RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.99■■□□□ 1.11
FOXR1-201ENST00000317011 TMC1Q8TDI8 760 aa21.99■■□□□ 1.11
FOXR1-201ENST00000317011 CARD10Q9BWT7 1032 aa21.99■■□□□ 1.11
FOXR1-201ENST00000317011 EZH2Q15910 746 aaKnown RBP21.98■■□□□ 1.11
FOXR1-201ENST00000317011 NME9Q86XW9 330 aa21.98■■□□□ 1.11
FOXR1-201ENST00000317011 NFAT5O94916 1531 aa21.97■■□□□ 1.11
FOXR1-201ENST00000317011 CDCA7Q9BWT1 371 aaPredicted RBP21.97■■□□□ 1.11
FOXR1-201ENST00000317011 TERF2IPQ9NYB0 399 aa21.97■■□□□ 1.11
FOXR1-201ENST00000317011 APBA3O96018 575 aa21.96■■□□□ 1.11
FOXR1-201ENST00000317011 PCGF6Q9BYE7 350 aa21.96■■□□□ 1.11
FOXR1-201ENST00000317011 RGPD1P0DJD0 1748 aa21.96■■□□□ 1.11
FOXR1-201ENST00000317011 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
FOXR1-201ENST00000317011 EDC4Q6P2E9 1401 aaKnown RBP21.95■■□□□ 1.1
FOXR1-201ENST00000317011 SOX12O15370 315 aa21.94■■□□□ 1.1
FOXR1-201ENST00000317011 DDB1Q16531 1140 aa21.94■■□□□ 1.1
FOXR1-201ENST00000317011 A0A1W2PP64 1363 aa21.94■■□□□ 1.1
FOXR1-201ENST00000317011 PARD3Q8TEW0 1356 aa21.94■■□□□ 1.1
FOXR1-201ENST00000317011 MON2Q7Z3U7 1717 aa21.94■■□□□ 1.1
FOXR1-201ENST00000317011 NINLQ9Y2I6 1382 aa21.93■■□□□ 1.1
FOXR1-201ENST00000317011 PARP4Q9UKK3 1724 aaKnown RBP21.92■■□□□ 1.1
FOXR1-201ENST00000317011 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
FOXR1-201ENST00000317011 ABCC6O95255 1503 aa21.91■■□□□ 1.1
FOXR1-201ENST00000317011 BCL9O00512 1426 aa21.91■■□□□ 1.1
FOXR1-201ENST00000317011 PSDA5PKW4 1024 aaPredicted RBP21.91■■□□□ 1.1
FOXR1-201ENST00000317011 MARCH10Q8NA82 808 aaPredicted RBP21.91■■□□□ 1.1
FOXR1-201ENST00000317011 USP54Q70EL1 1684 aa21.9■■□□□ 1.1
FOXR1-201ENST00000317011 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.1
FOXR1-201ENST00000317011 PLSCR1O15162 318 aa21.89■■□□□ 1.09
FOXR1-201ENST00000317011 CSB-PGBD3P0DP91 1061 aa21.89■■□□□ 1.09
FOXR1-201ENST00000317011 CCDC7Q96M83 1385 aa21.88■■□□□ 1.09
FOXR1-201ENST00000317011 ERBB3P21860 1342 aa21.88■■□□□ 1.09
FOXR1-201ENST00000317011 OVOS2A0A0G2JMS6 1433 aa21.88■■□□□ 1.09
FOXR1-201ENST00000317011 OVOS2A0A0J9YW53 1432 aa21.88■■□□□ 1.09
FOXR1-201ENST00000317011 OVOS2Q6IE36 1432 aa21.88■■□□□ 1.09
FOXR1-201ENST00000317011 EXOC5O00471 708 aa21.87■■□□□ 1.09
FOXR1-201ENST00000317011 R3HDM1Q15032 1099 aaKnown RBP21.87■■□□□ 1.09
FOXR1-201ENST00000317011 BCL11BQ9C0K0 894 aaPredicted RBP21.87■■□□□ 1.09
FOXR1-201ENST00000317011 PEAK1Q9H792 1746 aa21.86■■□□□ 1.09
FOXR1-201ENST00000317011 TMF1P82094 1093 aa21.85■■□□□ 1.09
FOXR1-201ENST00000317011 IP6K1Q92551 441 aa21.85■■□□□ 1.09
FOXR1-201ENST00000317011 USP47Q96K76 1375 aa21.85■■□□□ 1.09
FOXR1-201ENST00000317011 PTF1AQ7RTS3 328 aa21.84■■□□□ 1.09
FOXR1-201ENST00000317011 RGPD5Q99666 1765 aa21.84■■□□□ 1.09
FOXR1-201ENST00000317011 ANKRD24Q8TF21 1146 aa21.83■■□□□ 1.09
FOXR1-201ENST00000317011 ANKRD36BQ8N2N9 1353 aa21.83■■□□□ 1.08
FOXR1-201ENST00000317011 LRRC37A3O60309 1634 aa21.82■■□□□ 1.08
FOXR1-201ENST00000317011 FYB1O15117 783 aa21.81■■□□□ 1.08
FOXR1-201ENST00000317011 PROM2Q8N271 834 aa21.81■■□□□ 1.08
FOXR1-201ENST00000317011 COG3Q96JB2 828 aa21.81■■□□□ 1.08
FOXR1-201ENST00000317011 NLRP2Q9NX02 1062 aa21.81■■□□□ 1.08
FOXR1-201ENST00000317011 NBPF14Q5TI25 921 aa21.8■■□□□ 1.08
FOXR1-201ENST00000317011 IL2RBP14784 551 aa21.79■■□□□ 1.08
FOXR1-201ENST00000317011 CDCA8Q53HL2 280 aa21.79■■□□□ 1.08
FOXR1-201ENST00000317011 LRP5O75197 1615 aa21.79■■□□□ 1.08
FOXR1-201ENST00000317011 FBLN1P23142 703 aa21.78■■□□□ 1.08
FOXR1-201ENST00000317011 MAP3K19Q56UN5 1328 aa21.78■■□□□ 1.08
FOXR1-201ENST00000317011 RREB1Q92766 1687 aa21.76■■□□□ 1.07
FOXR1-201ENST00000317011 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
FOXR1-201ENST00000317011 TNS2Q63HR2 1409 aa21.75■■□□□ 1.07
FOXR1-201ENST00000317011 HOXC9P31274 260 aa21.75■■□□□ 1.07
FOXR1-201ENST00000317011 WNK3Q9BYP7 1800 aa21.75■■□□□ 1.07
FOXR1-201ENST00000317011 KCNQ2O43526 872 aa21.74■■□□□ 1.07
FOXR1-201ENST00000317011 CARD14Q9BXL6 1004 aa21.74■■□□□ 1.07
FOXR1-201ENST00000317011 GGNBP2Q9H3C7 697 aa21.72■■□□□ 1.07
FOXR1-201ENST00000317011 LTN1O94822 1766 aa21.71■■□□□ 1.07
FOXR1-201ENST00000317011 AMPHP49418 695 aa21.71■■□□□ 1.07
FOXR1-201ENST00000317011 NUP188Q5SRE5 1749 aa21.71■■□□□ 1.07
FOXR1-201ENST00000317011 TXNRD1Q16881 649 aa21.7■■□□□ 1.06
FOXR1-201ENST00000317011 LTV1Q96GA3 475 aaPredicted RBP21.69■■□□□ 1.06
FOXR1-201ENST00000317011 ANO8Q9HCE9 1232 aaPredicted RBP21.69■■□□□ 1.06
FOXR1-201ENST00000317011 RGPD3A6NKT7 1758 aaPredicted RBP21.69■■□□□ 1.06
FOXR1-201ENST00000317011 RGPD4Q7Z3J3 1758 aa21.69■■□□□ 1.06
FOXR1-201ENST00000317011 RRS1Q15050 365 aaKnown RBP21.68■■□□□ 1.06
FOXR1-201ENST00000317011 RTL1A6NKG5 1358 aa21.67■■□□□ 1.06
FOXR1-201ENST00000317011 NBPF6Q5VWK0 638 aa21.66■■□□□ 1.06
FOXR1-201ENST00000317011 ACSBG1Q96GR2 724 aa21.66■■□□□ 1.06
FOXR1-201ENST00000317011 NBPF4Q96M43 638 aa21.66■■□□□ 1.06
FOXR1-201ENST00000317011 KIF24Q5T7B8 1368 aa21.64■■□□□ 1.06
FOXR1-201ENST00000317011 HSP90AB2PQ58FF8 381 aa21.63■■□□□ 1.05
FOXR1-201ENST00000317011 SPON1Q9HCB6 807 aa21.63■■□□□ 1.05
FOXR1-201ENST00000317011 INSRP06213 1382 aa21.62■■□□□ 1.05
FOXR1-201ENST00000317011 SLC15A2Q16348 729 aa21.62■■□□□ 1.05
FOXR1-201ENST00000317011 ZCRB1Q8TBF4 217 aaKnown RBP21.62■■□□□ 1.05
FOXR1-201ENST00000317011 DDX54Q8TDD1 881 aaKnown RBP21.62■■□□□ 1.05
FOXR1-201ENST00000317011 PDGFDQ9GZP0 370 aaPredicted RBP21.61■■□□□ 1.05
FOXR1-201ENST00000317011 CGNL1Q0VF96 1302 aa21.6■■□□□ 1.05
FOXR1-201ENST00000317011 EIF4G2P78344 907 aaKnown RBP eCLIP21.59■■□□□ 1.05
FOXR1-201ENST00000317011 NSD3Q9BZ95 1437 aa21.58■■□□□ 1.05
FOXR1-201ENST00000317011 STK32BQ9NY57 414 aa21.58■■□□□ 1.05
FOXR1-201ENST00000317011 NHSQ6T4R5 1651 aa21.58■■□□□ 1.05
FOXR1-201ENST00000317011 FAM208AQ9UK61 1670 aaKnown RBP21.58■■□□□ 1.05
FOXR1-201ENST00000317011 HSPA5P11021 654 aaKnown RBP21.57■■□□□ 1.04
FOXR1-201ENST00000317011 CCER1Q8TC90 406 aaPredicted RBP21.57■■□□□ 1.04
FOXR1-201ENST00000317011 LRRC4BQ9NT99 713 aa21.57■■□□□ 1.04
FOXR1-201ENST00000317011 FLT4P35916 1363 aa21.57■■□□□ 1.04
FOXR1-201ENST00000317011 MEGF6O75095 1541 aa21.56■■□□□ 1.04
FOXR1-201ENST00000317011 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
FOXR1-201ENST00000317011 EMILIN1Q9Y6C2 1016 aa21.56■■□□□ 1.04
FOXR1-201ENST00000317011 MYOM1P52179 1685 aa21.55■■□□□ 1.04
FOXR1-201ENST00000317011 WASHC2AQ641Q2 1341 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms