RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CDCA7Q9BWT1 371 aaPredicted RBP10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 NUTM2BA6NNL0 878 aaPredicted RBP10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 NUTM2EB1AL46 878 aaPredicted RBP10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 CDR1P51861 262 aa10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 NUTM2AQ8IVF1 878 aaPredicted RBP10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 ERICH2A1L162 156 aa10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 TBC1D2BQ9UPU7 963 aa10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 NOS1P29475 1434 aa10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 DZIP1LQ8IYY4 767 aaKnown RBP10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 TET3O43151 1660 aa10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 UBAP1LF5GYI3 381 aa10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 AMER1Q5JTC6 1135 aaPredicted RBP10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 UBTFL1P0CB47 393 aaPredicted RBP10.06□□□□□ -0.8
PCDHB1-201ENST00000306549 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
PCDHB1-201ENST00000306549 NSD3Q9BZ95 1437 aa10.06□□□□□ -0.8
PCDHB1-201ENST00000306549 A0A087WZG4 1122 aa10.06□□□□□ -0.8
PCDHB1-201ENST00000306549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 GNAT3A8MTJ3 354 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 TBX22Q9Y458 520 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 APAF1O14727 1248 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 RALGAPBQ86X10 1494 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 BECN2A8MW95 431 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 KDM5CP41229 1560 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 ABCC1P33527 1531 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 TMOD3Q9NYL9 352 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 EXOC5O00471 708 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 ZPR1O75312 459 aa10.05□□□□□ -0.8
PCDHB1-201ENST00000306549 LMTK3Q96Q04 1460 aa10.04□□□□□ -0.8
PCDHB1-201ENST00000306549 ARHGEF10O15013 1369 aa10.04□□□□□ -0.8
PCDHB1-201ENST00000306549 NLRP1Q9C000 1473 aa10.04□□□□□ -0.8
PCDHB1-201ENST00000306549 SPHKAPQ2M3C7 1700 aa10.04□□□□□ -0.8
PCDHB1-201ENST00000306549 MLH3Q9UHC1 1453 aa10.04□□□□□ -0.8
PCDHB1-201ENST00000306549 MAGI3Q5TCQ9 1506 aa10.04□□□□□ -0.8
PCDHB1-201ENST00000306549 SMARCC1Q92922 1105 aaPredicted RBP10.04□□□□□ -0.8
PCDHB1-201ENST00000306549 ANKRD36BQ8N2N9 1353 aa10.04□□□□□ -0.8
PCDHB1-201ENST00000306549 CLASRPQ8N2M8 674 aaKnown RBP10.04□□□□□ -0.8
PCDHB1-201ENST00000306549 ZSCAN25Q6NSZ9 544 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 HMOX1P09601 288 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 KRT28Q7Z3Y7 464 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 SLC12A5Q9H2X9 1139 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 TRAPPC8Q9Y2L5 1435 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 APPP05067 770 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 SART3Q15020 963 aaKnown RBP10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 SULT6B1Q6IMI4 303 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 CPLX1O14810 134 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 NUTM2GQ5VZR2 741 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 PPIP5K1Q6PFW1 1433 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 PRKAR2BP31323 418 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 HDGFL1Q5TGJ6 251 aa10.03□□□□□ -0.8
PCDHB1-201ENST00000306549 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.8
PCDHB1-201ENST00000306549 ZNF287Q9HBT7 754 aa10.02□□□□□ -0.81
PCDHB1-201ENST00000306549 BTBD11A6QL63 1104 aa10.02□□□□□ -0.81
PCDHB1-201ENST00000306549 XBP1P17861 261 aa10.02□□□□□ -0.81
PCDHB1-201ENST00000306549 CALRP27797 417 aaKnown RBP10.02□□□□□ -0.81
PCDHB1-201ENST00000306549 PPP2R1AP30153 589 aa10.02□□□□□ -0.81
PCDHB1-201ENST00000306549 CCDC173Q0VFZ6 552 aa10.02□□□□□ -0.81
PCDHB1-201ENST00000306549 RRP7AQ9Y3A4 280 aaKnown RBP10.02□□□□□ -0.81
PCDHB1-201ENST00000306549 CCAR2Q8N163 923 aaKnown RBP10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 MPHOSPH8Q99549 860 aa10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 PDIA4P13667 645 aaKnown RBP10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 EPS15P42566 896 aa10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 SRCIN1Q9C0H9 1055 aa10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 SAFBQ15424 915 aaKnown RBP eCLIP10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 ZFYVE9O95405 1425 aa10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 ASXL1Q8IXJ9 1541 aa10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 MCTP1Q6DN14 999 aa10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 DDX54Q8TDD1 881 aaKnown RBP10.01□□□□□ -0.81
PCDHB1-201ENST00000306549 BRMS1Q9HCU9 246 aa10□□□□□ -0.81
PCDHB1-201ENST00000306549 RTN4Q9NQC3 1192 aaKnown RBP10□□□□□ -0.81
PCDHB1-201ENST00000306549 CCDC57Q2TAC2 916 aa10□□□□□ -0.81
PCDHB1-201ENST00000306549 EFCAB6Q5THR3 1501 aa10□□□□□ -0.81
PCDHB1-201ENST00000306549 GOLGA6L3A6NEY3 463 aa10□□□□□ -0.81
PCDHB1-201ENST00000306549 GNAI2P04899 355 aa10□□□□□ -0.81
PCDHB1-201ENST00000306549 IL27Q8NEV9 243 aa10□□□□□ -0.81
PCDHB1-201ENST00000306549 MYO6Q9UM54 1294 aa10□□□□□ -0.81
PCDHB1-201ENST00000306549 SLF2Q8IX21 1173 aa10□□□□□ -0.81
PCDHB1-201ENST00000306549 ABCA9Q8IUA7 1624 aa10□□□□□ -0.81
PCDHB1-201ENST00000306549 FBXO31Q5XUX0 539 aaPredicted RBP10□□□□□ -0.81
PCDHB1-201ENST00000306549 RALYLQ86SE5 291 aaKnown RBP10□□□□□ -0.81
PCDHB1-201ENST00000306549 NFE2L2Q16236 605 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 NBPF1Q3BBV0 1214 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 ANKRD45Q5TZF3 282 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 NOL8Q76FK4 1167 aaKnown RBP9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 SOS1Q07889 1333 aaPredicted RBP9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 NFXL1Q6ZNB6 911 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 CDC42BPBQ9Y5S2 1711 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 FOXO3O43524 673 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 PDE3AQ14432 1141 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 RILPL2Q969X0 211 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 CCDC158Q5M9N0 1113 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 HYPKQ9NX55 129 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 SAMD9LQ8IVG5 1584 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 CNTROBQ8N137 903 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 TCP11L2Q8N4U5 519 aa9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 GZF1Q9H116 711 aaPredicted RBP9.99□□□□□ -0.81
PCDHB1-201ENST00000306549 CROCC2H7BZ55 1655 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms