RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.32
SHANK2-AS3-201ENST00000307548 RTL1A6NKG5 1358 aa17.02■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 CPDO75976 1380 aa17.02■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 NCBP3Q53F19 620 aaKnown RBP17.01■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 FLT4P35916 1363 aa17.01■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 PPM1GO15355 546 aaPredicted RBP17■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 PLEKHG5O94827 1062 aa17■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 COL18A1P39060 1754 aa16.99■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 HOXC9P31274 260 aa16.99■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 IP6K1Q92551 441 aa16.99■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 RUNDC1Q96C34 613 aa16.99■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 ABCC6O95255 1503 aa16.99■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 HSP90AB2PQ58FF8 381 aa16.98■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 KIAA0232Q92628 1395 aa16.98■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 IL13P35225 146 aa16.97■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 AMPHP49418 695 aa16.97■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 JCADQ9P266 1359 aa16.97■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 PNNQ9H307 717 aaKnown RBP16.97■□□□□ 0.31
SHANK2-AS3-201ENST00000307548 LMO7Q8WWI1 1683 aa16.95■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 FCHSD2O94868 740 aa16.95■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 RGPD1P0DJD0 1748 aa16.95■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 APAF1O14727 1248 aa16.94■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 CCDC146Q8IYE0 955 aa16.94■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 PLEKHF1Q96S99 279 aa16.94■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 AXIN2Q9Y2T1 843 aa16.94■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 U2SURPO15042 1029 aaKnown RBP16.93■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 HAP1P54257 671 aaPredicted RBP16.92■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 CHRNA2Q15822 529 aa16.92■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 ZBTB7CA1YPR0 619 aa16.91■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 CCDC27Q2M243 656 aa16.91■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 PRDM11Q9NQV5 511 aa16.91■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 CAMTA1Q9Y6Y1 1673 aa16.91■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 RGPD5Q99666 1765 aa16.91■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 ILDR2Q71H61 639 aa16.91■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 TCP11L2Q8N4U5 519 aa16.91■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 FAM83GA6ND36 823 aa16.9■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 SPATA31A6Q5VVP1 1343 aa16.9■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 COL14A1Q05707 1796 aaKnown RBP16.9■□□□□ 0.3
SHANK2-AS3-201ENST00000307548 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 ERBB3P21860 1342 aa16.89■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 NCAPD2Q15021 1401 aa16.88■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 LRP6O75581 1613 aa16.88■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 EYA1Q99502 592 aa16.88■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 COL5A2P05997 1499 aaPredicted RBP16.87■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 KDRP35968 1356 aa16.87■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 GOLGA2Q08379 1002 aa16.87■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 TRMT2AQ8IZ69 625 aaKnown RBP16.86■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 GTF3C3Q9Y5Q9 886 aa16.86■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 MAPK8IP3Q9UPT6 1336 aa16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 NUTM2BA6NNL0 878 aaPredicted RBP16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 NUTM2EB1AL46 878 aaPredicted RBP16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 WDR63Q8IWG1 891 aa16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 RGPD2P0DJD1 1756 aa16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 ADAMTS2O95450 1211 aa16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 TMPOP42166 694 aaKnown RBP16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 PLCH1Q4KWH8 1693 aa16.84■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 NEFMP07197 916 aa16.84■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 SLFN5Q08AF3 891 aa16.84■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 CDCA7LQ96GN5 454 aa16.84■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 SLIT2O94813 1529 aa16.83■□□□□ 0.29
SHANK2-AS3-201ENST00000307548 HMOX1P09601 288 aa16.83■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 RGS17Q9UGC6 210 aaPredicted RBP16.83■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 WDR17Q8IZU2 1322 aa16.82■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 E9PSI1 815 aa16.82■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 DUSP27Q5VZP5 1158 aa16.81■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 BTG4Q9NY30 223 aa16.81■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 NWD2Q9ULI1 1742 aa16.81■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 USHBP1Q8N6Y0 703 aa16.8■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 SUPT16HQ9Y5B9 1047 aaKnown RBP16.8■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 RNF123Q5XPI4 1314 aa16.8■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 TRIM35Q9UPQ4 493 aa16.79■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 RIPK4P57078 832 aa16.78■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 IL16Q14005 1332 aa16.78■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
SHANK2-AS3-201ENST00000307548 LARP1Q6PKG0 1096 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms