RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 JAKMIP3Q5VZ66 844 aa10.28□□□□□ -0.76
USF3-201ENST00000316407 DYNC1I1O14576 645 aa10.28□□□□□ -0.76
USF3-201ENST00000316407 XBP1P17861 261 aa10.28□□□□□ -0.76
USF3-201ENST00000316407 LARP1BQ659C4 914 aaKnown RBP10.28□□□□□ -0.76
USF3-201ENST00000316407 CEP57L1Q8IYX8 460 aa10.28□□□□□ -0.76
USF3-201ENST00000316407 WDR33Q9C0J8 1336 aaKnown RBP10.28□□□□□ -0.76
USF3-201ENST00000316407 SFPQP23246 707 aaKnown RBP eCLIP10.28□□□□□ -0.76
USF3-201ENST00000316407 PAF1Q8N7H5 531 aa10.28□□□□□ -0.76
USF3-201ENST00000316407 FAM177BA6PVY3 158 aa10.28□□□□□ -0.76
USF3-201ENST00000316407 CCDC148Q8NFR7 591 aa10.28□□□□□ -0.76
USF3-201ENST00000316407 AIMP1Q12904 312 aaKnown RBP10.28□□□□□ -0.76
USF3-201ENST00000316407 TXLNAP40222 546 aa10.28□□□□□ -0.76
USF3-201ENST00000316407 BCAR3O75815 825 aa10.27□□□□□ -0.76
USF3-201ENST00000316407 URI1O94763 535 aaPredicted RBP10.27□□□□□ -0.76
USF3-201ENST00000316407 IFFO1Q0D2I5 559 aa10.27□□□□□ -0.76
USF3-201ENST00000316407 MAP9Q49MG5 647 aa10.27□□□□□ -0.76
USF3-201ENST00000316407 USP25Q9UHP3 1055 aa10.27□□□□□ -0.76
USF3-201ENST00000316407 RSPH14Q9UHP6 348 aa10.27□□□□□ -0.76
USF3-201ENST00000316407 CYP46A1Q9Y6A2 500 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 MAP3K11Q16584 847 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 TTC5Q8N0Z6 440 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 ZHX3Q9H4I2 956 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 TEFQ10587 303 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 CEP57Q86XR8 500 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 LUC7LQ9NQ29 371 aaKnown RBP10.27□□□□□ -0.77
USF3-201ENST00000316407 ANKRD30AQ9BXX3 1397 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 CBFA2T2O43439 604 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 TMEM132AQ24JP5 1023 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 ZSWIM4Q9H7M6 989 aa10.27□□□□□ -0.77
USF3-201ENST00000316407 RUNDC1Q96C34 613 aa10.26□□□□□ -0.77
USF3-201ENST00000316407 CKAP2LQ8IYA6 745 aa10.26□□□□□ -0.77
USF3-201ENST00000316407 CCDC160A6NGH7 325 aa10.26□□□□□ -0.77
USF3-201ENST00000316407 UBTFL1P0CB47 393 aaPredicted RBP10.26□□□□□ -0.77
USF3-201ENST00000316407 CCDC178Q5BJE1 867 aa10.26□□□□□ -0.77
USF3-201ENST00000316407 IKQ13123 557 aaPredicted RBP10.26□□□□□ -0.77
USF3-201ENST00000316407 CWC22Q9HCG8 908 aaKnown RBP10.26□□□□□ -0.77
USF3-201ENST00000316407 ZNF830Q96NB3 372 aaPredicted RBP10.26□□□□□ -0.77
USF3-201ENST00000316407 STIM1Q13586 685 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 COG3Q96JB2 828 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 KIF5CO60282 957 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 SYTL4Q96C24 671 aaPredicted RBP10.25□□□□□ -0.77
USF3-201ENST00000316407 SSR1P43307 286 aaKnown RBP10.25□□□□□ -0.77
USF3-201ENST00000316407 LUZP1Q86V48 1076 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 SCLT1Q96NL6 688 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 RNF216Q9NWF9 866 aaPredicted RBP10.25□□□□□ -0.77
USF3-201ENST00000316407 WIZO95785 1651 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 SMARCC1Q92922 1105 aaPredicted RBP10.25□□□□□ -0.77
USF3-201ENST00000316407 ADCY5O95622 1261 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 TDO2P48775 406 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.25□□□□□ -0.77
USF3-201ENST00000316407 V9GYY5 206 aaPredicted RBP10.25□□□□□ -0.77
USF3-201ENST00000316407 CASTP20810 708 aaKnown RBP10.25□□□□□ -0.77
USF3-201ENST00000316407 FERMT3Q86UX7 667 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 JMYQ8N9B5 988 aa10.25□□□□□ -0.77
USF3-201ENST00000316407 RBM27Q9P2N5 1060 aaKnown RBP10.25□□□□□ -0.77
USF3-201ENST00000316407 KLHL10Q6JEL2 608 aa10.24□□□□□ -0.77
USF3-201ENST00000316407 CCDC7Q96M83 1385 aa10.24□□□□□ -0.77
USF3-201ENST00000316407 API5Q9BZZ5 524 aaKnown RBP10.24□□□□□ -0.77
USF3-201ENST00000316407 CCDC91Q7Z6B0 441 aa10.24□□□□□ -0.77
USF3-201ENST00000316407 TMCO5BA8MYB1 307 aa10.24□□□□□ -0.77
USF3-201ENST00000316407 NOB1Q9ULX3 412 aaKnown RBP10.24□□□□□ -0.77
USF3-201ENST00000316407 DIAPH1O60610 1272 aaKnown RBP10.24□□□□□ -0.77
USF3-201ENST00000316407 MICALCLQ6ZW33 695 aa10.24□□□□□ -0.77
USF3-201ENST00000316407 SIL1Q9H173 461 aa10.24□□□□□ -0.77
USF3-201ENST00000316407 HNRNPMP52272 730 aaKnown RBP eCLIP10.24□□□□□ -0.77
USF3-201ENST00000316407 C10orf67Q8IYJ2 551 aa10.24□□□□□ -0.77
USF3-201ENST00000316407 MINK1Q8N4C8 1332 aaPredicted RBP10.24□□□□□ -0.77
USF3-201ENST00000316407 PIP4K2AP48426 406 aaPredicted RBP10.23□□□□□ -0.77
USF3-201ENST00000316407 ADAMTS8Q9UP79 889 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 CARMIL1Q5VZK9 1371 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 MCM2P49736 904 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 EIF5P55010 431 aaKnown RBP10.23□□□□□ -0.77
USF3-201ENST00000316407 TXLNBQ8N3L3 684 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 HDGFP51858 240 aaKnown RBP10.23□□□□□ -0.77
USF3-201ENST00000316407 MAATS1Q7Z4T9 603 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 TSPYL4Q9UJ04 414 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 CCDC175P0C221 793 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 MATR3P43243 847 aaKnown RBP eCLIP10.23□□□□□ -0.77
USF3-201ENST00000316407 KRT222Q8N1A0 295 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 TSR2Q969E8 191 aaKnown RBP10.23□□□□□ -0.77
USF3-201ENST00000316407 PIBF1Q8WXW3 757 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 FHOD3Q2V2M9 1422 aa10.23□□□□□ -0.77
USF3-201ENST00000316407 TTC31Q49AM3 519 aaPredicted RBP10.23□□□□□ -0.77
USF3-201ENST00000316407 BAZ1AQ9NRL2 1556 aaPredicted RBP10.23□□□□□ -0.77
USF3-201ENST00000316407 PANK2Q9BZ23 570 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 ZSCAN12O43309 604 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 SART3Q15020 963 aaKnown RBP10.22□□□□□ -0.77
USF3-201ENST00000316407 SPATA24Q86W54 205 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 WASHC2AQ641Q2 1341 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 ARID4AP29374 1257 aaPredicted RBP10.22□□□□□ -0.77
USF3-201ENST00000316407 TAF4BQ92750 862 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 CEP135Q66GS9 1140 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 HLTFQ14527 1009 aaKnown RBP eCLIP10.22□□□□□ -0.77
USF3-201ENST00000316407 CCDC183Q5T5S1 534 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 NAA25Q14CX7 972 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 CWC27Q6UX04 472 aaKnown RBP10.22□□□□□ -0.77
USF3-201ENST00000316407 HYPKQ9NX55 129 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 MACROD2A1Z1Q3 448 aa10.22□□□□□ -0.77
USF3-201ENST00000316407 MICALL1Q8N3F8 863 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms