186Q7Z3E2 898 aa19.8■□□□□ 0.76
PACS1-201ENST00000320580 GTF2A1P52655 376 aaPredicted RBP19.8■□□□□ 0.76
PACS1-201ENST00000320580 BMS1Q14692 1282 aaKnown RBP19.8■□□□□ 0.76
PACS1-201ENST00000320580 GPRASP1Q5JY77 1395 aa19.79■□□□□ 0.76
PACS1-201ENST00000320580 DIAPH1O60610 1272 aaKnown RBP19.79■□□□□ 0.76
PACS1-201ENST00000320580 CERS3Q8IU89 383 aa19.79■□□□□ 0.76
PACS1-201ENST00000320580 PAXBP1Q9Y5B6 917 aa19.79■□□□□ 0.76
PACS1-201ENST00000320580 ABCC2Q92887 1545 aa19.79■□□□□ 0.76
PACS1-201ENST00000320580 MAP3K11Q16584 847 aa19.79■□□□□ 0.76
PACS1-201ENST00000320580 CEP135Q66GS9 1140 aa19.79■□□□□ 0.76
PACS1-201ENST00000320580 BLMP54132 1417 aaPredicted RBP19.79■□□□□ 0.76
PACS1-201ENST00000320580 ATP2B3Q16720 1220 aa19.78■□□□□ 0.76
PACS1-201ENST00000320580 RALGAPBQ86X10 1494 aa19.78■□□□□ 0.76
PACS1-201ENST00000320580 USP48Q86UV5 1035 aa19.78■□□□□ 0.76
PACS1-201ENST00000320580 HDGFL2Q7Z4V5 671 aaPredicted RBP19.78■□□□□ 0.76
PACS1-201ENST00000320580 TEX14Q8IWB6 1497 aa19.78■□□□□ 0.76
PACS1-201ENST00000320580 TMX3Q96JJ7 454 aa19.77■□□□□ 0.76
PACS1-201ENST00000320580 SLC12A5Q9H2X9 1139 aa19.77■□□□□ 0.76
PACS1-201ENST00000320580 FANCAO15360 1455 aa19.77■□□□□ 0.76
PACS1-201ENST00000320580 ADGRL1O94910 1474 aa19.77■□□□□ 0.76
PACS1-201ENST00000320580 ZSCAN20P17040 1043 aaPredicted RBP19.77■□□□□ 0.76
PACS1-201ENST00000320580 CLIP2Q9UDT6 1046 aa19.77■□□□□ 0.76
PACS1-201ENST00000320580 FMNL2Q96PY5 1086 aa19.76■□□□□ 0.75
PACS1-201ENST00000320580 RNF20Q5VTR2 975 aa19.76■□□□□ 0.75
PACS1-201ENST00000320580 CKAP2LQ8IYA6 745 aa19.76■□□□□ 0.75
PACS1-201ENST00000320580 CHAMP1Q96JM3 812 aa19.76■□□□□ 0.75
PACS1-201ENST00000320580 STK31Q9BXU1 1019 aa19.76■□□□□ 0.75
PACS1-201ENST00000320580 ZBTB22O15209 634 aa19.76■□□□□ 0.75
PACS1-201ENST00000320580 PTGS1P23219 599 aa19.76■□□□□ 0.75
PACS1-201ENST00000320580 FAM177A1Q8N128 213 aaPredicted RBP19.76■□□□□ 0.75
PACS1-201ENST00000320580 SMARCA5O60264 1052 aaPredicted RBP19.76■□□□□ 0.75
PACS1-201ENST00000320580 SMC2O95347 1197 aa19.75■□□□□ 0.75
PACS1-201ENST00000320580 LMOD3Q0VAK6 560 aa19.75■□□□□ 0.75
PACS1-201ENST00000320580 PKP1Q13835 747 aa19.75■□□□□ 0.75
PACS1-201ENST00000320580 ZNF397Q8NF99 534 aaPredicted RBP19.75■□□□□ 0.75
PACS1-201ENST00000320580 ZKSCAN1P17029 563 aaPredicted RBP19.75■□□□□ 0.75
PACS1-201ENST00000320580 CCDC73Q6ZRK6 1079 aa19.75■□□□□ 0.75
PACS1-201ENST00000320580 C10orf67Q8IYJ2 551 aa19.75■□□□□ 0.75
PACS1-201ENST00000320580 GGNBP2Q9H3C7 697 aa19.75■□□□□ 0.75
PACS1-201ENST00000320580 SMTNL1A8MU46 457 aa19.74■□□□□ 0.75
PACS1-201ENST00000320580 KRT85P78386 507 aa19.74■□□□□ 0.75
PACS1-201ENST00000320580 KDM4AO75164 1064 aa19.74■□□□□ 0.75
PACS1-201ENST00000320580 GNAI1P63096 354 aa19.74■□□□□ 0.75
PACS1-201ENST00000320580 PLCH2O75038 1416 aa19.74■□□□□ 0.75
PACS1-201ENST00000320580 CD2BP2O95400 341 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms