RNA–Protein interactions for RNA: ENST00000286758.4

CXCL13-201, Transcript of C-X-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL13, Length 1,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-201ENST00000286758 CTIFO43310 598 aaKnown RBP13.27□□□□□ -0.29
CXCL13-201ENST00000286758 NRDCO43847 1150 aa13.27□□□□□ -0.29
CXCL13-201ENST00000286758 DHX16O60231 1041 aaKnown RBP13.27□□□□□ -0.29
CXCL13-201ENST00000286758 CERS3Q8IU89 383 aa13.27□□□□□ -0.29
CXCL13-201ENST00000286758 PIBF1Q8WXW3 757 aa13.27□□□□□ -0.29
CXCL13-201ENST00000286758 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
CXCL13-201ENST00000286758 TBC1D2Q9BYX2 928 aa13.27□□□□□ -0.29
CXCL13-201ENST00000286758 DDX41Q9UJV9 622 aaKnown RBP13.27□□□□□ -0.29
CXCL13-201ENST00000286758 CCDC18Q5T9S5 1454 aa13.27□□□□□ -0.29
CXCL13-201ENST00000286758 KDM5BQ9UGL1 1544 aa13.27□□□□□ -0.29
CXCL13-201ENST00000286758 PPP1R12AO14974 1030 aaPredicted RBP13.26□□□□□ -0.29
CXCL13-201ENST00000286758 CASQ1P31415 396 aa13.26□□□□□ -0.29
CXCL13-201ENST00000286758 RABEP1Q15276 862 aa13.26□□□□□ -0.29
CXCL13-201ENST00000286758 UACAQ9BZF9 1416 aa13.26□□□□□ -0.29
CXCL13-201ENST00000286758 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
CXCL13-201ENST00000286758 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
CXCL13-201ENST00000286758 MIA2Q96PC5 1412 aa13.25□□□□□ -0.29
CXCL13-201ENST00000286758 RIOK3O14730 519 aaKnown RBP13.25□□□□□ -0.29
CXCL13-201ENST00000286758 CCDC184Q52MB2 194 aa13.25□□□□□ -0.29
CXCL13-201ENST00000286758 CT47A1Q5JQC4 288 aaPredicted RBP13.25□□□□□ -0.29
CXCL13-201ENST00000286758 SWT1Q5T5J6 900 aaKnown RBP13.25□□□□□ -0.29
CXCL13-201ENST00000286758 TMEM92Q6UXU6 159 aa13.25□□□□□ -0.29
CXCL13-201ENST00000286758 TXLNBQ8N3L3 684 aa13.25□□□□□ -0.29
CXCL13-201ENST00000286758 PAIP2Q9BPZ3 127 aaKnown RBP13.25□□□□□ -0.29
CXCL13-201ENST00000286758 DEF6Q9H4E7 631 aa13.25□□□□□ -0.29
CXCL13-201ENST00000286758 GAS2L3Q86XJ1 694 aa13.24□□□□□ -0.29
CXCL13-201ENST00000286758 HSCBQ8IWL3 235 aa13.24□□□□□ -0.29
CXCL13-201ENST00000286758 PANK3Q9H999 370 aa13.24□□□□□ -0.29
CXCL13-201ENST00000286758 SPTLC3Q9NUV7 552 aa13.24□□□□□ -0.29
CXCL13-201ENST00000286758 RSPH14Q9UHP6 348 aa13.24□□□□□ -0.29
CXCL13-201ENST00000286758 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
CXCL13-201ENST00000286758 CCDC196A0A1B0GTZ2 297 aa13.23□□□□□ -0.29
CXCL13-201ENST00000286758 PTGER2P43116 358 aa13.23□□□□□ -0.29
CXCL13-201ENST00000286758 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
CXCL13-201ENST00000286758 SETDB1Q15047 1291 aa13.23□□□□□ -0.29
CXCL13-201ENST00000286758 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
CXCL13-201ENST00000286758 P3H3Q8IVL6 736 aa13.23□□□□□ -0.29
CXCL13-201ENST00000286758 ITFG2Q969R8 447 aa13.23□□□□□ -0.29
CXCL13-201ENST00000286758 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
CXCL13-201ENST00000286758 MED1Q15648 1581 aaPredicted RBP13.23□□□□□ -0.29
CXCL13-201ENST00000286758 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
CXCL13-201ENST00000286758 RNF20Q5VTR2 975 aa13.22□□□□□ -0.29
CXCL13-201ENST00000286758 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
CXCL13-201ENST00000286758 KANK1Q14678 1352 aa13.21□□□□□ -0.29
CXCL13-201ENST00000286758 A0A1B0GUL7 405 aa13.21□□□□□ -0.29
CXCL13-201ENST00000286758 SNX21Q969T3 373 aa13.21□□□□□ -0.29
CXCL13-201ENST00000286758 CRBNQ96SW2 442 aa13.21□□□□□ -0.29
CXCL13-201ENST00000286758 CTNNA3Q9UI47 895 aa13.21□□□□□ -0.29
CXCL13-201ENST00000286758 CYP2C19P33261 490 aa13.2□□□□□ -0.3
CXCL13-201ENST00000286758 DDIT3P35638 169 aa13.2□□□□□ -0.3
CXCL13-201ENST00000286758 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
CXCL13-201ENST00000286758 SEMA3FQ13275 785 aa13.2□□□□□ -0.3
CXCL13-201ENST00000286758 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
CXCL13-201ENST00000286758 CAVIN1Q6NZI2 390 aaKnown RBP13.2□□□□□ -0.3
CXCL13-201ENST00000286758 SUGP1Q8IWZ8 645 aaKnown RBP13.2□□□□□ -0.3
CXCL13-201ENST00000286758 SMC5Q8IY18 1101 aa13.2□□□□□ -0.3
CXCL13-201ENST00000286758 JMYQ8N9B5 988 aa13.2□□□□□ -0.3
CXCL13-201ENST00000286758 PHF8Q9UPP1 1060 aa13.2□□□□□ -0.3
CXCL13-201ENST00000286758 CHD1O14646 1710 aa13.19□□□□□ -0.3
CXCL13-201ENST00000286758 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
CXCL13-201ENST00000286758 KLHL33A6NCF5 533 aa13.19□□□□□ -0.3
CXCL13-201ENST00000286758 GSCP56915 257 aaPredicted RBP13.19□□□□□ -0.3
CXCL13-201ENST00000286758 GPS2Q13227 327 aa13.19□□□□□ -0.3
CXCL13-201ENST00000286758 LRCH2Q5VUJ6 765 aa13.19□□□□□ -0.3
CXCL13-201ENST00000286758 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.19□□□□□ -0.3
CXCL13-201ENST00000286758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.19□□□□□ -0.3
CXCL13-201ENST00000286758 SLC34A2O95436 690 aa13.18□□□□□ -0.3
CXCL13-201ENST00000286758 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
CXCL13-201ENST00000286758 SLFNL1Q499Z3 407 aa13.18□□□□□ -0.3
CXCL13-201ENST00000286758 TBC1D22AQ8WUA7 517 aa13.18□□□□□ -0.3
CXCL13-201ENST00000286758 MKL1Q969V6 931 aa13.18□□□□□ -0.3
CXCL13-201ENST00000286758 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
CXCL13-201ENST00000286758 PAXBP1Q9Y5B6 917 aa13.18□□□□□ -0.3
CXCL13-201ENST00000286758 CGNL1Q0VF96 1302 aa13.17□□□□□ -0.3
CXCL13-201ENST00000286758 CTAGE5O15320 804 aa13.17□□□□□ -0.3
CXCL13-201ENST00000286758 U2AF2P26368 475 aaKnown RBP eCLIP13.17□□□□□ -0.3
CXCL13-201ENST00000286758 UVSSAQ2YD98 709 aa13.17□□□□□ -0.3
CXCL13-201ENST00000286758 C11orf91Q3C1V1 193 aa13.17□□□□□ -0.3
CXCL13-201ENST00000286758 HIRIP3Q9BW71 556 aaPredicted RBP13.17□□□□□ -0.3
CXCL13-201ENST00000286758 CXorf56Q9H5V9 222 aa13.17□□□□□ -0.3
CXCL13-201ENST00000286758 FAM53CQ9NYF3 392 aa13.17□□□□□ -0.3
CXCL13-201ENST00000286758 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
CXCL13-201ENST00000286758 PLEKHH1Q9ULM0 1364 aa13.17□□□□□ -0.3
CXCL13-201ENST00000286758 IGSF3O75054 1194 aa13.16□□□□□ -0.3
CXCL13-201ENST00000286758 ATP2B1P20020 1258 aa13.16□□□□□ -0.3
CXCL13-201ENST00000286758 NOLC1Q14978 699 aaKnown RBP eCLIP13.16□□□□□ -0.3
CXCL13-201ENST00000286758 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
CXCL13-201ENST00000286758 FAM184AQ8NB25 1140 aa13.16□□□□□ -0.3
CXCL13-201ENST00000286758 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
CXCL13-201ENST00000286758 CEP89Q96ST8 783 aa13.16□□□□□ -0.3
CXCL13-201ENST00000286758 JRKLQ9Y4A0 524 aa13.16□□□□□ -0.3
CXCL13-201ENST00000286758 DHX29Q7Z478 1369 aaKnown RBP13.16□□□□□ -0.3
CXCL13-201ENST00000286758 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
CXCL13-201ENST00000286758 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
CXCL13-201ENST00000286758 ERCC3P19447 782 aa13.15□□□□□ -0.3
CXCL13-201ENST00000286758 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
CXCL13-201ENST00000286758 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
CXCL13-201ENST00000286758 IRF6O14896 467 aa13.14□□□□□ -0.31
CXCL13-201ENST00000286758 NUCB2P80303 420 aa13.14□□□□□ -0.31
CXCL13-201ENST00000286758 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms