RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 SOX12O15370 315 aa18.57■□□□□ 0.56
EIF3F-201ENST00000309828 GOLGA2Q08379 1002 aa18.57■□□□□ 0.56
EIF3F-201ENST00000309828 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
EIF3F-201ENST00000309828 RGPD1P0DJD0 1748 aa18.57■□□□□ 0.56
EIF3F-201ENST00000309828 ARHGEF10O15013 1369 aa18.56■□□□□ 0.56
EIF3F-201ENST00000309828 HSP90AB2PQ58FF8 381 aa18.56■□□□□ 0.56
EIF3F-201ENST00000309828 HOXC9P31274 260 aa18.55■□□□□ 0.56
EIF3F-201ENST00000309828 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
EIF3F-201ENST00000309828 GCP02774 474 aa18.54■□□□□ 0.56
EIF3F-201ENST00000309828 IP6K1Q92551 441 aa18.54■□□□□ 0.56
EIF3F-201ENST00000309828 LTN1O94822 1766 aa18.54■□□□□ 0.56
EIF3F-201ENST00000309828 MED1Q15648 1581 aaPredicted RBP18.54■□□□□ 0.56
EIF3F-201ENST00000309828 SOS2Q07890 1332 aaPredicted RBP18.53■□□□□ 0.56
EIF3F-201ENST00000309828 PRKAR2BP31323 418 aa18.53■□□□□ 0.56
EIF3F-201ENST00000309828 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
EIF3F-201ENST00000309828 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
EIF3F-201ENST00000309828 ILDR2Q71H61 639 aa18.53■□□□□ 0.56
EIF3F-201ENST00000309828 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
EIF3F-201ENST00000309828 WWC1Q8IX03 1113 aa18.53■□□□□ 0.56
EIF3F-201ENST00000309828 NHSL1Q5SYE7 1610 aa18.52■□□□□ 0.56
EIF3F-201ENST00000309828 E9PSI1 815 aa18.52■□□□□ 0.56
EIF3F-201ENST00000309828 ARHGEF25Q86VW2 580 aa18.52■□□□□ 0.56
EIF3F-201ENST00000309828 CDCA7LQ96GN5 454 aa18.52■□□□□ 0.56
EIF3F-201ENST00000309828 NEFLP07196 543 aa18.51■□□□□ 0.55
EIF3F-201ENST00000309828 SLFN5Q08AF3 891 aa18.51■□□□□ 0.55
EIF3F-201ENST00000309828 TRMT2AQ8IZ69 625 aaKnown RBP18.51■□□□□ 0.55
EIF3F-201ENST00000309828 IGSF1Q8N6C5 1336 aa18.5■□□□□ 0.55
EIF3F-201ENST00000309828 ABCC6O95255 1503 aa18.5■□□□□ 0.55
EIF3F-201ENST00000309828 SOCS7O14512 581 aa18.5■□□□□ 0.55
EIF3F-201ENST00000309828 HMOX1P09601 288 aa18.5■□□□□ 0.55
EIF3F-201ENST00000309828 DDX17Q92841 729 aaKnown RBP18.5■□□□□ 0.55
EIF3F-201ENST00000309828 KDRP35968 1356 aa18.5■□□□□ 0.55
EIF3F-201ENST00000309828 NFE2L2Q16236 605 aa18.49■□□□□ 0.55
EIF3F-201ENST00000309828 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
EIF3F-201ENST00000309828 SUPT16HQ9Y5B9 1047 aaKnown RBP18.49■□□□□ 0.55
EIF3F-201ENST00000309828 NEUROD2Q15784 382 aa18.48■□□□□ 0.55
EIF3F-201ENST00000309828 DUSP27Q5VZP5 1158 aa18.48■□□□□ 0.55
EIF3F-201ENST00000309828 SULT6B1Q6IMI4 303 aa18.48■□□□□ 0.55
EIF3F-201ENST00000309828 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
EIF3F-201ENST00000309828 RIPK4P57078 832 aa18.47■□□□□ 0.55
EIF3F-201ENST00000309828 IL16Q14005 1332 aa18.47■□□□□ 0.55
EIF3F-201ENST00000309828 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
EIF3F-201ENST00000309828 EYA1Q99502 592 aa18.46■□□□□ 0.55
EIF3F-201ENST00000309828 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.55
EIF3F-201ENST00000309828 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
EIF3F-201ENST00000309828 TRIM35Q9UPQ4 493 aa18.45■□□□□ 0.54
EIF3F-201ENST00000309828 AHDC1Q5TGY3 1603 aaPredicted RBP18.45■□□□□ 0.54
EIF3F-201ENST00000309828 CPDO75976 1380 aa18.44■□□□□ 0.54
EIF3F-201ENST00000309828 CALD1Q05682 793 aaKnown RBP18.44■□□□□ 0.54
EIF3F-201ENST00000309828 AEBP1Q8IUX7 1158 aa18.44■□□□□ 0.54
EIF3F-201ENST00000309828 RCAN3Q9UKA8 241 aa18.44■□□□□ 0.54
EIF3F-201ENST00000309828 UBAP1LF5GYI3 381 aa18.43■□□□□ 0.54
EIF3F-201ENST00000309828 MYH16Q9H6N6 1097 aa18.43■□□□□ 0.54
EIF3F-201ENST00000309828 ROBO1Q9Y6N7 1651 aa18.42■□□□□ 0.54
EIF3F-201ENST00000309828 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
EIF3F-201ENST00000309828 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
EIF3F-201ENST00000309828 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
EIF3F-201ENST00000309828 ZBTB7CA1YPR0 619 aa18.4■□□□□ 0.54
EIF3F-201ENST00000309828 LTV1Q96GA3 475 aaPredicted RBP18.4■□□□□ 0.54
EIF3F-201ENST00000309828 CAMTA1Q9Y6Y1 1673 aa18.4■□□□□ 0.54
EIF3F-201ENST00000309828 COL18A1P39060 1754 aa18.39■□□□□ 0.53
EIF3F-201ENST00000309828 TOM1O60784 492 aa18.38■□□□□ 0.53
EIF3F-201ENST00000309828 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
EIF3F-201ENST00000309828 FKBP8Q14318 412 aa18.38■□□□□ 0.53
EIF3F-201ENST00000309828 GAS2L2Q8NHY3 880 aa18.38■□□□□ 0.53
EIF3F-201ENST00000309828 ANKRD24Q8TF21 1146 aa18.38■□□□□ 0.53
EIF3F-201ENST00000309828 LRRC59Q96AG4 307 aaKnown RBP18.38■□□□□ 0.53
EIF3F-201ENST00000309828 ABCA3Q99758 1704 aa18.37■□□□□ 0.53
EIF3F-201ENST00000309828 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
EIF3F-201ENST00000309828 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
EIF3F-201ENST00000309828 CT47B1P0C2W7 299 aaPredicted RBP18.36■□□□□ 0.53
EIF3F-201ENST00000309828 ERBB3P21860 1342 aa18.36■□□□□ 0.53
EIF3F-201ENST00000309828 NBPF6Q5VWK0 638 aa18.36■□□□□ 0.53
EIF3F-201ENST00000309828 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
EIF3F-201ENST00000309828 NBPF4Q96M43 638 aa18.36■□□□□ 0.53
EIF3F-201ENST00000309828 DLG5Q8TDM6 1919 aa18.35■□□□□ 0.53
EIF3F-201ENST00000309828 LMO7Q8WWI1 1683 aa18.35■□□□□ 0.53
EIF3F-201ENST00000309828 KIAA0232Q92628 1395 aa18.35■□□□□ 0.53
EIF3F-201ENST00000309828 PLEKHG2Q9H7P9 1386 aa18.35■□□□□ 0.53
EIF3F-201ENST00000309828 HTATSF1O43719 755 aaKnown RBP18.35■□□□□ 0.53
EIF3F-201ENST00000309828 RRP1P56182 461 aaKnown RBP18.35■□□□□ 0.53
EIF3F-201ENST00000309828 AXIN2Q9Y2T1 843 aa18.35■□□□□ 0.53
EIF3F-201ENST00000309828 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
EIF3F-201ENST00000309828 FANCIQ9NVI1 1328 aa18.33■□□□□ 0.53
EIF3F-201ENST00000309828 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
EIF3F-201ENST00000309828 GNAI1P63096 354 aa18.33■□□□□ 0.52
EIF3F-201ENST00000309828 MTHFSDQ2M296 383 aaKnown RBP18.33■□□□□ 0.52
EIF3F-201ENST00000309828 IFT57Q9NWB7 429 aa18.33■□□□□ 0.52
EIF3F-201ENST00000309828 RGPD5Q99666 1765 aa18.32■□□□□ 0.52
EIF3F-201ENST00000309828 ZNF853P0CG23 659 aa18.31■□□□□ 0.52
EIF3F-201ENST00000309828 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.31■□□□□ 0.52
EIF3F-201ENST00000309828 PRDM11Q9NQV5 511 aa18.31■□□□□ 0.52
EIF3F-201ENST00000309828 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
EIF3F-201ENST00000309828 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
EIF3F-201ENST00000309828 USHBP1Q8N6Y0 703 aa18.3■□□□□ 0.52
EIF3F-201ENST00000309828 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
EIF3F-201ENST00000309828 CFAP44Q96MT7 982 aa18.3■□□□□ 0.52
EIF3F-201ENST00000309828 PHLPP1O60346 1717 aa18.29■□□□□ 0.52
EIF3F-201ENST00000309828 PLEKHO1Q53GL0 409 aaPredicted RBP18.29■□□□□ 0.52
EIF3F-201ENST00000309828 COL16A1Q07092 1604 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms