RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 DDX19BQ9UMR2 479 aa7.83□□□□□ -1.16
VCAM1-201ENST00000294728 COL22A1Q8NFW1 1626 aaPredicted RBP7.83□□□□□ -1.16
VCAM1-201ENST00000294728 BRINP3Q76B58 766 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 SNX21Q969T3 373 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 PCDHB15Q9Y5E8 787 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 AFF2P51816 1311 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 PTMSP20962 102 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 COG6Q9Y2V7 657 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 MON2Q7Z3U7 1717 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 PTCH1Q13635 1447 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 FSD2A1L4K1 749 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 FRAT2O75474 233 aaPredicted RBP7.82□□□□□ -1.16
VCAM1-201ENST00000294728 RBM25P49756 843 aaKnown RBP7.82□□□□□ -1.16
VCAM1-201ENST00000294728 RGS3P49796 1198 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 MTHFSP49914 203 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 SKAP1Q86WV1 359 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 PANK1Q8TE04 598 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 ARHGAP45Q92619 1136 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 PDZRN3Q9UPQ7 1066 aa7.82□□□□□ -1.16
VCAM1-201ENST00000294728 DDIT3P35638 169 aa7.81□□□□□ -1.16
VCAM1-201ENST00000294728 DZIP1LQ8IYY4 767 aaKnown RBP7.81□□□□□ -1.16
VCAM1-201ENST00000294728 IL27Q8NEV9 243 aa7.81□□□□□ -1.16
VCAM1-201ENST00000294728 CIZ1Q9ULV3 898 aaPredicted RBP7.81□□□□□ -1.16
VCAM1-201ENST00000294728 NRKQ7Z2Y5 1582 aa7.81□□□□□ -1.16
VCAM1-201ENST00000294728 AKAP12Q02952 1782 aa7.81□□□□□ -1.16
VCAM1-201ENST00000294728 NALCNQ8IZF0 1738 aa7.81□□□□□ -1.16
VCAM1-201ENST00000294728 CANXP27824 592 aaKnown RBP7.81□□□□□ -1.16
VCAM1-201ENST00000294728 CFAP44Q96MT7 982 aa7.81□□□□□ -1.16
VCAM1-201ENST00000294728 A0A1W2PP64 1363 aa7.8□□□□□ -1.16
VCAM1-201ENST00000294728 RLBP1P12271 317 aa7.8□□□□□ -1.16
VCAM1-201ENST00000294728 ATF3P18847 181 aa7.8□□□□□ -1.16
VCAM1-201ENST00000294728 RBM6P78332 1123 aaKnown RBP7.8□□□□□ -1.16
VCAM1-201ENST00000294728 SLC12A5Q9H2X9 1139 aa7.8□□□□□ -1.16
VCAM1-201ENST00000294728 IPO8O15397 1037 aaKnown RBP7.8□□□□□ -1.16
VCAM1-201ENST00000294728 RSPH6AQ9H0K4 717 aa7.8□□□□□ -1.16
VCAM1-201ENST00000294728 YTHDC2Q9H6S0 1430 aaKnown RBP7.8□□□□□ -1.16
VCAM1-201ENST00000294728 SEC24BO95487 1268 aa7.8□□□□□ -1.16
VCAM1-201ENST00000294728 TBC1D2Q9BYX2 928 aa7.8□□□□□ -1.16
VCAM1-201ENST00000294728 TMPOP42166 694 aaKnown RBP7.79□□□□□ -1.16
VCAM1-201ENST00000294728 ATF7IPQ6VMQ6 1270 aa7.79□□□□□ -1.16
VCAM1-201ENST00000294728 CHMP5Q9NZZ3 219 aa7.79□□□□□ -1.16
VCAM1-201ENST00000294728 TRIM35Q9UPQ4 493 aa7.79□□□□□ -1.16
VCAM1-201ENST00000294728 ADGRL3Q9HAR2 1447 aa7.79□□□□□ -1.16
VCAM1-201ENST00000294728 MARF1Q9Y4F3 1742 aaKnown RBP7.79□□□□□ -1.16
VCAM1-201ENST00000294728 ATRNO75882 1429 aa7.79□□□□□ -1.16
VCAM1-201ENST00000294728 CLEC17AQ6ZS10 378 aa7.79□□□□□ -1.16
VCAM1-201ENST00000294728 ZBTB40Q9NUA8 1239 aa7.79□□□□□ -1.16
VCAM1-201ENST00000294728 AATKQ6ZMQ8 1374 aa7.79□□□□□ -1.16
VCAM1-201ENST00000294728 LRP5O75197 1615 aa7.79□□□□□ -1.16
VCAM1-201ENST00000294728 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.78□□□□□ -1.16
VCAM1-201ENST00000294728 MAP2P11137 1827 aaKnown RBP7.78□□□□□ -1.16
VCAM1-201ENST00000294728 FCHSD2O94868 740 aa7.78□□□□□ -1.16
VCAM1-201ENST00000294728 CALD1Q05682 793 aaKnown RBP7.78□□□□□ -1.16
VCAM1-201ENST00000294728 LRRC59Q96AG4 307 aaKnown RBP7.78□□□□□ -1.16
VCAM1-201ENST00000294728 TERF2IPQ9NYB0 399 aa7.78□□□□□ -1.16
VCAM1-201ENST00000294728 DLG5Q8TDM6 1919 aa7.78□□□□□ -1.16
VCAM1-201ENST00000294728 N4BP2Q86UW6 1770 aaPredicted RBP7.78□□□□□ -1.16
VCAM1-201ENST00000294728 PRKCSHP14314 528 aaPredicted RBP7.77□□□□□ -1.16
VCAM1-201ENST00000294728 SLC4A3P48751 1232 aa7.77□□□□□ -1.16
VCAM1-201ENST00000294728 NUCB1Q02818 461 aa7.77□□□□□ -1.16
VCAM1-201ENST00000294728 CPSF1Q10570 1443 aaKnown RBP7.77□□□□□ -1.17
VCAM1-201ENST00000294728 IBTKQ9P2D0 1353 aaPredicted RBP7.77□□□□□ -1.17
VCAM1-201ENST00000294728 DDX11L8A8MPP1 907 aa7.77□□□□□ -1.17
VCAM1-201ENST00000294728 GCC1Q96CN9 775 aa7.77□□□□□ -1.17
VCAM1-201ENST00000294728 ZNF692Q9BU19 519 aaPredicted RBP7.77□□□□□ -1.17
VCAM1-201ENST00000294728 TRAK1Q9UPV9 953 aa7.77□□□□□ -1.17
VCAM1-201ENST00000294728 AMOTL2Q9Y2J4 779 aa7.77□□□□□ -1.17
VCAM1-201ENST00000294728 TRIM27P14373 513 aa7.77□□□□□ -1.17
VCAM1-201ENST00000294728 MCM4P33991 863 aa7.77□□□□□ -1.17
VCAM1-201ENST00000294728 BMP2KLQ5H9B9 411 aa7.77□□□□□ -1.17
VCAM1-201ENST00000294728 SIRT1Q96EB6 747 aa7.77□□□□□ -1.17
VCAM1-201ENST00000294728 C22orf23Q9BZE7 217 aa7.77□□□□□ -1.17
VCAM1-201ENST00000294728 QTRT2Q9H974 415 aaKnown RBP7.77□□□□□ -1.17
VCAM1-201ENST00000294728 C14orf37Q86TY3 774 aa7.76□□□□□ -1.17
VCAM1-201ENST00000294728 BRPF3Q9ULD4 1205 aa7.76□□□□□ -1.17
VCAM1-201ENST00000294728 TECPR2O15040 1411 aa7.76□□□□□ -1.17
VCAM1-201ENST00000294728 ITSN1Q15811 1721 aa7.76□□□□□ -1.17
VCAM1-201ENST00000294728 NUTM2BA6NNL0 878 aaPredicted RBP7.76□□□□□ -1.17
VCAM1-201ENST00000294728 NUTM2EB1AL46 878 aaPredicted RBP7.76□□□□□ -1.17
VCAM1-201ENST00000294728 NUTM2AQ8IVF1 878 aaPredicted RBP7.76□□□□□ -1.17
VCAM1-201ENST00000294728 FTSJ3Q8IY81 847 aaKnown RBP7.76□□□□□ -1.17
VCAM1-201ENST00000294728 C1orf167Q5SNV9 1468 aa7.76□□□□□ -1.17
VCAM1-201ENST00000294728 RGPD1P0DJD0 1748 aa7.75□□□□□ -1.17
VCAM1-201ENST00000294728 CCDC125Q86Z20 511 aa7.75□□□□□ -1.17
VCAM1-201ENST00000294728 TOPAZ1Q8N9V7 1692 aa7.75□□□□□ -1.17
VCAM1-201ENST00000294728 EDC4Q6P2E9 1401 aaKnown RBP7.75□□□□□ -1.17
VCAM1-201ENST00000294728 SKOR2Q2VWA4 1001 aaPredicted RBP7.75□□□□□ -1.17
VCAM1-201ENST00000294728 NGLY1Q96IV0 654 aa7.75□□□□□ -1.17
VCAM1-201ENST00000294728 FYB1O15117 783 aa7.75□□□□□ -1.17
VCAM1-201ENST00000294728 U2AF1L5P0DN76 240 aaPredicted RBP7.75□□□□□ -1.17
VCAM1-201ENST00000294728 U2AF1Q01081 240 aaKnown RBP eCLIP7.75□□□□□ -1.17
VCAM1-201ENST00000294728 FNBP4Q8N3X1 1017 aaPredicted RBP7.75□□□□□ -1.17
VCAM1-201ENST00000294728 SSH1Q8WYL5 1049 aa7.75□□□□□ -1.17
VCAM1-201ENST00000294728 SOS2Q07890 1332 aaPredicted RBP7.74□□□□□ -1.17
VCAM1-201ENST00000294728 TUBGCP6Q96RT7 1819 aa7.74□□□□□ -1.17
VCAM1-201ENST00000294728 ZNF853P0CG23 659 aa7.74□□□□□ -1.17
VCAM1-201ENST00000294728 ABCC4O15439 1325 aa7.74□□□□□ -1.17
VCAM1-201ENST00000294728 MRE11P49959 708 aa7.74□□□□□ -1.17
VCAM1-201ENST00000294728 SMC4Q9NTJ3 1288 aa7.74□□□□□ -1.17
VCAM1-201ENST00000294728 USP54Q70EL1 1684 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms