RNA–Protein interactions for RNA: ENST00000316461.8

TTC9C-202, Transcript of tetratricopeptide repeat domain 9C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-202ENST00000316461 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
TTC9C-202ENST00000316461 ITSN1Q15811 1721 aa10.95□□□□□ -0.66
TTC9C-202ENST00000316461 ARHGEF28Q8N1W1 1705 aaKnown RBP10.95□□□□□ -0.66
TTC9C-202ENST00000316461 EXOC5O00471 708 aa10.94□□□□□ -0.66
TTC9C-202ENST00000316461 HDGFL2Q7Z4V5 671 aaPredicted RBP10.94□□□□□ -0.66
TTC9C-202ENST00000316461 PROM2Q8N271 834 aa10.94□□□□□ -0.66
TTC9C-202ENST00000316461 CASZ1Q86V15 1759 aa10.94□□□□□ -0.66
TTC9C-202ENST00000316461 CRYBG1Q9Y4K1 1723 aa10.94□□□□□ -0.66
TTC9C-202ENST00000316461 KTN1Q86UP2 1357 aaKnown RBP10.93□□□□□ -0.66
TTC9C-202ENST00000316461 USP19O94966 1318 aa10.93□□□□□ -0.66
TTC9C-202ENST00000316461 TTC21BQ7Z4L5 1316 aa10.93□□□□□ -0.66
TTC9C-202ENST00000316461 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
TTC9C-202ENST00000316461 NLRP2Q9NX02 1062 aa10.93□□□□□ -0.66
TTC9C-202ENST00000316461 CPDO75976 1380 aa10.92□□□□□ -0.66
TTC9C-202ENST00000316461 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
TTC9C-202ENST00000316461 USP6P35125 1406 aa10.92□□□□□ -0.66
TTC9C-202ENST00000316461 CRB1P82279 1406 aa10.92□□□□□ -0.66
TTC9C-202ENST00000316461 TONSLQ96HA7 1378 aa10.91□□□□□ -0.66
TTC9C-202ENST00000316461 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
TTC9C-202ENST00000316461 LTV1Q96GA3 475 aaPredicted RBP10.91□□□□□ -0.66
TTC9C-202ENST00000316461 BRD4O60885 1362 aaPredicted RBP10.9□□□□□ -0.66
TTC9C-202ENST00000316461 CLSPNQ9HAW4 1339 aa10.9□□□□□ -0.66
TTC9C-202ENST00000316461 ACSBG1Q96GR2 724 aa10.9□□□□□ -0.66
TTC9C-202ENST00000316461 PHRF1Q9P1Y6 1649 aaKnown RBP10.9□□□□□ -0.66
TTC9C-202ENST00000316461 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.67
TTC9C-202ENST00000316461 WDR17Q8IZU2 1322 aa10.89□□□□□ -0.67
TTC9C-202ENST00000316461 TTC21AQ8NDW8 1320 aa10.89□□□□□ -0.67
TTC9C-202ENST00000316461 ARHGEF25Q86VW2 580 aa10.89□□□□□ -0.67
TTC9C-202ENST00000316461 CDCA7Q9BWT1 371 aaPredicted RBP10.89□□□□□ -0.67
TTC9C-202ENST00000316461 COL5A2P05997 1499 aaPredicted RBP10.88□□□□□ -0.67
TTC9C-202ENST00000316461 OVOS2A0A0G2JMS6 1433 aa10.88□□□□□ -0.67
TTC9C-202ENST00000316461 OVOS2A0A0J9YW53 1432 aa10.88□□□□□ -0.67
TTC9C-202ENST00000316461 OVOS2Q6IE36 1432 aa10.88□□□□□ -0.67
TTC9C-202ENST00000316461 NME9Q86XW9 330 aa10.88□□□□□ -0.67
TTC9C-202ENST00000316461 MARCH10Q8NA82 808 aaPredicted RBP10.88□□□□□ -0.67
TTC9C-202ENST00000316461 SGIP1Q9BQI5 828 aa10.88□□□□□ -0.67
TTC9C-202ENST00000316461 SLC12A5Q9H2X9 1139 aa10.88□□□□□ -0.67
TTC9C-202ENST00000316461 STK32BQ9NY57 414 aa10.88□□□□□ -0.67
TTC9C-202ENST00000316461 TERF2IPQ9NYB0 399 aa10.88□□□□□ -0.67
TTC9C-202ENST00000316461 KIAA1210Q9ULL0 1709 aa10.87□□□□□ -0.67
TTC9C-202ENST00000316461 PLSCR1O15162 318 aa10.87□□□□□ -0.67
TTC9C-202ENST00000316461 GPR162Q16538 588 aa10.87□□□□□ -0.67
TTC9C-202ENST00000316461 PELP1Q8IZL8 1130 aaKnown RBP10.87□□□□□ -0.67
TTC9C-202ENST00000316461 CARD10Q9BWT7 1032 aa10.87□□□□□ -0.67
TTC9C-202ENST00000316461 QRICH2Q9H0J4 1663 aa10.87□□□□□ -0.67
TTC9C-202ENST00000316461 CHD4Q14839 1912 aa10.87□□□□□ -0.67
TTC9C-202ENST00000316461 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
TTC9C-202ENST00000316461 ANKRD24Q8TF21 1146 aa10.86□□□□□ -0.67
TTC9C-202ENST00000316461 PEAK1Q9H792 1746 aa10.86□□□□□ -0.67
TTC9C-202ENST00000316461 AMPHP49418 695 aa10.85□□□□□ -0.67
TTC9C-202ENST00000316461 SLC15A2Q16348 729 aa10.85□□□□□ -0.67
TTC9C-202ENST00000316461 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
TTC9C-202ENST00000316461 SYTL4Q96C24 671 aaPredicted RBP10.85□□□□□ -0.67
TTC9C-202ENST00000316461 ARXQ96QS3 562 aa10.85□□□□□ -0.67
TTC9C-202ENST00000316461 TIMELESSQ9UNS1 1208 aa10.85□□□□□ -0.67
TTC9C-202ENST00000316461 TOPAZ1Q8N9V7 1692 aa10.85□□□□□ -0.67
TTC9C-202ENST00000316461 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
TTC9C-202ENST00000316461 IL2RBP14784 551 aa10.84□□□□□ -0.67
TTC9C-202ENST00000316461 TXNRD1Q16881 649 aa10.84□□□□□ -0.67
TTC9C-202ENST00000316461 COG3Q96JB2 828 aa10.84□□□□□ -0.67
TTC9C-202ENST00000316461 CCDC7Q96M83 1385 aa10.83□□□□□ -0.68
TTC9C-202ENST00000316461 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.68
TTC9C-202ENST00000316461 MTFR1LQ9H019 292 aa10.83□□□□□ -0.68
TTC9C-202ENST00000316461 SBF2Q86WG5 1849 aa10.83□□□□□ -0.68
TTC9C-202ENST00000316461 SHANK3Q9BYB0 1731 aa10.83□□□□□ -0.68
TTC9C-202ENST00000316461 LMO7Q8WWI1 1683 aa10.82□□□□□ -0.68
TTC9C-202ENST00000316461 PARP4Q9UKK3 1724 aaKnown RBP10.82□□□□□ -0.68
TTC9C-202ENST00000316461 ST20-MTHFSA0A0A6YYL1 179 aa10.82□□□□□ -0.68
TTC9C-202ENST00000316461 MSH5O43196 834 aa10.82□□□□□ -0.68
TTC9C-202ENST00000316461 TRPM1Q7Z4N2 1603 aa10.82□□□□□ -0.68
TTC9C-202ENST00000316461 NLGN2Q8NFZ4 835 aa10.81□□□□□ -0.68
TTC9C-202ENST00000316461 GOLGB1Q14789 3259 aaKnown RBP10.81□□□□□ -0.68
TTC9C-202ENST00000316461 LRRC37A3O60309 1634 aa10.8□□□□□ -0.68
TTC9C-202ENST00000316461 RGPD3A6NKT7 1758 aaPredicted RBP10.8□□□□□ -0.68
TTC9C-202ENST00000316461 RGPD4Q7Z3J3 1758 aa10.8□□□□□ -0.68
TTC9C-202ENST00000316461 SLIT3O75094 1523 aa10.8□□□□□ -0.68
TTC9C-202ENST00000316461 SLC24A1O60721 1099 aa10.79□□□□□ -0.68
TTC9C-202ENST00000316461 FBLN1P23142 703 aa10.79□□□□□ -0.68
TTC9C-202ENST00000316461 ZNF827Q17R98 1081 aa10.79□□□□□ -0.68
TTC9C-202ENST00000316461 ERBB3P21860 1342 aa10.79□□□□□ -0.68
TTC9C-202ENST00000316461 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.686e-10■■■□□ 15
TTC9C-202ENST00000316461 TMF1P82094 1093 aa10.78□□□□□ -0.68
TTC9C-202ENST00000316461 ZNF526Q8TF50 670 aaPredicted RBP10.78□□□□□ -0.68
TTC9C-202ENST00000316461 IP6K1Q92551 441 aa10.78□□□□□ -0.68
TTC9C-202ENST00000316461 PIK3C2AO00443 1686 aa10.78□□□□□ -0.68
TTC9C-202ENST00000316461 PPM1GO15355 546 aaPredicted RBP10.77□□□□□ -0.69
TTC9C-202ENST00000316461 GGNBP2Q9H3C7 697 aa10.77□□□□□ -0.69
TTC9C-202ENST00000316461 A0A1W2PP64 1363 aa10.77□□□□□ -0.69
TTC9C-202ENST00000316461 EDC4Q6P2E9 1401 aaKnown RBP10.76□□□□□ -0.69
TTC9C-202ENST00000316461 CAPN15O75808 1086 aa10.76□□□□□ -0.69
TTC9C-202ENST00000316461 RRS1Q15050 365 aaKnown RBP10.76□□□□□ -0.69
TTC9C-202ENST00000316461 USHBP1Q8N6Y0 703 aa10.76□□□□□ -0.69
TTC9C-202ENST00000316461 ZCRB1Q8TBF4 217 aaKnown RBP10.76□□□□□ -0.69
TTC9C-202ENST00000316461 TESK2Q96S53 571 aa10.76□□□□□ -0.69
TTC9C-202ENST00000316461 TFCP2L1Q9NZI6 479 aa10.76□□□□□ -0.69
TTC9C-202ENST00000316461 USP31Q70CQ4 1352 aa10.76□□□□□ -0.69
TTC9C-202ENST00000316461 MAP3K5Q99683 1374 aa10.76□□□□□ -0.69
TTC9C-202ENST00000316461 SBNO2Q9Y2G9 1366 aa10.76□□□□□ -0.69
TTC9C-202ENST00000316461 ATP10DQ9P241 1426 aa10.75□□□□□ -0.69
TTC9C-202ENST00000316461 HSPA6P17066 643 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms