RNA–Protein interactions for RNA: ENST00000296029.3

PF4-201, Transcript of platelet factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4-201ENST00000296029 A0A1W2PP64 1363 aa24.05■■□□□ 1.44
PF4-201ENST00000296029 BAG6P46379 1132 aa24.05■■□□□ 1.44
PF4-201ENST00000296029 FAM196AQ6ZSG2 479 aa24.05■■□□□ 1.44
PF4-201ENST00000296029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.05■■□□□ 1.44
PF4-201ENST00000296029 CLSPNQ9HAW4 1339 aa24.05■■□□□ 1.44
PF4-201ENST00000296029 NINLQ9Y2I6 1382 aa24.04■■□□□ 1.44
PF4-201ENST00000296029 NME9Q86XW9 330 aa24.04■■□□□ 1.44
PF4-201ENST00000296029 TERF2IPQ9NYB0 399 aa24.04■■□□□ 1.44
PF4-201ENST00000296029 TIMELESSQ9UNS1 1208 aa24.04■■□□□ 1.44
PF4-201ENST00000296029 WDR17Q8IZU2 1322 aa24.04■■□□□ 1.44
PF4-201ENST00000296029 PDE3BQ13370 1112 aa24.02■■□□□ 1.44
PF4-201ENST00000296029 USP47Q96K76 1375 aa24.02■■□□□ 1.44
PF4-201ENST00000296029 SOX12O15370 315 aa24.01■■□□□ 1.43
PF4-201ENST00000296029 RGPD5Q99666 1765 aa24.01■■□□□ 1.43
PF4-201ENST00000296029 TOM1L2Q6ZVM7 507 aa24■■□□□ 1.43
PF4-201ENST00000296029 OVOS2A0A0J9YW53 1432 aa23.99■■□□□ 1.43
PF4-201ENST00000296029 OVOS2Q6IE36 1432 aa23.99■■□□□ 1.43
PF4-201ENST00000296029 TRIM37O94972 964 aa23.98■■□□□ 1.43
PF4-201ENST00000296029 EN1Q05925 392 aaPredicted RBP23.98■■□□□ 1.43
PF4-201ENST00000296029 LRRC37A3O60309 1634 aa23.98■■□□□ 1.43
PF4-201ENST00000296029 WNK3Q9BYP7 1800 aa23.98■■□□□ 1.43
PF4-201ENST00000296029 CARD10Q9BWT7 1032 aa23.97■■□□□ 1.43
PF4-201ENST00000296029 PCGF6Q9BYE7 350 aa23.96■■□□□ 1.43
PF4-201ENST00000296029 PEAK1Q9H792 1746 aa23.96■■□□□ 1.43
PF4-201ENST00000296029 TMF1P82094 1093 aa23.94■■□□□ 1.42
PF4-201ENST00000296029 CDCA7Q9BWT1 371 aaPredicted RBP23.94■■□□□ 1.42
PF4-201ENST00000296029 LTN1O94822 1766 aa23.93■■□□□ 1.42
PF4-201ENST00000296029 ANKRD36BQ8N2N9 1353 aa23.93■■□□□ 1.42
PF4-201ENST00000296029 C11orf95C9JLR9 678 aaPredicted RBP23.93■■□□□ 1.42
PF4-201ENST00000296029 CAMKK2Q96RR4 588 aa23.93■■□□□ 1.42
PF4-201ENST00000296029 OVOS2A0A0G2JMS6 1433 aa23.93■■□□□ 1.42
PF4-201ENST00000296029 DDB1Q16531 1140 aa23.92■■□□□ 1.42
PF4-201ENST00000296029 PARD3Q8TEW0 1356 aa23.91■■□□□ 1.42
PF4-201ENST00000296029 ERBB3P21860 1342 aa23.91■■□□□ 1.42
PF4-201ENST00000296029 CSB-PGBD3P0DP91 1061 aa23.91■■□□□ 1.42
PF4-201ENST00000296029 EZH2Q15910 746 aaKnown RBP23.91■■□□□ 1.42
PF4-201ENST00000296029 CCDC7Q96M83 1385 aa23.91■■□□□ 1.42
PF4-201ENST00000296029 APBA3O96018 575 aa23.9■■□□□ 1.42
PF4-201ENST00000296029 BCL9O00512 1426 aa23.88■■□□□ 1.41
PF4-201ENST00000296029 MARCH10Q8NA82 808 aaPredicted RBP23.87■■□□□ 1.41
PF4-201ENST00000296029 RREB1Q92766 1687 aa23.86■■□□□ 1.41
PF4-201ENST00000296029 CDCA8Q53HL2 280 aa23.86■■□□□ 1.41
PF4-201ENST00000296029 SBF2Q86WG5 1849 aa23.86■■□□□ 1.41
PF4-201ENST00000296029 COG3Q96JB2 828 aa23.85■■□□□ 1.41
PF4-201ENST00000296029 PSDA5PKW4 1024 aaPredicted RBP23.84■■□□□ 1.41
PF4-201ENST00000296029 ANKRD24Q8TF21 1146 aa23.84■■□□□ 1.41
PF4-201ENST00000296029 IP6K1Q92551 441 aa23.84■■□□□ 1.41
PF4-201ENST00000296029 TNS2Q63HR2 1409 aa23.83■■□□□ 1.4
PF4-201ENST00000296029 LRP5O75197 1615 aa23.82■■□□□ 1.4
PF4-201ENST00000296029 NLRP2Q9NX02 1062 aa23.82■■□□□ 1.4
PF4-201ENST00000296029 NUP188Q5SRE5 1749 aa23.81■■□□□ 1.4
PF4-201ENST00000296029 MYOM1P52179 1685 aa23.81■■□□□ 1.4
PF4-201ENST00000296029 EXOC5O00471 708 aa23.81■■□□□ 1.4
PF4-201ENST00000296029 FYB1O15117 783 aa23.81■■□□□ 1.4
PF4-201ENST00000296029 MAP3K19Q56UN5 1328 aa23.81■■□□□ 1.4
PF4-201ENST00000296029 RGPD3A6NKT7 1758 aaPredicted RBP23.8■■□□□ 1.4
PF4-201ENST00000296029 RGPD4Q7Z3J3 1758 aa23.8■■□□□ 1.4
PF4-201ENST00000296029 R3HDM1Q15032 1099 aaKnown RBP23.8■■□□□ 1.4
PF4-201ENST00000296029 BCL11BQ9C0K0 894 aaPredicted RBP23.8■■□□□ 1.4
PF4-201ENST00000296029 PLSCR1O15162 318 aa23.78■■□□□ 1.4
PF4-201ENST00000296029 PTF1AQ7RTS3 328 aa23.78■■□□□ 1.4
PF4-201ENST00000296029 FAM208AQ9UK61 1670 aaKnown RBP23.78■■□□□ 1.4
PF4-201ENST00000296029 IL2RBP14784 551 aa23.77■■□□□ 1.4
PF4-201ENST00000296029 FBLN1P23142 703 aa23.77■■□□□ 1.4
PF4-201ENST00000296029 HOXC9P31274 260 aa23.77■■□□□ 1.4
PF4-201ENST00000296029 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
PF4-201ENST00000296029 GGNBP2Q9H3C7 697 aa23.76■■□□□ 1.39
PF4-201ENST00000296029 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
PF4-201ENST00000296029 CARD14Q9BXL6 1004 aa23.75■■□□□ 1.39
PF4-201ENST00000296029 KIF20BQ96Q89 1820 aa23.75■■□□□ 1.39
PF4-201ENST00000296029 AMPHP49418 695 aa23.73■■□□□ 1.39
PF4-201ENST00000296029 NSD3Q9BZ95 1437 aa23.71■■□□□ 1.39
PF4-201ENST00000296029 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
PF4-201ENST00000296029 LTV1Q96GA3 475 aaPredicted RBP23.71■■□□□ 1.39
PF4-201ENST00000296029 NBPF14Q5TI25 921 aa23.7■■□□□ 1.38
PF4-201ENST00000296029 NHSQ6T4R5 1651 aa23.7■■□□□ 1.38
PF4-201ENST00000296029 PROM2Q8N271 834 aa23.69■■□□□ 1.38
PF4-201ENST00000296029 EIF4G2P78344 907 aaKnown RBP eCLIP23.68■■□□□ 1.38
PF4-201ENST00000296029 KIF24Q5T7B8 1368 aa23.67■■□□□ 1.38
PF4-201ENST00000296029 KCNQ2O43526 872 aa23.67■■□□□ 1.38
PF4-201ENST00000296029 RGPD2P0DJD1 1756 aa23.66■■□□□ 1.38
PF4-201ENST00000296029 HSPA5P11021 654 aaKnown RBP23.66■■□□□ 1.38
PF4-201ENST00000296029 INSRP06213 1382 aa23.65■■□□□ 1.38
PF4-201ENST00000296029 FLT4P35916 1363 aa23.64■■□□□ 1.37
PF4-201ENST00000296029 NBPF6Q5VWK0 638 aa23.63■■□□□ 1.37
PF4-201ENST00000296029 ACSBG1Q96GR2 724 aa23.63■■□□□ 1.37
PF4-201ENST00000296029 NBPF4Q96M43 638 aa23.63■■□□□ 1.37
PF4-201ENST00000296029 ANO8Q9HCE9 1232 aaPredicted RBP23.63■■□□□ 1.37
PF4-201ENST00000296029 MEGF6O75095 1541 aa23.63■■□□□ 1.37
PF4-201ENST00000296029 TXNRD1Q16881 649 aa23.62■■□□□ 1.37
PF4-201ENST00000296029 HSP90AB2PQ58FF8 381 aa23.62■■□□□ 1.37
PF4-201ENST00000296029 CGNL1Q0VF96 1302 aa23.61■■□□□ 1.37
PF4-201ENST00000296029 SMG6Q86US8 1419 aaKnown RBP23.61■■□□□ 1.37
PF4-201ENST00000296029 SHANK3Q9BYB0 1731 aa23.61■■□□□ 1.37
PF4-201ENST00000296029 ANKRD26Q9UPS8 1709 aa23.6■■□□□ 1.37
PF4-201ENST00000296029 BTAF1O14981 1849 aa23.59■■□□□ 1.37
PF4-201ENST00000296029 DDX54Q8TDD1 881 aaKnown RBP23.59■■□□□ 1.37
PF4-201ENST00000296029 EMILIN1Q9Y6C2 1016 aa23.59■■□□□ 1.37
PF4-201ENST00000296029 ZCRB1Q8TBF4 217 aaKnown RBP23.58■■□□□ 1.37
PF4-201ENST00000296029 POLR3GLQ9BT43 218 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms