RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 RNF17Q9BXT8 1623 aaKnown RBP13.41□□□□□ -0.26
SNX20-201ENST00000300590 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
SNX20-201ENST00000300590 KANK1Q14678 1352 aa13.41□□□□□ -0.26
SNX20-201ENST00000300590 PTPRTO14522 1441 aa13.41□□□□□ -0.26
SNX20-201ENST00000300590 NOLC1Q14978 699 aaKnown RBP eCLIP13.41□□□□□ -0.26
SNX20-201ENST00000300590 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
SNX20-201ENST00000300590 INTS3Q68E01 1043 aaKnown RBP13.4□□□□□ -0.26
SNX20-201ENST00000300590 PLEKHF1Q96S99 279 aa13.4□□□□□ -0.26
SNX20-201ENST00000300590 CD109Q6YHK3 1445 aa13.39□□□□□ -0.27
SNX20-201ENST00000300590 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
SNX20-201ENST00000300590 HMOX1P09601 288 aa13.39□□□□□ -0.27
SNX20-201ENST00000300590 ZNF518AQ6AHZ1 1483 aa13.39□□□□□ -0.27
SNX20-201ENST00000300590 GADD45BO75293 160 aaPredicted RBP13.39□□□□□ -0.27
SNX20-201ENST00000300590 SDSP20132 328 aa13.39□□□□□ -0.27
SNX20-201ENST00000300590 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
SNX20-201ENST00000300590 KIF3AQ9Y496 699 aa13.39□□□□□ -0.27
SNX20-201ENST00000300590 DTNBO60941 627 aa13.38□□□□□ -0.27
SNX20-201ENST00000300590 STK26Q9P289 416 aa13.38□□□□□ -0.27
SNX20-201ENST00000300590 NAP1L2Q9ULW6 460 aaPredicted RBP13.38□□□□□ -0.27
SNX20-201ENST00000300590 ABCA8O94911 1581 aa13.38□□□□□ -0.27
SNX20-201ENST00000300590 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
SNX20-201ENST00000300590 TTC22Q5TAA0 569 aa13.38□□□□□ -0.27
SNX20-201ENST00000300590 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
SNX20-201ENST00000300590 SRPK2P78362 688 aaKnown RBP13.38□□□□□ -0.27
SNX20-201ENST00000300590 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
SNX20-201ENST00000300590 ATP10AO60312 1499 aa13.37□□□□□ -0.27
SNX20-201ENST00000300590 MBD3O95983 291 aa13.37□□□□□ -0.27
SNX20-201ENST00000300590 CDK11BP21127 795 aaKnown RBP13.37□□□□□ -0.27
SNX20-201ENST00000300590 NOS1P29475 1434 aa13.37□□□□□ -0.27
SNX20-201ENST00000300590 UNC13BO14795 1591 aa13.37□□□□□ -0.27
SNX20-201ENST00000300590 ADCY5O95622 1261 aa13.37□□□□□ -0.27
SNX20-201ENST00000300590 U2AF2P26368 475 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX20-201ENST00000300590 PRKAR2BP31323 418 aa13.37□□□□□ -0.27
SNX20-201ENST00000300590 EFCAB2Q5VUJ9 269 aa13.37□□□□□ -0.27
SNX20-201ENST00000300590 CEP152O94986 1710 aa13.37□□□□□ -0.27
SNX20-201ENST00000300590 ABCC11Q96J66 1382 aa13.37□□□□□ -0.27
SNX20-201ENST00000300590 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
SNX20-201ENST00000300590 TSHZ3Q63HK5 1081 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 TMX3Q96JJ7 454 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 IQGAP3Q86VI3 1631 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 VGLL3A8MV65 326 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 DIAPH1O60610 1272 aaKnown RBP13.36□□□□□ -0.27
SNX20-201ENST00000300590 ALDH1L2Q3SY69 923 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 PDCL2Q8N4E4 241 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 SHPRHQ149N8 1683 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 VAMP4O75379 141 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
SNX20-201ENST00000300590 MAST1Q9Y2H9 1570 aa13.35□□□□□ -0.27
SNX20-201ENST00000300590 CDC42BPBQ9Y5S2 1711 aa13.35□□□□□ -0.27
SNX20-201ENST00000300590 HMGN5P82970 282 aaKnown RBP13.35□□□□□ -0.27
SNX20-201ENST00000300590 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
SNX20-201ENST00000300590 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
SNX20-201ENST00000300590 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
SNX20-201ENST00000300590 UPF3BQ9BZI7 483 aaKnown RBP13.35□□□□□ -0.27
SNX20-201ENST00000300590 TTC37Q6PGP7 1564 aa13.34□□□□□ -0.27
SNX20-201ENST00000300590 PIBF1Q8WXW3 757 aa13.34□□□□□ -0.27
SNX20-201ENST00000300590 SYAP1Q96A49 352 aaPredicted RBP13.34□□□□□ -0.27
SNX20-201ENST00000300590 UGGT1Q9NYU2 1555 aa13.34□□□□□ -0.27
SNX20-201ENST00000300590 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
SNX20-201ENST00000300590 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
SNX20-201ENST00000300590 LARP6Q9BRS8 491 aaKnown RBP13.34□□□□□ -0.27
SNX20-201ENST00000300590 REC8O95072 547 aa13.33□□□□□ -0.28
SNX20-201ENST00000300590 ZNF771Q7L3S4 317 aaPredicted RBP13.33□□□□□ -0.28
SNX20-201ENST00000300590 USP48Q86UV5 1035 aa13.33□□□□□ -0.28
SNX20-201ENST00000300590 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.28
SNX20-201ENST00000300590 TRAPPC8Q9Y2L5 1435 aa13.33□□□□□ -0.28
SNX20-201ENST00000300590 TWISTNBQ3B726 338 aaPredicted RBP13.33□□□□□ -0.28
SNX20-201ENST00000300590 AEBP2Q6ZN18 517 aaPredicted RBP13.33□□□□□ -0.28
SNX20-201ENST00000300590 CGNQ9P2M7 1197 aaKnown RBP13.33□□□□□ -0.28
SNX20-201ENST00000300590 DCTN1Q14203 1278 aa13.32□□□□□ -0.28
SNX20-201ENST00000300590 C8orf58Q8NAV2 365 aa13.32□□□□□ -0.28
SNX20-201ENST00000300590 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
SNX20-201ENST00000300590 ZBTB22O15209 634 aa13.31□□□□□ -0.28
SNX20-201ENST00000300590 CHAF1AQ13111 956 aaPredicted RBP13.31□□□□□ -0.28
SNX20-201ENST00000300590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNX20-201ENST00000300590 EVC2Q86UK5 1308 aa13.31□□□□□ -0.28
SNX20-201ENST00000300590 ERC2O15083 957 aa13.31□□□□□ -0.28
SNX20-201ENST00000300590 DCTPP1Q9H773 170 aa13.31□□□□□ -0.28
SNX20-201ENST00000300590 ANO2Q9NQ90 1003 aa13.31□□□□□ -0.28
SNX20-201ENST00000300590 IL16Q14005 1332 aa13.31□□□□□ -0.28
SNX20-201ENST00000300590 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
SNX20-201ENST00000300590 GTF2E1P29083 439 aaPredicted RBP13.31□□□□□ -0.28
SNX20-201ENST00000300590 GTPBP4Q9BZE4 634 aaKnown RBP13.31□□□□□ -0.28
SNX20-201ENST00000300590 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
SNX20-201ENST00000300590 KRT24Q2M2I5 525 aa13.3□□□□□ -0.28
SNX20-201ENST00000300590 RILPL2Q969X0 211 aa13.3□□□□□ -0.28
SNX20-201ENST00000300590 MBIPQ9NS73 344 aa13.3□□□□□ -0.28
SNX20-201ENST00000300590 CLTCL1P53675 1640 aa13.3□□□□□ -0.28
SNX20-201ENST00000300590 FAM83GA6ND36 823 aa13.3□□□□□ -0.28
SNX20-201ENST00000300590 BRD1O95696 1058 aa13.3□□□□□ -0.28
SNX20-201ENST00000300590 CFAP74Q9C0B2 1584 aa13.3□□□□□ -0.28
SNX20-201ENST00000300590 PALD1Q9ULE6 856 aa13.3□□□□□ -0.28
SNX20-201ENST00000300590 PHF14O94880 888 aa13.29□□□□□ -0.28
SNX20-201ENST00000300590 PYCARDQ9ULZ3 195 aa13.29□□□□□ -0.28
SNX20-201ENST00000300590 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
SNX20-201ENST00000300590 GIMAP6Q6P9H5 292 aa13.29□□□□□ -0.28
SNX20-201ENST00000300590 FYB1O15117 783 aa13.29□□□□□ -0.28
SNX20-201ENST00000300590 FIBPO43427 364 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms