RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 SALL2Q9Y467 1007 aaPredicted RBP41.4■■■■■ 4.22
NECTIN3-201ENST00000319792 ZNF521Q96K83 1311 aa41.4■■■■■ 4.22
NECTIN3-201ENST00000319792 GCP02774 474 aa41.39■■■■■ 4.22
NECTIN3-201ENST00000319792 NCBP3Q53F19 620 aaKnown RBP41.39■■■■■ 4.22
NECTIN3-201ENST00000319792 ROBO1Q9Y6N7 1651 aa41.38■■■■■ 4.21
NECTIN3-201ENST00000319792 HOXC9P31274 260 aa41.38■■■■■ 4.21
NECTIN3-201ENST00000319792 RSPH6AQ9H0K4 717 aa41.37■■■■■ 4.21
NECTIN3-201ENST00000319792 TCP11L2Q8N4U5 519 aa41.36■■■■■ 4.21
NECTIN3-201ENST00000319792 ARHGEF25Q86VW2 580 aa41.32■■■■■ 4.2
NECTIN3-201ENST00000319792 IP6K1Q92551 441 aa41.32■■■■■ 4.2
NECTIN3-201ENST00000319792 AHDC1Q5TGY3 1603 aaPredicted RBP41.31■■■■■ 4.2
NECTIN3-201ENST00000319792 MAPK8IP3Q9UPT6 1336 aa41.29■■■■■ 4.2
NECTIN3-201ENST00000319792 PHF23Q9BUL5 403 aaPredicted RBP41.28■■■■■ 4.2
NECTIN3-201ENST00000319792 PRKAR2BP31323 418 aa41.27■■■■■ 4.2
NECTIN3-201ENST00000319792 HMOX1P09601 288 aa41.26■■■■■ 4.2
NECTIN3-201ENST00000319792 CCDC27Q2M243 656 aa41.26■■■■■ 4.2
NECTIN3-201ENST00000319792 ABCA3Q99758 1704 aa41.26■■■■■ 4.19
NECTIN3-201ENST00000319792 ABCC6O95255 1503 aa41.25■■■■■ 4.19
NECTIN3-201ENST00000319792 IGSF1Q8N6C5 1336 aa41.23■■■■■ 4.19
NECTIN3-201ENST00000319792 COL18A1P39060 1754 aa41.22■■■■■ 4.19
NECTIN3-201ENST00000319792 KDRP35968 1356 aa41.21■■■■■ 4.19
NECTIN3-201ENST00000319792 TMPOP42166 694 aaKnown RBP41.2■■■■■ 4.19
NECTIN3-201ENST00000319792 WWC1Q8IX03 1113 aa41.2■■■■■ 4.19
NECTIN3-201ENST00000319792 RRP7AQ9Y3A4 280 aaKnown RBP41.2■■■■■ 4.19
NECTIN3-201ENST00000319792 GOLGA2Q08379 1002 aa41.19■■■■■ 4.18
NECTIN3-201ENST00000319792 CDCA7LQ96GN5 454 aa41.19■■■■■ 4.18
NECTIN3-201ENST00000319792 NEFMP07197 916 aa41.18■■■■■ 4.18
NECTIN3-201ENST00000319792 SULT6B1Q6IMI4 303 aa41.18■■■■■ 4.18
NECTIN3-201ENST00000319792 RGPD5Q99666 1765 aa41.18■■■■■ 4.18
NECTIN3-201ENST00000319792 AEBP1Q8IUX7 1158 aa41.17■■■■■ 4.18
NECTIN3-201ENST00000319792 EYA1Q99502 592 aa41.17■■■■■ 4.18
NECTIN3-201ENST00000319792 CPDO75976 1380 aa41.17■■■■■ 4.18
NECTIN3-201ENST00000319792 PLEKHG5O94827 1062 aa41.15■■■■■ 4.18
NECTIN3-201ENST00000319792 NEUROD2Q15784 382 aa41.14■■■■■ 4.18
NECTIN3-201ENST00000319792 PHACTR3Q96KR7 559 aa41.14■■■■■ 4.18
NECTIN3-201ENST00000319792 DLG5Q8TDM6 1919 aa41.14■■■■■ 4.18
NECTIN3-201ENST00000319792 CABLES1Q8TDN4 633 aa41.13■■■■■ 4.18
NECTIN3-201ENST00000319792 CAMTA1Q9Y6Y1 1673 aa41.13■■■■■ 4.17
NECTIN3-201ENST00000319792 RGPD2P0DJD1 1756 aa41.12■■■■■ 4.17
NECTIN3-201ENST00000319792 ZBTB7CA1YPR0 619 aa41.11■■■■■ 4.17
NECTIN3-201ENST00000319792 TOM1O60784 492 aa41.11■■■■■ 4.17
NECTIN3-201ENST00000319792 ZC3H6P61129 1189 aaKnown RBP41.11■■■■■ 4.17
NECTIN3-201ENST00000319792 SLFN5Q08AF3 891 aa41.11■■■■■ 4.17
NECTIN3-201ENST00000319792 NFE2L2Q16236 605 aa41.11■■■■■ 4.17
NECTIN3-201ENST00000319792 WDR63Q8IWG1 891 aa41.11■■■■■ 4.17
NECTIN3-201ENST00000319792 TRMT2AQ8IZ69 625 aaKnown RBP41.1■■■■■ 4.17
NECTIN3-201ENST00000319792 COL22A1Q8NFW1 1626 aaPredicted RBP41.09■■■■■ 4.17
NECTIN3-201ENST00000319792 PHLPP1O60346 1717 aa41.08■■■■■ 4.17
NECTIN3-201ENST00000319792 NCAPD2Q15021 1401 aa41.08■■■■■ 4.17
NECTIN3-201ENST00000319792 LTV1Q96GA3 475 aaPredicted RBP41.08■■■■■ 4.17
NECTIN3-201ENST00000319792 TRIM35Q9UPQ4 493 aa41.08■■■■■ 4.17
NECTIN3-201ENST00000319792 E9PSI1 815 aa41.07■■■■■ 4.16
NECTIN3-201ENST00000319792 RIPK4P57078 832 aa41.07■■■■■ 4.16
NECTIN3-201ENST00000319792 DUSP27Q5VZP5 1158 aa41.06■■■■■ 4.16
NECTIN3-201ENST00000319792 COL16A1Q07092 1604 aaPredicted RBP41.06■■■■■ 4.16
NECTIN3-201ENST00000319792 FAM208AQ9UK61 1670 aaKnown RBP41.05■■■■■ 4.16
NECTIN3-201ENST00000319792 LRRC59Q96AG4 307 aaKnown RBP41.05■■■■■ 4.16
NECTIN3-201ENST00000319792 LMO7Q8WWI1 1683 aa41.05■■■■■ 4.16
NECTIN3-201ENST00000319792 AXIN2Q9Y2T1 843 aa41.04■■■■■ 4.16
NECTIN3-201ENST00000319792 GTF3C3Q9Y5Q9 886 aa41.04■■■■■ 4.16
NECTIN3-201ENST00000319792 KIAA0232Q92628 1395 aa41.03■■■■■ 4.16
NECTIN3-201ENST00000319792 SPINK5Q9NQ38 1064 aaPredicted RBP41.03■■■■■ 4.16
NECTIN3-201ENST00000319792 ANKRD24Q8TF21 1146 aa41.01■■■■■ 4.16
NECTIN3-201ENST00000319792 ERBB3P21860 1342 aa40.99■■■■■ 4.15
NECTIN3-201ENST00000319792 NBPF6Q5VWK0 638 aa40.98■■■■■ 4.15
NECTIN3-201ENST00000319792 NBPF4Q96M43 638 aa40.98■■■■■ 4.15
NECTIN3-201ENST00000319792 SUPT16HQ9Y5B9 1047 aaKnown RBP40.98■■■■■ 4.15
NECTIN3-201ENST00000319792 IL16Q14005 1332 aa40.97■■■■■ 4.15
NECTIN3-201ENST00000319792 LMOD3Q0VAK6 560 aa40.95■■■■■ 4.15
NECTIN3-201ENST00000319792 UBAP1LF5GYI3 381 aa40.92■■■■■ 4.14
NECTIN3-201ENST00000319792 CHRNA2Q15822 529 aa40.91■■■■■ 4.14
NECTIN3-201ENST00000319792 HAP1P54257 671 aaPredicted RBP40.9■■■■■ 4.14
NECTIN3-201ENST00000319792 USHBP1Q8N6Y0 703 aa40.89■■■■■ 4.14
NECTIN3-201ENST00000319792 PRDM11Q9NQV5 511 aa40.89■■■■■ 4.14
NECTIN3-201ENST00000319792 RNF123Q5XPI4 1314 aa40.89■■■■■ 4.14
NECTIN3-201ENST00000319792 CERKQ8TCT0 537 aa40.88■■■■■ 4.14
NECTIN3-201ENST00000319792 PIP4K2BP78356 416 aa40.88■■■■■ 4.13
NECTIN3-201ENST00000319792 RCAN3Q9UKA8 241 aa40.88■■■■■ 4.13
NECTIN3-201ENST00000319792 GAS2L2Q8NHY3 880 aa40.87■■■■■ 4.13
NECTIN3-201ENST00000319792 MYH16Q9H6N6 1097 aa40.87■■■■■ 4.13
NECTIN3-201ENST00000319792 MTHFSDQ2M296 383 aaKnown RBP40.86■■■■■ 4.13
NECTIN3-201ENST00000319792 CALD1Q05682 793 aaKnown RBP40.85■■■■■ 4.13
NECTIN3-201ENST00000319792 COL14A1Q05707 1796 aaKnown RBP40.81■■■■■ 4.12
NECTIN3-201ENST00000319792 COL5A2P05997 1499 aaPredicted RBP40.81■■■■■ 4.12
NECTIN3-201ENST00000319792 NEFLP07196 543 aa40.8■■■■■ 4.12
NECTIN3-201ENST00000319792 PLEKHG2Q9H7P9 1386 aa40.78■■■■■ 4.12
NECTIN3-201ENST00000319792 LRRC37A3O60309 1634 aa40.77■■■■■ 4.12
NECTIN3-201ENST00000319792 FANCIQ9NVI1 1328 aa40.76■■■■■ 4.12
NECTIN3-201ENST00000319792 HTATSF1O43719 755 aaKnown RBP40.75■■■■■ 4.11
NECTIN3-201ENST00000319792 THUMPD2Q9BTF0 503 aaKnown RBP40.75■■■■■ 4.11
NECTIN3-201ENST00000319792 NLRP2Q9NX02 1062 aa40.75■■■■■ 4.11
NECTIN3-201ENST00000319792 FAM83GA6ND36 823 aa40.74■■■■■ 4.11
NECTIN3-201ENST00000319792 CSB-PGBD3P0DP91 1061 aa40.74■■■■■ 4.11
NECTIN3-201ENST00000319792 WDR17Q8IZU2 1322 aa40.74■■■■■ 4.11
NECTIN3-201ENST00000319792 IFT57Q9NWB7 429 aa40.73■■■■■ 4.11
NECTIN3-201ENST00000319792 ZNF853P0CG23 659 aa40.72■■■■■ 4.11
NECTIN3-201ENST00000319792 MAP3K5Q99683 1374 aa40.72■■■■■ 4.11
NECTIN3-201ENST00000319792 GNAI1P63096 354 aa40.7■■■■■ 4.11
NECTIN3-201ENST00000319792 AMOTQ4VCS5 1084 aa40.7■■■■■ 4.11
NECTIN3-201ENST00000319792 DCTN1Q14203 1278 aa40.68■■■■■ 4.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms