RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 ZBTB7CA1YPR0 619 aa11.15□□□□□ -0.62
BDNF-201ENST00000314915 SMTNL1A8MU46 457 aa11.15□□□□□ -0.62
BDNF-201ENST00000314915 MSL3Q8N5Y2 521 aaKnown RBP11.15□□□□□ -0.62
BDNF-201ENST00000314915 KLHL23Q8NBE8 558 aa11.15□□□□□ -0.62
BDNF-201ENST00000314915 PAX7P23759 505 aa11.15□□□□□ -0.63
BDNF-201ENST00000314915 POLD1P28340 1107 aa11.15□□□□□ -0.63
BDNF-201ENST00000314915 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.63
BDNF-201ENST00000314915 PIK3R5Q8WYR1 880 aa11.15□□□□□ -0.63
BDNF-201ENST00000314915 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
BDNF-201ENST00000314915 GOLGA5Q8TBA6 731 aa11.14□□□□□ -0.63
BDNF-201ENST00000314915 ETAA1Q9NY74 926 aa11.14□□□□□ -0.63
BDNF-201ENST00000314915 LRPPRCP42704 1394 aaKnown RBP11.14□□□□□ -0.63
BDNF-201ENST00000314915 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
BDNF-201ENST00000314915 CAVIN1Q6NZI2 390 aaKnown RBP11.14□□□□□ -0.63
BDNF-201ENST00000314915 SLFNL1Q499Z3 407 aa11.14□□□□□ -0.63
BDNF-201ENST00000314915 C1QTNF12Q5T7M4 302 aa11.14□□□□□ -0.63
BDNF-201ENST00000314915 RNF20Q5VTR2 975 aa11.14□□□□□ -0.63
BDNF-201ENST00000314915 LRRFIP2Q9Y608 721 aaKnown RBP11.14□□□□□ -0.63
BDNF-201ENST00000314915 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 SMC2O95347 1197 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 SNX21Q969T3 373 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 FBXO18Q8NFZ0 1043 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 SMC3Q9UQE7 1217 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 IVLP07476 585 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 TRAF1Q13077 416 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 ABCA5Q8WWZ7 1642 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 IRAK4Q9NWZ3 460 aa11.13□□□□□ -0.63
BDNF-201ENST00000314915 CCT2P78371 535 aaKnown RBP11.12□□□□□ -0.63
BDNF-201ENST00000314915 UVSSAQ2YD98 709 aa11.12□□□□□ -0.63
BDNF-201ENST00000314915 C22orf23Q9BZE7 217 aa11.12□□□□□ -0.63
BDNF-201ENST00000314915 MORC1Q86VD1 984 aa11.12□□□□□ -0.63
BDNF-201ENST00000314915 AK7Q96M32 723 aa11.12□□□□□ -0.63
BDNF-201ENST00000314915 KDM4CQ9H3R0 1056 aa11.12□□□□□ -0.63
BDNF-201ENST00000314915 BAZ1AQ9NRL2 1556 aaPredicted RBP11.12□□□□□ -0.63
BDNF-201ENST00000314915 ADCY2Q08462 1091 aa11.12□□□□□ -0.63
BDNF-201ENST00000314915 ZRSR1Q15695 479 aaKnown RBP11.11□□□□□ -0.63
BDNF-201ENST00000314915 CPSF2Q9P2I0 782 aaKnown RBP11.11□□□□□ -0.63
BDNF-201ENST00000314915 RBM5P52756 815 aaKnown RBP eCLIP11.11□□□□□ -0.63
BDNF-201ENST00000314915 EXOC8Q8IYI6 725 aa11.11□□□□□ -0.63
BDNF-201ENST00000314915 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
BDNF-201ENST00000314915 CAND2O75155 1236 aa11.11□□□□□ -0.63
BDNF-201ENST00000314915 GIMAP7Q8NHV1 300 aa11.11□□□□□ -0.63
BDNF-201ENST00000314915 WWC2Q6AWC2 1192 aa11.11□□□□□ -0.63
BDNF-201ENST00000314915 IQUBQ8NA54 791 aa11.11□□□□□ -0.63
BDNF-201ENST00000314915 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
BDNF-201ENST00000314915 CCDC112Q8NEF3 446 aa11.11□□□□□ -0.63
BDNF-201ENST00000314915 DNAAF4Q8WXU2 420 aa11.1□□□□□ -0.63
BDNF-201ENST00000314915 SH3GL3Q99963 347 aa11.1□□□□□ -0.63
BDNF-201ENST00000314915 EIF3AQ14152 1382 aaKnown RBP11.1□□□□□ -0.63
BDNF-201ENST00000314915 C21orf2O43822 256 aa11.1□□□□□ -0.63
BDNF-201ENST00000314915 LCMT1Q9UIC8 334 aa11.1□□□□□ -0.63
BDNF-201ENST00000314915 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
BDNF-201ENST00000314915 NEK11Q8NG66 645 aa11.1□□□□□ -0.63
BDNF-201ENST00000314915 STAG1Q8WVM7 1258 aa11.1□□□□□ -0.63
BDNF-201ENST00000314915 BAG4O95429 457 aaKnown RBP11.09□□□□□ -0.63
BDNF-201ENST00000314915 ABCD1P33897 745 aa11.09□□□□□ -0.63
BDNF-201ENST00000314915 RWDD2BP57060 319 aa11.09□□□□□ -0.63
BDNF-201ENST00000314915 TMX4Q9H1E5 349 aaPredicted RBP11.09□□□□□ -0.63
BDNF-201ENST00000314915 DNAJC14Q6Y2X3 702 aaPredicted RBP11.09□□□□□ -0.63
BDNF-201ENST00000314915 KIAA1524Q8TCG1 905 aa11.09□□□□□ -0.63
BDNF-201ENST00000314915 BRD4O60885 1362 aaPredicted RBP11.08□□□□□ -0.63
BDNF-201ENST00000314915 CPP00450 1065 aa11.08□□□□□ -0.64
BDNF-201ENST00000314915 SF3A1Q15459 793 aaKnown RBP11.08□□□□□ -0.64
BDNF-201ENST00000314915 NUB1Q9Y5A7 615 aa11.08□□□□□ -0.64
BDNF-201ENST00000314915 NEBLO76041 1014 aa11.08□□□□□ -0.64
BDNF-201ENST00000314915 MYBPC2Q14324 1141 aa11.08□□□□□ -0.64
BDNF-201ENST00000314915 KMT5BQ4FZB7 885 aa11.08□□□□□ -0.64
BDNF-201ENST00000314915 TATDN2Q93075 761 aa11.08□□□□□ -0.64
BDNF-201ENST00000314915 MIEF2Q96C03 454 aa11.08□□□□□ -0.64
BDNF-201ENST00000314915 SCP2P22307 547 aa11.07□□□□□ -0.64
BDNF-201ENST00000314915 CD151P48509 253 aa11.07□□□□□ -0.64
BDNF-201ENST00000314915 KIF2AO00139 706 aaPredicted RBP11.07□□□□□ -0.64
BDNF-201ENST00000314915 KINO60870 393 aaKnown RBP11.07□□□□□ -0.64
BDNF-201ENST00000314915 RBM6P78332 1123 aaKnown RBP11.07□□□□□ -0.64
BDNF-201ENST00000314915 TTC19Q6DKK2 380 aaPredicted RBP11.07□□□□□ -0.64
BDNF-201ENST00000314915 DNAJC5BQ9UF47 199 aa11.07□□□□□ -0.64
BDNF-201ENST00000314915 PLEKHH1Q9ULM0 1364 aa11.07□□□□□ -0.64
BDNF-201ENST00000314915 PPFIA2O75334 1257 aa11.07□□□□□ -0.64
BDNF-201ENST00000314915 MAGEA8P43361 318 aa11.07□□□□□ -0.64
BDNF-201ENST00000314915 INHBEP58166 350 aa11.07□□□□□ -0.64
BDNF-201ENST00000314915 PDCD2Q16342 344 aaPredicted RBP11.07□□□□□ -0.64
BDNF-201ENST00000314915 CCDC186Q7Z3E2 898 aa11.07□□□□□ -0.64
BDNF-201ENST00000314915 NAIF1Q69YI7 327 aaPredicted RBP11.06□□□□□ -0.64
BDNF-201ENST00000314915 TSPY26PQ9H489 355 aa11.06□□□□□ -0.64
BDNF-201ENST00000314915 PSD3Q9NYI0 1048 aa11.06□□□□□ -0.64
BDNF-201ENST00000314915 MNAT1P51948 309 aa11.06□□□□□ -0.64
BDNF-201ENST00000314915 DDX46Q7L014 1031 aaKnown RBP11.06□□□□□ -0.64
BDNF-201ENST00000314915 GPT2Q8TD30 523 aa11.06□□□□□ -0.64
BDNF-201ENST00000314915 TTC12Q9H892 705 aaPredicted RBP11.06□□□□□ -0.64
BDNF-201ENST00000314915 LEKR1Q6ZMV7 388 aa11.05□□□□□ -0.64
BDNF-201ENST00000314915 SPATS2LQ9NUQ6 558 aaKnown RBP11.05□□□□□ -0.64
BDNF-201ENST00000314915 SGSM2O43147 1006 aa11.05□□□□□ -0.64
BDNF-201ENST00000314915 RBBP5Q15291 538 aaKnown RBP11.05□□□□□ -0.64
BDNF-201ENST00000314915 FAXDC2Q96IV6 333 aa11.05□□□□□ -0.64
BDNF-201ENST00000314915 SPAG9O60271 1321 aaKnown RBP11.05□□□□□ -0.64
BDNF-201ENST00000314915 TTLL5Q6EMB2 1281 aa11.05□□□□□ -0.64
BDNF-201ENST00000314915 SYAP1Q96A49 352 aaPredicted RBP11.05□□□□□ -0.64
BDNF-201ENST00000314915 RAD54L2Q9Y4B4 1467 aa11.05□□□□□ -0.64
BDNF-201ENST00000314915 MBD3O95983 291 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms