RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 TRIM27P14373 513 aa6.61□□□□□ -1.35
USP8-201ENST00000307179 CREBRFQ8IUR6 639 aa6.61□□□□□ -1.35
USP8-201ENST00000307179 GLI2P10070 1586 aa6.6□□□□□ -1.35
USP8-201ENST00000307179 SSFA2P28290 1259 aa6.6□□□□□ -1.35
USP8-201ENST00000307179 RBM10P98175 930 aaKnown RBP6.6□□□□□ -1.35
USP8-201ENST00000307179 ITPRIPQ8IWB1 547 aa6.6□□□□□ -1.35
USP8-201ENST00000307179 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.6□□□□□ -1.35
USP8-201ENST00000307179 ITSN1Q15811 1721 aa6.6□□□□□ -1.35
USP8-201ENST00000307179 PIK3C2BO00750 1634 aa6.6□□□□□ -1.35
USP8-201ENST00000307179 N4BP2Q86UW6 1770 aaPredicted RBP6.6□□□□□ -1.35
USP8-201ENST00000307179 EPB41L2O43491 1005 aaKnown RBP6.6□□□□□ -1.35
USP8-201ENST00000307179 AK9Q5TCS8 1911 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 PDCL2Q8N4E4 241 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 PIBF1Q8WXW3 757 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 DIAPH3Q9NSV4 1193 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 HECW2Q9P2P5 1572 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 CHMP7Q8WUX9 453 aaPredicted RBP6.59□□□□□ -1.35
USP8-201ENST00000307179 FEZ1Q99689 392 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 CARD14Q9BXL6 1004 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 RPGRIP1LQ68CZ1 1315 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 SSH2Q76I76 1423 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 INTS3Q68E01 1043 aaKnown RBP6.59□□□□□ -1.35
USP8-201ENST00000307179 TSPY26PQ9H489 355 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 SPTLC3Q9NUV7 552 aa6.59□□□□□ -1.35
USP8-201ENST00000307179 TBC1D9Q6ZT07 1266 aa6.58□□□□□ -1.36
USP8-201ENST00000307179 RBSNQ9H1K0 784 aa6.58□□□□□ -1.36
USP8-201ENST00000307179 CAVIN1Q6NZI2 390 aaKnown RBP6.58□□□□□ -1.36
USP8-201ENST00000307179 GAS2L2Q8NHY3 880 aa6.58□□□□□ -1.36
USP8-201ENST00000307179 NEXMIFQ5QGS0 1516 aa6.58□□□□□ -1.36
USP8-201ENST00000307179 CHAF1AQ13111 956 aaPredicted RBP6.58□□□□□ -1.36
USP8-201ENST00000307179 CDK12Q9NYV4 1490 aaPredicted RBP6.58□□□□□ -1.36
USP8-201ENST00000307179 REC8O95072 547 aa6.58□□□□□ -1.36
USP8-201ENST00000307179 GABPB1Q06547 395 aaPredicted RBP6.58□□□□□ -1.36
USP8-201ENST00000307179 MCTP1Q6DN14 999 aa6.58□□□□□ -1.36
USP8-201ENST00000307179 IL17RAQ96F46 866 aa6.58□□□□□ -1.36
USP8-201ENST00000307179 TULP4Q9NRJ4 1543 aa6.58□□□□□ -1.36
USP8-201ENST00000307179 CD109Q6YHK3 1445 aa6.57□□□□□ -1.36
USP8-201ENST00000307179 HAP1P54257 671 aaPredicted RBP6.57□□□□□ -1.36
USP8-201ENST00000307179 INTS4Q96HW7 963 aaKnown RBP6.57□□□□□ -1.36
USP8-201ENST00000307179 ZSCAN20P17040 1043 aaPredicted RBP6.57□□□□□ -1.36
USP8-201ENST00000307179 KIF3AQ9Y496 699 aa6.57□□□□□ -1.36
USP8-201ENST00000307179 ABCC4O15439 1325 aa6.57□□□□□ -1.36
USP8-201ENST00000307179 XPCQ01831 940 aaPredicted RBP6.57□□□□□ -1.36
USP8-201ENST00000307179 EFCAB2Q5VUJ9 269 aa6.57□□□□□ -1.36
USP8-201ENST00000307179 TMEM57Q8N5G2 664 aa6.57□□□□□ -1.36
USP8-201ENST00000307179 TMEM87AQ8NBN3 555 aa6.57□□□□□ -1.36
USP8-201ENST00000307179 SSH1Q8WYL5 1049 aa6.57□□□□□ -1.36
USP8-201ENST00000307179 CAMSAP1Q5T5Y3 1602 aa6.57□□□□□ -1.36
USP8-201ENST00000307179 FAM135BQ49AJ0 1406 aa6.56□□□□□ -1.36
USP8-201ENST00000307179 PTMAP06454 111 aaKnown RBP6.56□□□□□ -1.36
USP8-201ENST00000307179 FGD1P98174 961 aa6.56□□□□□ -1.36
USP8-201ENST00000307179 FKBP5Q13451 457 aaPredicted RBP6.56□□□□□ -1.36
USP8-201ENST00000307179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.56□□□□□ -1.361e-6■■□□□ 14.3
USP8-201ENST00000307179 USP25Q9UHP3 1055 aa6.56□□□□□ -1.36
USP8-201ENST00000307179 KNDC1Q76NI1 1749 aa6.56□□□□□ -1.36
USP8-201ENST00000307179 LRRC7Q96NW7 1537 aa6.56□□□□□ -1.36
USP8-201ENST00000307179 CHD2O14647 1828 aaKnown RBP6.56□□□□□ -1.36
USP8-201ENST00000307179 CPSF1Q10570 1443 aaKnown RBP6.56□□□□□ -1.36
USP8-201ENST00000307179 PRIM1P49642 420 aaKnown RBP6.56□□□□□ -1.36
USP8-201ENST00000307179 EXOSC9Q06265 439 aaKnown RBP6.56□□□□□ -1.36
USP8-201ENST00000307179 PLEKHF1Q96S99 279 aa6.56□□□□□ -1.36
USP8-201ENST00000307179 API5Q9BZZ5 524 aaKnown RBP6.56□□□□□ -1.36
USP8-201ENST00000307179 NOB1Q9ULX3 412 aaKnown RBP6.56□□□□□ -1.36
USP8-201ENST00000307179 UGGT1Q9NYU2 1555 aa6.56□□□□□ -1.36
USP8-201ENST00000307179 GOLGA6L6A8MZA4 724 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 PDIA4P13667 645 aaKnown RBP6.55□□□□□ -1.36
USP8-201ENST00000307179 TMPOP42166 694 aaKnown RBP6.55□□□□□ -1.36
USP8-201ENST00000307179 ANAPC15P60006 121 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 TTC22Q5TAA0 569 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 PNPLA6Q8IY17 1366 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 TNNQ9UQP3 1299 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 CHD1O14646 1710 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 VGFO15240 615 aaPredicted RBP6.55□□□□□ -1.36
USP8-201ENST00000307179 EVC2Q86UK5 1308 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 GPT2Q8TD30 523 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 ANKRD7Q92527 254 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 USP26Q9BXU7 913 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 LNPKQ9C0E8 428 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 TSPYL1Q9H0U9 437 aa6.55□□□□□ -1.36
USP8-201ENST00000307179 MCCP23508 829 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 MTHFSP49914 203 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP8-201ENST00000307179 CCDC66A2RUB6 948 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 PPP4R3BQ5MIZ7 849 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 OGFRQ9NZT2 677 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 DLG5Q8TDM6 1919 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 SPAG9O60271 1321 aaKnown RBP6.54□□□□□ -1.36
USP8-201ENST00000307179 ZBTB7BO15156 539 aaPredicted RBP6.54□□□□□ -1.36
USP8-201ENST00000307179 CTIFO43310 598 aaKnown RBP6.54□□□□□ -1.36
USP8-201ENST00000307179 BRD1O95696 1058 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 U2AF1L5P0DN76 240 aaPredicted RBP6.54□□□□□ -1.36
USP8-201ENST00000307179 U2AF1Q01081 240 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP8-201ENST00000307179 SLC20A2Q08357 652 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 CUL4AQ13619 759 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 NOLC1Q14978 699 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP8-201ENST00000307179 BCL2L13Q9BXK5 485 aa6.54□□□□□ -1.36
USP8-201ENST00000307179 CD2BP2O95400 341 aaKnown RBP6.53□□□□□ -1.36
USP8-201ENST00000307179 LMOD3Q0VAK6 560 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 ANKRD45Q5TZF3 282 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 TRIM35Q9UPQ4 493 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms