RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 NFAT5O94916 1531 aa15.27■□□□□ 0.03
HMGN1P35-201ENST00000303758 TNS1Q9HBL0 1735 aaKnown RBP15.26■□□□□ 0.03
HMGN1P35-201ENST00000303758 A0A1W2PP64 1363 aa15.26■□□□□ 0.03
HMGN1P35-201ENST00000303758 NINLQ9Y2I6 1382 aa15.26■□□□□ 0.03
HMGN1P35-201ENST00000303758 FAM182BQ5T319 152 aa15.26■□□□□ 0.03
HMGN1P35-201ENST00000303758 TCP11L2Q8N4U5 519 aa15.26■□□□□ 0.03
HMGN1P35-201ENST00000303758 PUS7Q96PZ0 661 aaKnown RBP15.26■□□□□ 0.03
HMGN1P35-201ENST00000303758 SLC12A5Q9H2X9 1139 aa15.26■□□□□ 0.03
HMGN1P35-201ENST00000303758 BAG6P46379 1132 aa15.25■□□□□ 0.03
HMGN1P35-201ENST00000303758 PDE3BQ13370 1112 aa15.25■□□□□ 0.03
HMGN1P35-201ENST00000303758 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
HMGN1P35-201ENST00000303758 DEFB132Q7Z7B7 95 aa15.25■□□□□ 0.03
HMGN1P35-201ENST00000303758 TESK2Q96S53 571 aa15.25■□□□□ 0.03
HMGN1P35-201ENST00000303758 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
HMGN1P35-201ENST00000303758 TIMELESSQ9UNS1 1208 aa15.25■□□□□ 0.03
HMGN1P35-201ENST00000303758 THRAP3Q9Y2W1 955 aaKnown RBP15.25■□□□□ 0.03
HMGN1P35-201ENST00000303758 ABCC6O95255 1503 aa15.25■□□□□ 0.03
HMGN1P35-201ENST00000303758 TMF1P82094 1093 aa15.24■□□□□ 0.03
HMGN1P35-201ENST00000303758 TOM1L2Q6ZVM7 507 aa15.24■□□□□ 0.03
HMGN1P35-201ENST00000303758 CSB-PGBD3P0DP91 1061 aa15.23■□□□□ 0.03
HMGN1P35-201ENST00000303758 ARHGEF25Q86VW2 580 aa15.23■□□□□ 0.03
HMGN1P35-201ENST00000303758 NME9Q86XW9 330 aa15.23■□□□□ 0.03
HMGN1P35-201ENST00000303758 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
HMGN1P35-201ENST00000303758 LRRC37A3O60309 1634 aa15.23■□□□□ 0.03
HMGN1P35-201ENST00000303758 USP31Q70CQ4 1352 aa15.23■□□□□ 0.03
HMGN1P35-201ENST00000303758 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
HMGN1P35-201ENST00000303758 WDR17Q8IZU2 1322 aa15.21■□□□□ 0.03
HMGN1P35-201ENST00000303758 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
HMGN1P35-201ENST00000303758 CDCA8Q53HL2 280 aa15.2■□□□□ 0.02
HMGN1P35-201ENST00000303758 AXIN2Q9Y2T1 843 aa15.2■□□□□ 0.02
HMGN1P35-201ENST00000303758 KIF20BQ96Q89 1820 aa15.2■□□□□ 0.02
HMGN1P35-201ENST00000303758 OVOS2A0A0J9YW53 1432 aa15.19■□□□□ 0.02
HMGN1P35-201ENST00000303758 OVOS2Q6IE36 1432 aa15.19■□□□□ 0.02
HMGN1P35-201ENST00000303758 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
HMGN1P35-201ENST00000303758 ANKRD36BQ8N2N9 1353 aa15.19■□□□□ 0.02
HMGN1P35-201ENST00000303758 TRIM37O94972 964 aa15.18■□□□□ 0.02
HMGN1P35-201ENST00000303758 MYOM1P52179 1685 aa15.18■□□□□ 0.02
HMGN1P35-201ENST00000303758 OVOS2A0A0G2JMS6 1433 aa15.17■□□□□ 0.02
HMGN1P35-201ENST00000303758 FAM208AQ9UK61 1670 aaKnown RBP15.17■□□□□ 0.02
HMGN1P35-201ENST00000303758 DDB1Q16531 1140 aa15.17■□□□□ 0.02
HMGN1P35-201ENST00000303758 CCDC7Q96M83 1385 aa15.16■□□□□ 0.02
HMGN1P35-201ENST00000303758 EN1Q05925 392 aaPredicted RBP15.16■□□□□ 0.02
HMGN1P35-201ENST00000303758 COG3Q96JB2 828 aa15.16■□□□□ 0.02
HMGN1P35-201ENST00000303758 CDCA7Q9BWT1 371 aaPredicted RBP15.16■□□□□ 0.02
HMGN1P35-201ENST00000303758 DISP2A7MBM2 1401 aa15.16■□□□□ 0.02
HMGN1P35-201ENST00000303758 SBF2Q86WG5 1849 aa15.15■□□□□ 0.02
HMGN1P35-201ENST00000303758 PEAK1Q9H792 1746 aa15.15■□□□□ 0.02
HMGN1P35-201ENST00000303758 C11orf95C9JLR9 678 aaPredicted RBP15.15■□□□□ 0.02
HMGN1P35-201ENST00000303758 CARD10Q9BWT7 1032 aa15.15■□□□□ 0.02
HMGN1P35-201ENST00000303758 RREB1Q92766 1687 aa15.14■□□□□ 0.01
HMGN1P35-201ENST00000303758 APBA3O96018 575 aa15.14■□□□□ 0.01
HMGN1P35-201ENST00000303758 ERBB3P21860 1342 aa15.14■□□□□ 0.01
HMGN1P35-201ENST00000303758 NLRP2Q9NX02 1062 aa15.13■□□□□ 0.01
HMGN1P35-201ENST00000303758 SRCAPQ6ZRS2 3230 aa15.12■□□□□ 0.01
HMGN1P35-201ENST00000303758 ANKRD24Q8TF21 1146 aa15.12■□□□□ 0.01
HMGN1P35-201ENST00000303758 NUP188Q5SRE5 1749 aa15.12■□□□□ 0.01
HMGN1P35-201ENST00000303758 PARD3Q8TEW0 1356 aa15.11■□□□□ 0.01
HMGN1P35-201ENST00000303758 EZH2Q15910 746 aaKnown RBP15.11■□□□□ 0.01
HMGN1P35-201ENST00000303758 POLR3GLQ9BT43 218 aa15.11■□□□□ 0.01
HMGN1P35-201ENST00000303758 RGPD3A6NKT7 1758 aaPredicted RBP15.11■□□□□ 0.01
HMGN1P35-201ENST00000303758 RGPD4Q7Z3J3 1758 aa15.11■□□□□ 0.01
HMGN1P35-201ENST00000303758 TNS2Q63HR2 1409 aa15.1■□□□□ 0.01
HMGN1P35-201ENST00000303758 EXOC5O00471 708 aa15.1■□□□□ 0.01
HMGN1P35-201ENST00000303758 AMPHP49418 695 aa15.1■□□□□ 0.01
HMGN1P35-201ENST00000303758 PSDA5PKW4 1024 aaPredicted RBP15.09■□□□□ 0.01
HMGN1P35-201ENST00000303758 LTV1Q96GA3 475 aaPredicted RBP15.09■□□□□ 0.01
HMGN1P35-201ENST00000303758 GGNBP2Q9H3C7 697 aa15.09■□□□□ 0.01
HMGN1P35-201ENST00000303758 NSD3Q9BZ95 1437 aa15.09■□□□□ 0.01
HMGN1P35-201ENST00000303758 RGPD2P0DJD1 1756 aa15.08■□□□□ 0.01
HMGN1P35-201ENST00000303758 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 0
HMGN1P35-201ENST00000303758 IP6K1Q92551 441 aa15.08■□□□□ 0
HMGN1P35-201ENST00000303758 MAP3K19Q56UN5 1328 aa15.08■□□□□ 0
HMGN1P35-201ENST00000303758 RTL1A6NKG5 1358 aa15.08■□□□□ 0
HMGN1P35-201ENST00000303758 DCAF8L1A6NGE4 600 aa15.07■□□□□ 0
HMGN1P35-201ENST00000303758 IL2RBP14784 551 aa15.07■□□□□ 0
HMGN1P35-201ENST00000303758 MARCH10Q8NA82 808 aaPredicted RBP15.07■□□□□ 0
HMGN1P35-201ENST00000303758 CAMKK2Q96RR4 588 aa15.07■□□□□ 0
HMGN1P35-201ENST00000303758 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
HMGN1P35-201ENST00000303758 LRP5O75197 1615 aa15.06■□□□□ 0
HMGN1P35-201ENST00000303758 FYB1O15117 783 aa15.06■□□□□ 0
HMGN1P35-201ENST00000303758 HOXC9P31274 260 aa15.06■□□□□ 0
HMGN1P35-201ENST00000303758 NHSQ6T4R5 1651 aa15.06■□□□□ 0
HMGN1P35-201ENST00000303758 ANKRD26Q9UPS8 1709 aa15.06■□□□□ 0
HMGN1P35-201ENST00000303758 R3HDM1Q15032 1099 aaKnown RBP15.05■□□□□ -0
HMGN1P35-201ENST00000303758 BCL9O00512 1426 aa15.04■□□□□ -0
HMGN1P35-201ENST00000303758 HSPA5P11021 654 aaKnown RBP15.04■□□□□ -0
HMGN1P35-201ENST00000303758 FBLN1P23142 703 aa15.04■□□□□ -0
HMGN1P35-201ENST00000303758 RRS1Q15050 365 aaKnown RBP15.04■□□□□ -0
HMGN1P35-201ENST00000303758 NBPF14Q5TI25 921 aa15.04■□□□□ -0
HMGN1P35-201ENST00000303758 BCL11BQ9C0K0 894 aaPredicted RBP15.03■□□□□ -0
HMGN1P35-201ENST00000303758 FLT4P35916 1363 aa15.01□□□□□ -0.01
HMGN1P35-201ENST00000303758 CGNL1Q0VF96 1302 aa15.01□□□□□ -0.01
HMGN1P35-201ENST00000303758 KAT6BQ8WYB5 2073 aa15.01□□□□□ -0.01
HMGN1P35-201ENST00000303758 NPM3O75607 178 aaKnown RBP15.01□□□□□ -0.01
HMGN1P35-201ENST00000303758 CARD14Q9BXL6 1004 aa15.01□□□□□ -0.01
HMGN1P35-201ENST00000303758 MAP2P11137 1827 aaKnown RBP15.01□□□□□ -0.01
HMGN1P35-201ENST00000303758 PLSCR1O15162 318 aa15□□□□□ -0.01
HMGN1P35-201ENST00000303758 BTAF1O14981 1849 aa15□□□□□ -0.01
HMGN1P35-201ENST00000303758 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
HMGN1P35-201ENST00000303758 SHANK3Q9BYB0 1731 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms