RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 USP19O94966 1318 aa14.75□□□□□ -0.05
COL4A3-201ENST00000304990 FHDC1Q9C0D6 1143 aaPredicted RBP14.75□□□□□ -0.05
COL4A3-201ENST00000304990 C1QTNF8P60827 252 aa14.74□□□□□ -0.05
COL4A3-201ENST00000304990 SYT17Q9BSW7 474 aa14.74□□□□□ -0.05
COL4A3-201ENST00000304990 PLEKHG3A1L390 1219 aa14.73□□□□□ -0.05
COL4A3-201ENST00000304990 SRPK2P78362 688 aaKnown RBP14.73□□□□□ -0.05
COL4A3-201ENST00000304990 STAC3Q96MF2 364 aa14.73□□□□□ -0.05
COL4A3-201ENST00000304990 PTGER2P43116 358 aa14.72□□□□□ -0.05
COL4A3-201ENST00000304990 TXNRD1Q16881 649 aa14.72□□□□□ -0.05
COL4A3-201ENST00000304990 PTF1AQ7RTS3 328 aa14.72□□□□□ -0.05
COL4A3-201ENST00000304990 CSB-PGBD3P0DP91 1061 aa14.71□□□□□ -0.05
COL4A3-201ENST00000304990 NLRP6P59044 892 aa14.71□□□□□ -0.05
COL4A3-201ENST00000304990 SLC15A2Q16348 729 aa14.71□□□□□ -0.05
COL4A3-201ENST00000304990 MTFR1LQ9H019 292 aa14.71□□□□□ -0.05
COL4A3-201ENST00000304990 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
COL4A3-201ENST00000304990 CDCA7Q9BWT1 371 aaPredicted RBP14.7□□□□□ -0.06
COL4A3-201ENST00000304990 AATKQ6ZMQ8 1374 aa14.7□□□□□ -0.06
COL4A3-201ENST00000304990 GPR162Q16538 588 aa14.69□□□□□ -0.06
COL4A3-201ENST00000304990 IFFO2Q5TF58 517 aa14.69□□□□□ -0.06
COL4A3-201ENST00000304990 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
COL4A3-201ENST00000304990 PROM2Q8N271 834 aa14.69□□□□□ -0.06
COL4A3-201ENST00000304990 MARCH10Q8NA82 808 aaPredicted RBP14.69□□□□□ -0.06
COL4A3-201ENST00000304990 ARXQ96QS3 562 aa14.69□□□□□ -0.06
COL4A3-201ENST00000304990 RGPD5Q99666 1765 aa14.68□□□□□ -0.06
COL4A3-201ENST00000304990 GIGYF1O75420 1035 aaPredicted RBP14.68□□□□□ -0.06
COL4A3-201ENST00000304990 PELP1Q8IZL8 1130 aaKnown RBP14.68□□□□□ -0.06
COL4A3-201ENST00000304990 WDR17Q8IZU2 1322 aa14.67□□□□□ -0.06
COL4A3-201ENST00000304990 EXOC5O00471 708 aa14.67□□□□□ -0.06
COL4A3-201ENST00000304990 BRD4O60885 1362 aaPredicted RBP14.67□□□□□ -0.06
COL4A3-201ENST00000304990 CABP2Q9NPB3 220 aa14.66□□□□□ -0.06
COL4A3-201ENST00000304990 SLIT3O75094 1523 aa14.66□□□□□ -0.06
COL4A3-201ENST00000304990 COL18A1P39060 1754 aa14.65□□□□□ -0.06
COL4A3-201ENST00000304990 RAB3GAP2Q9H2M9 1393 aa14.65□□□□□ -0.06
COL4A3-201ENST00000304990 SOX12O15370 315 aa14.65□□□□□ -0.06
COL4A3-201ENST00000304990 KIAA1210Q9ULL0 1709 aa14.65□□□□□ -0.06
COL4A3-201ENST00000304990 QRICH2Q9H0J4 1663 aa14.65□□□□□ -0.06
COL4A3-201ENST00000304990 BCL9O00512 1426 aa14.64□□□□□ -0.07
COL4A3-201ENST00000304990 USP6P35125 1406 aa14.64□□□□□ -0.07
COL4A3-201ENST00000304990 NHSQ6T4R5 1651 aa14.64□□□□□ -0.07
COL4A3-201ENST00000304990 PIK3C2AO00443 1686 aa14.63□□□□□ -0.07
COL4A3-201ENST00000304990 AXIN2Q9Y2T1 843 aa14.63□□□□□ -0.07
COL4A3-201ENST00000304990 CPSF1Q10570 1443 aaKnown RBP14.62□□□□□ -0.07
COL4A3-201ENST00000304990 KCNH5Q8NCM2 988 aa14.62□□□□□ -0.07
COL4A3-201ENST00000304990 ACSBG1Q96GR2 724 aa14.62□□□□□ -0.07
COL4A3-201ENST00000304990 SGIP1Q9BQI5 828 aa14.62□□□□□ -0.07
COL4A3-201ENST00000304990 CARD10Q9BWT7 1032 aa14.62□□□□□ -0.07
COL4A3-201ENST00000304990 CABP1Q9NZU7 370 aa14.62□□□□□ -0.07
COL4A3-201ENST00000304990 KAT6BQ8WYB5 2073 aa14.62□□□□□ -0.07
COL4A3-201ENST00000304990 CENPJQ9HC77 1338 aaPredicted RBP14.62□□□□□ -0.07
COL4A3-201ENST00000304990 POLD1P28340 1107 aa14.6□□□□□ -0.07
COL4A3-201ENST00000304990 CCDC7Q96M83 1385 aa14.6□□□□□ -0.07
COL4A3-201ENST00000304990 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
COL4A3-201ENST00000304990 BTAF1O14981 1849 aa14.59□□□□□ -0.07
COL4A3-201ENST00000304990 TNS2Q63HR2 1409 aa14.59□□□□□ -0.07
COL4A3-201ENST00000304990 ARHGEF25Q86VW2 580 aa14.58□□□□□ -0.08
COL4A3-201ENST00000304990 PAPPAQ13219 1627 aa14.57□□□□□ -0.08
COL4A3-201ENST00000304990 TRPM1Q7Z4N2 1603 aa14.57□□□□□ -0.08
COL4A3-201ENST00000304990 NBPF1Q3BBV0 1214 aa14.57□□□□□ -0.08
COL4A3-201ENST00000304990 ABCC6O95255 1503 aa14.56□□□□□ -0.08
COL4A3-201ENST00000304990 ZNF827Q17R98 1081 aa14.55□□□□□ -0.08
COL4A3-201ENST00000304990 SLC16A10Q8TF71 515 aa14.55□□□□□ -0.08
COL4A3-201ENST00000304990 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
COL4A3-201ENST00000304990 RNF39Q9H2S5 420 aa14.55□□□□□ -0.08
COL4A3-201ENST00000304990 NLRP2Q9NX02 1062 aa14.55□□□□□ -0.08
COL4A3-201ENST00000304990 QSER1Q2KHR3 1735 aa14.55□□□□□ -0.08
COL4A3-201ENST00000304990 TTC21BQ7Z4L5 1316 aa14.54□□□□□ -0.08
COL4A3-201ENST00000304990 EVC2Q86UK5 1308 aa14.54□□□□□ -0.08
COL4A3-201ENST00000304990 SHANK3Q9BYB0 1731 aa14.54□□□□□ -0.08
COL4A3-201ENST00000304990 IL2RBP14784 551 aa14.53□□□□□ -0.08
COL4A3-201ENST00000304990 TTC21AQ8NDW8 1320 aa14.52□□□□□ -0.08
COL4A3-201ENST00000304990 GRIN3BO60391 1043 aa14.52□□□□□ -0.09
COL4A3-201ENST00000304990 TFCP2L1Q9NZI6 479 aa14.52□□□□□ -0.09
COL4A3-201ENST00000304990 LTN1O94822 1766 aa14.52□□□□□ -0.09
COL4A3-201ENST00000304990 SLC27A3Q5K4L6 730 aa14.51□□□□□ -0.09
COL4A3-201ENST00000304990 NLGN2Q8NFZ4 835 aa14.51□□□□□ -0.09
COL4A3-201ENST00000304990 LRRC4BQ9NT99 713 aa14.51□□□□□ -0.09
COL4A3-201ENST00000304990 NFAT5O94916 1531 aa14.51□□□□□ -0.09
COL4A3-201ENST00000304990 TUBGCP6Q96RT7 1819 aa14.5□□□□□ -0.09
COL4A3-201ENST00000304990 UTRNP46939 3433 aa14.5□□□□□ -0.09
COL4A3-201ENST00000304990 KTN1Q86UP2 1357 aaKnown RBP14.49□□□□□ -0.09
COL4A3-201ENST00000304990 DDX54Q8TDD1 881 aaKnown RBP14.49□□□□□ -0.09
COL4A3-201ENST00000304990 AKT1S1Q96B36 256 aa14.49□□□□□ -0.09
COL4A3-201ENST00000304990 SYTL4Q96C24 671 aaPredicted RBP14.49□□□□□ -0.09
COL4A3-201ENST00000304990 COL24A1Q17RW2 1714 aa14.49□□□□□ -0.09
COL4A3-201ENST00000304990 ERBB3P21860 1342 aa14.48□□□□□ -0.09
COL4A3-201ENST00000304990 PNPLA7Q6ZV29 1317 aa14.48□□□□□ -0.09
COL4A3-201ENST00000304990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.48□□□□□ -0.09
COL4A3-201ENST00000304990 GPBP1L1Q9HC44 474 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-201ENST00000304990 ATP10DQ9P241 1426 aa14.47□□□□□ -0.09
COL4A3-201ENST00000304990 MON2Q7Z3U7 1717 aa14.46□□□□□ -0.09
COL4A3-201ENST00000304990 YBX3P16989 372 aaKnown RBP eCLIP14.46□□□□□ -0.09
COL4A3-201ENST00000304990 KCNQ4P56696 695 aa14.46□□□□□ -0.09
COL4A3-201ENST00000304990 ANKRD24Q8TF21 1146 aa14.46□□□□□ -0.09
COL4A3-201ENST00000304990 ZNF526Q8TF50 670 aaPredicted RBP14.46□□□□□ -0.09
COL4A3-201ENST00000304990 DOT1LQ8TEK3 1739 aa14.45□□□□□ -0.1
COL4A3-201ENST00000304990 LY75O60449 1722 aa14.44□□□□□ -0.1
COL4A3-201ENST00000304990 HSPA6P17066 643 aa14.43□□□□□ -0.1
COL4A3-201ENST00000304990 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
COL4A3-201ENST00000304990 FAM208AQ9UK61 1670 aaKnown RBP14.42□□□□□ -0.1
COL4A3-201ENST00000304990 PRIM1P49642 420 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms