RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 SPATA31A3Q5VYP0 1347 aa24.39■■□□□ 1.49
SEC61A2-201ENST00000298428 PLEKHG5O94827 1062 aa24.38■■□□□ 1.49
SEC61A2-201ENST00000298428 RRP7AQ9Y3A4 280 aaKnown RBP24.38■■□□□ 1.49
SEC61A2-201ENST00000298428 PRKAR2BP31323 418 aa24.38■■□□□ 1.49
SEC61A2-201ENST00000298428 CDCA7LQ96GN5 454 aa24.38■■□□□ 1.49
SEC61A2-201ENST00000298428 NEUROD2Q15784 382 aa24.37■■□□□ 1.49
SEC61A2-201ENST00000298428 AEBP2Q6ZN18 517 aaPredicted RBP24.37■■□□□ 1.49
SEC61A2-201ENST00000298428 ARHGEF10O15013 1369 aa24.37■■□□□ 1.49
SEC61A2-201ENST00000298428 SOS2Q07890 1332 aaPredicted RBP24.37■■□□□ 1.49
SEC61A2-201ENST00000298428 MED1Q15648 1581 aaPredicted RBP24.36■■□□□ 1.49
SEC61A2-201ENST00000298428 RGPD1P0DJD0 1748 aa24.36■■□□□ 1.49
SEC61A2-201ENST00000298428 NEFMP07197 916 aa24.36■■□□□ 1.49
SEC61A2-201ENST00000298428 GOLGA2Q08379 1002 aa24.35■■□□□ 1.49
SEC61A2-201ENST00000298428 NCBP3Q53F19 620 aaKnown RBP24.35■■□□□ 1.49
SEC61A2-201ENST00000298428 PHRF1Q9P1Y6 1649 aaKnown RBP24.35■■□□□ 1.49
SEC61A2-201ENST00000298428 IP6K1Q92551 441 aa24.34■■□□□ 1.49
SEC61A2-201ENST00000298428 NHSL1Q5SYE7 1610 aa24.34■■□□□ 1.49
SEC61A2-201ENST00000298428 WWC1Q8IX03 1113 aa24.34■■□□□ 1.49
SEC61A2-201ENST00000298428 ZBTB7CA1YPR0 619 aa24.33■■□□□ 1.49
SEC61A2-201ENST00000298428 CCDC27Q2M243 656 aa24.33■■□□□ 1.49
SEC61A2-201ENST00000298428 ARHGEF25Q86VW2 580 aa24.33■■□□□ 1.49
SEC61A2-201ENST00000298428 TMPOP42166 694 aaKnown RBP24.32■■□□□ 1.48
SEC61A2-201ENST00000298428 SULT6B1Q6IMI4 303 aa24.32■■□□□ 1.48
SEC61A2-201ENST00000298428 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
SEC61A2-201ENST00000298428 AEBP1Q8IUX7 1158 aa24.31■■□□□ 1.48
SEC61A2-201ENST00000298428 SUPT16HQ9Y5B9 1047 aaKnown RBP24.3■■□□□ 1.48
SEC61A2-201ENST00000298428 PHACTR3Q96KR7 559 aa24.29■■□□□ 1.48
SEC61A2-201ENST00000298428 IGSF1Q8N6C5 1336 aa24.29■■□□□ 1.48
SEC61A2-201ENST00000298428 ROBO1Q9Y6N7 1651 aa24.29■■□□□ 1.48
SEC61A2-201ENST00000298428 CRYBG1Q9Y4K1 1723 aa24.29■■□□□ 1.48
SEC61A2-201ENST00000298428 LTV1Q96GA3 475 aaPredicted RBP24.28■■□□□ 1.48
SEC61A2-201ENST00000298428 EYA1Q99502 592 aa24.28■■□□□ 1.48
SEC61A2-201ENST00000298428 SLFN5Q08AF3 891 aa24.28■■□□□ 1.48
SEC61A2-201ENST00000298428 CABLES1Q8TDN4 633 aa24.28■■□□□ 1.48
SEC61A2-201ENST00000298428 RIPK4P57078 832 aa24.27■■□□□ 1.48
SEC61A2-201ENST00000298428 E9PSI1 815 aa24.26■■□□□ 1.47
SEC61A2-201ENST00000298428 ZC3H6P61129 1189 aaKnown RBP24.26■■□□□ 1.47
SEC61A2-201ENST00000298428 KDRP35968 1356 aa24.26■■□□□ 1.47
SEC61A2-201ENST00000298428 NFE2L2Q16236 605 aa24.26■■□□□ 1.47
SEC61A2-201ENST00000298428 DUSP27Q5VZP5 1158 aa24.26■■□□□ 1.47
SEC61A2-201ENST00000298428 WDR63Q8IWG1 891 aa24.26■■□□□ 1.47
SEC61A2-201ENST00000298428 SPINK5Q9NQ38 1064 aaPredicted RBP24.25■■□□□ 1.47
SEC61A2-201ENST00000298428 TRIM35Q9UPQ4 493 aa24.24■■□□□ 1.47
SEC61A2-201ENST00000298428 TRMT2AQ8IZ69 625 aaKnown RBP24.24■■□□□ 1.47
SEC61A2-201ENST00000298428 NEFLP07196 543 aa24.22■■□□□ 1.47
SEC61A2-201ENST00000298428 AHDC1Q5TGY3 1603 aaPredicted RBP24.22■■□□□ 1.47
SEC61A2-201ENST00000298428 AXIN2Q9Y2T1 843 aa24.2■■□□□ 1.46
SEC61A2-201ENST00000298428 CPDO75976 1380 aa24.19■■□□□ 1.46
SEC61A2-201ENST00000298428 ANKRD24Q8TF21 1146 aa24.19■■□□□ 1.46
SEC61A2-201ENST00000298428 RCAN3Q9UKA8 241 aa24.19■■□□□ 1.46
SEC61A2-201ENST00000298428 KIAA0232Q92628 1395 aa24.18■■□□□ 1.46
SEC61A2-201ENST00000298428 TOM1O60784 492 aa24.18■■□□□ 1.46
SEC61A2-201ENST00000298428 ABCC6O95255 1503 aa24.18■■□□□ 1.46
SEC61A2-201ENST00000298428 NBPF6Q5VWK0 638 aa24.17■■□□□ 1.46
SEC61A2-201ENST00000298428 NBPF4Q96M43 638 aa24.17■■□□□ 1.46
SEC61A2-201ENST00000298428 ABCA3Q99758 1704 aa24.17■■□□□ 1.46
SEC61A2-201ENST00000298428 HAP1P54257 671 aaPredicted RBP24.17■■□□□ 1.46
SEC61A2-201ENST00000298428 USHBP1Q8N6Y0 703 aa24.17■■□□□ 1.46
SEC61A2-201ENST00000298428 COL18A1P39060 1754 aa24.16■■□□□ 1.46
SEC61A2-201ENST00000298428 RGPD5Q99666 1765 aa24.16■■□□□ 1.46
SEC61A2-201ENST00000298428 LMOD3Q0VAK6 560 aa24.16■■□□□ 1.46
SEC61A2-201ENST00000298428 LRRC59Q96AG4 307 aaKnown RBP24.16■■□□□ 1.46
SEC61A2-201ENST00000298428 DLG5Q8TDM6 1919 aa24.16■■□□□ 1.46
SEC61A2-201ENST00000298428 ERBB3P21860 1342 aa24.15■■□□□ 1.46
SEC61A2-201ENST00000298428 RGPD2P0DJD1 1756 aa24.15■■□□□ 1.46
SEC61A2-201ENST00000298428 FKBP8Q14318 412 aa24.15■■□□□ 1.46
SEC61A2-201ENST00000298428 MYH16Q9H6N6 1097 aa24.15■■□□□ 1.46
SEC61A2-201ENST00000298428 IL16Q14005 1332 aa24.15■■□□□ 1.46
SEC61A2-201ENST00000298428 CHRNA2Q15822 529 aa24.14■■□□□ 1.45
SEC61A2-201ENST00000298428 RNF123Q5XPI4 1314 aa24.13■■□□□ 1.45
SEC61A2-201ENST00000298428 CAMTA1Q9Y6Y1 1673 aa24.12■■□□□ 1.45
SEC61A2-201ENST00000298428 NCAPD2Q15021 1401 aa24.12■■□□□ 1.45
SEC61A2-201ENST00000298428 PIP4K2BP78356 416 aa24.11■■□□□ 1.45
SEC61A2-201ENST00000298428 MTHFSDQ2M296 383 aaKnown RBP24.11■■□□□ 1.45
SEC61A2-201ENST00000298428 PRDM11Q9NQV5 511 aa24.11■■□□□ 1.45
SEC61A2-201ENST00000298428 CALD1Q05682 793 aaKnown RBP24.11■■□□□ 1.45
SEC61A2-201ENST00000298428 GAS2L2Q8NHY3 880 aa24.11■■□□□ 1.45
SEC61A2-201ENST00000298428 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
SEC61A2-201ENST00000298428 UBAP1LF5GYI3 381 aa24.09■■□□□ 1.45
SEC61A2-201ENST00000298428 THUMPD2Q9BTF0 503 aaKnown RBP24.09■■□□□ 1.45
SEC61A2-201ENST00000298428 FAM83GA6ND36 823 aa24.09■■□□□ 1.45
SEC61A2-201ENST00000298428 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.45
SEC61A2-201ENST00000298428 LMO7Q8WWI1 1683 aa24.08■■□□□ 1.45
SEC61A2-201ENST00000298428 IRX6P78412 446 aaPredicted RBP24.08■■□□□ 1.45
SEC61A2-201ENST00000298428 COL16A1Q07092 1604 aaPredicted RBP24.07■■□□□ 1.44
SEC61A2-201ENST00000298428 COL22A1Q8NFW1 1626 aaPredicted RBP24.07■■□□□ 1.44
SEC61A2-201ENST00000298428 CSB-PGBD3P0DP91 1061 aa24.07■■□□□ 1.44
SEC61A2-201ENST00000298428 TSR2Q969E8 191 aaKnown RBP24.07■■□□□ 1.44
SEC61A2-201ENST00000298428 FAM208AQ9UK61 1670 aaKnown RBP24.06■■□□□ 1.44
SEC61A2-201ENST00000298428 RRP1P56182 461 aaKnown RBP24.06■■□□□ 1.44
SEC61A2-201ENST00000298428 DCTN1Q14203 1278 aa24.06■■□□□ 1.44
SEC61A2-201ENST00000298428 NLRP2Q9NX02 1062 aa24.05■■□□□ 1.44
SEC61A2-201ENST00000298428 IFT57Q9NWB7 429 aa24.04■■□□□ 1.44
SEC61A2-201ENST00000298428 MCM10Q7L590 875 aa24.03■■□□□ 1.44
SEC61A2-201ENST00000298428 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
SEC61A2-201ENST00000298428 LAS1LQ9Y4W2 734 aaKnown RBP24.03■■□□□ 1.44
SEC61A2-201ENST00000298428 GNAI1P63096 354 aa24.02■■□□□ 1.44
SEC61A2-201ENST00000298428 CERKQ8TCT0 537 aa24.02■■□□□ 1.44
SEC61A2-201ENST00000298428 COL5A2P05997 1499 aaPredicted RBP24.01■■□□□ 1.43
SEC61A2-201ENST00000298428 MAP3K5Q99683 1374 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms