RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 VAMP4O75379 141 aa12.68□□□□□ -0.38
CCDC36-201ENST00000296449 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
CCDC36-201ENST00000296449 SENP3Q9H4L4 574 aaPredicted RBP12.68□□□□□ -0.38
CCDC36-201ENST00000296449 ZFYVE9O95405 1425 aa12.68□□□□□ -0.38
CCDC36-201ENST00000296449 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
CCDC36-201ENST00000296449 TRIM44Q96DX7 344 aaPredicted RBP12.68□□□□□ -0.38
CCDC36-201ENST00000296449 SSFA2P28290 1259 aa12.67□□□□□ -0.38
CCDC36-201ENST00000296449 IDI1Q13907 227 aa12.67□□□□□ -0.38
CCDC36-201ENST00000296449 CLEC17AQ6ZS10 378 aa12.67□□□□□ -0.38
CCDC36-201ENST00000296449 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
CCDC36-201ENST00000296449 PRAM1Q96QH2 718 aa12.67□□□□□ -0.38
CCDC36-201ENST00000296449 THUMPD2Q9BTF0 503 aaKnown RBP12.66□□□□□ -0.38
CCDC36-201ENST00000296449 ABCC4O15439 1325 aa12.66□□□□□ -0.38
CCDC36-201ENST00000296449 HDGFL2Q7Z4V5 671 aaPredicted RBP12.66□□□□□ -0.38
CCDC36-201ENST00000296449 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
CCDC36-201ENST00000296449 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
CCDC36-201ENST00000296449 ARHGAP31Q2M1Z3 1444 aa12.66□□□□□ -0.38
CCDC36-201ENST00000296449 CDC45O75419 566 aa12.65□□□□□ -0.38
CCDC36-201ENST00000296449 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
CCDC36-201ENST00000296449 AEBP2Q6ZN18 517 aaPredicted RBP12.65□□□□□ -0.38
CCDC36-201ENST00000296449 FBLN1P23142 703 aa12.65□□□□□ -0.38
CCDC36-201ENST00000296449 RRP9O43818 475 aaKnown RBP12.64□□□□□ -0.39
CCDC36-201ENST00000296449 POLKQ9UBT6 870 aa12.64□□□□□ -0.39
CCDC36-201ENST00000296449 KIF20BQ96Q89 1820 aa12.64□□□□□ -0.39
CCDC36-201ENST00000296449 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
CCDC36-201ENST00000296449 GLIPR1L2Q4G1C9 344 aa12.64□□□□□ -0.39
CCDC36-201ENST00000296449 PKNOX2Q96KN3 472 aa12.64□□□□□ -0.39
CCDC36-201ENST00000296449 CABP1Q9NZU7 370 aa12.64□□□□□ -0.39
CCDC36-201ENST00000296449 YTHDC2Q9H6S0 1430 aaKnown RBP12.64□□□□□ -0.39
CCDC36-201ENST00000296449 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
CCDC36-201ENST00000296449 ELL2O00472 640 aaPredicted RBP12.63□□□□□ -0.39
CCDC36-201ENST00000296449 BAG4O95429 457 aaKnown RBP12.63□□□□□ -0.39
CCDC36-201ENST00000296449 HMOX1P09601 288 aa12.63□□□□□ -0.39
CCDC36-201ENST00000296449 CALD1Q05682 793 aaKnown RBP12.63□□□□□ -0.39
CCDC36-201ENST00000296449 KLHL40Q2TBA0 621 aa12.63□□□□□ -0.39
CCDC36-201ENST00000296449 CDK19Q9BWU1 502 aa12.63□□□□□ -0.39
CCDC36-201ENST00000296449 IFT57Q9NWB7 429 aa12.63□□□□□ -0.39
CCDC36-201ENST00000296449 ZNF853P0CG23 659 aa12.63□□□□□ -0.39
CCDC36-201ENST00000296449 GNAI1P63096 354 aa12.63□□□□□ -0.39
CCDC36-201ENST00000296449 HSP90AA2PQ14568 343 aaPredicted RBP12.63□□□□□ -0.39
CCDC36-201ENST00000296449 PPP1R9BQ96SB3 815 aa12.63□□□□□ -0.39
CCDC36-201ENST00000296449 MBIPQ9NS73 344 aa12.63□□□□□ -0.39
CCDC36-201ENST00000296449 CCDC173Q0VFZ6 552 aa12.62□□□□□ -0.39
CCDC36-201ENST00000296449 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
CCDC36-201ENST00000296449 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
CCDC36-201ENST00000296449 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
CCDC36-201ENST00000296449 PLEKHM2Q8IWE5 1019 aa12.62□□□□□ -0.39
CCDC36-201ENST00000296449 SLC52A1Q9NWF4 448 aa12.62□□□□□ -0.39
CCDC36-201ENST00000296449 DDX49Q9Y6V7 483 aaKnown RBP12.62□□□□□ -0.39
CCDC36-201ENST00000296449 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC36-201ENST00000296449 RABEP1Q15276 862 aa12.61□□□□□ -0.39
CCDC36-201ENST00000296449 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
CCDC36-201ENST00000296449 MYO5BQ9ULV0 1848 aa12.61□□□□□ -0.39
CCDC36-201ENST00000296449 C8orf58Q8NAV2 365 aa12.6□□□□□ -0.39
CCDC36-201ENST00000296449 API5Q9BZZ5 524 aaKnown RBP12.6□□□□□ -0.39
CCDC36-201ENST00000296449 KNDC1Q76NI1 1749 aa12.6□□□□□ -0.39
CCDC36-201ENST00000296449 KIF24Q5T7B8 1368 aa12.6□□□□□ -0.39
CCDC36-201ENST00000296449 TTC22Q5TAA0 569 aa12.59□□□□□ -0.39
CCDC36-201ENST00000296449 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
CCDC36-201ENST00000296449 TMEM131LA2VDJ0 1609 aa12.59□□□□□ -0.39
CCDC36-201ENST00000296449 YEATS2Q9ULM3 1422 aa12.59□□□□□ -0.39
CCDC36-201ENST00000296449 RAPGEF3O95398 923 aa12.59□□□□□ -0.39
CCDC36-201ENST00000296449 CYP2E1P05181 493 aaPredicted RBP12.59□□□□□ -0.39
CCDC36-201ENST00000296449 TPM2P07951 284 aa12.59□□□□□ -0.39
CCDC36-201ENST00000296449 USP26Q9BXU7 913 aa12.59□□□□□ -0.39
CCDC36-201ENST00000296449 IL13P35225 146 aa12.58□□□□□ -0.39
CCDC36-201ENST00000296449 ZSCAN30Q86W11 494 aa12.58□□□□□ -0.39
CCDC36-201ENST00000296449 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.39
CCDC36-201ENST00000296449 AK9Q5TCS8 1911 aa12.58□□□□□ -0.4
CCDC36-201ENST00000296449 ZNF445P59923 1031 aa12.58□□□□□ -0.4
CCDC36-201ENST00000296449 NUCB2P80303 420 aa12.58□□□□□ -0.4
CCDC36-201ENST00000296449 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
CCDC36-201ENST00000296449 C16orf71Q8IYS4 520 aaPredicted RBP12.58□□□□□ -0.4
CCDC36-201ENST00000296449 DIP2CQ9Y2E4 1556 aa12.58□□□□□ -0.4
CCDC36-201ENST00000296449 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
CCDC36-201ENST00000296449 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
CCDC36-201ENST00000296449 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
CCDC36-201ENST00000296449 ATP7BP35670 1465 aa12.57□□□□□ -0.4
CCDC36-201ENST00000296449 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC36-201ENST00000296449 PKP1Q13835 747 aa12.57□□□□□ -0.4
CCDC36-201ENST00000296449 ALKQ9UM73 1620 aa12.56□□□□□ -0.4
CCDC36-201ENST00000296449 CAVIN1Q6NZI2 390 aaKnown RBP12.56□□□□□ -0.4
CCDC36-201ENST00000296449 OTUD7AQ8TE49 926 aaPredicted RBP12.56□□□□□ -0.4
CCDC36-201ENST00000296449 FAM83GA6ND36 823 aa12.56□□□□□ -0.4
CCDC36-201ENST00000296449 LMOD3Q0VAK6 560 aa12.56□□□□□ -0.4
CCDC36-201ENST00000296449 ZSCAN23Q3MJ62 389 aa12.56□□□□□ -0.4
CCDC36-201ENST00000296449 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
CCDC36-201ENST00000296449 ATP10DQ9P241 1426 aa12.56□□□□□ -0.4
CCDC36-201ENST00000296449 RIMS2Q9UQ26 1411 aa12.56□□□□□ -0.4
CCDC36-201ENST00000296449 KIAA1211Q6ZU35 1233 aa12.55□□□□□ -0.4
CCDC36-201ENST00000296449 ANKRD44Q8N8A2 993 aa12.55□□□□□ -0.4
CCDC36-201ENST00000296449 CDK12Q9NYV4 1490 aaPredicted RBP12.55□□□□□ -0.4
CCDC36-201ENST00000296449 HS1BP3Q53T59 392 aa12.55□□□□□ -0.4
CCDC36-201ENST00000296449 PREX1Q8TCU6 1659 aa12.54□□□□□ -0.4
CCDC36-201ENST00000296449 DLG5Q8TDM6 1919 aa12.54□□□□□ -0.4
CCDC36-201ENST00000296449 NCLP19338 710 aaKnown RBP12.54□□□□□ -0.4
CCDC36-201ENST00000296449 SDSP20132 328 aa12.54□□□□□ -0.4
CCDC36-201ENST00000296449 CYB5RLQ6IPT4 315 aa12.54□□□□□ -0.4
CCDC36-201ENST00000296449 CWC22Q9HCG8 908 aaKnown RBP12.54□□□□□ -0.4
CCDC36-201ENST00000296449 OFD1O75665 1012 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms