RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 RGPD8O14715 1765 aaPredicted RBP9.78□□□□□ -0.84
TRIM42-201ENST00000286349 RRP9O43818 475 aaKnown RBP9.77□□□□□ -0.85
TRIM42-201ENST00000286349 PLCB2Q00722 1185 aa9.77□□□□□ -0.85
TRIM42-201ENST00000286349 FTSJ3Q8IY81 847 aaKnown RBP9.77□□□□□ -0.85
TRIM42-201ENST00000286349 RUNDC1Q96C34 613 aa9.77□□□□□ -0.85
TRIM42-201ENST00000286349 SHPRHQ149N8 1683 aa9.77□□□□□ -0.85
TRIM42-201ENST00000286349 SENP3-EIF4A1A0A087X0R7 540 aa9.77□□□□□ -0.85
TRIM42-201ENST00000286349 XPCQ01831 940 aaPredicted RBP9.77□□□□□ -0.85
TRIM42-201ENST00000286349 SLFN5Q08AF3 891 aa9.77□□□□□ -0.85
TRIM42-201ENST00000286349 DUSP27Q5VZP5 1158 aa9.77□□□□□ -0.85
TRIM42-201ENST00000286349 TOPAZ1Q8N9V7 1692 aa9.76□□□□□ -0.85
TRIM42-201ENST00000286349 MTHFSP49914 203 aa9.76□□□□□ -0.85
TRIM42-201ENST00000286349 TRMT2AQ8IZ69 625 aaKnown RBP9.76□□□□□ -0.85
TRIM42-201ENST00000286349 NGDNQ8NEJ9 315 aaKnown RBP9.76□□□□□ -0.85
TRIM42-201ENST00000286349 APAF1O14727 1248 aa9.76□□□□□ -0.85
TRIM42-201ENST00000286349 TICAM2Q86XR7 235 aa9.76□□□□□ -0.85
TRIM42-201ENST00000286349 SSH2Q76I76 1423 aa9.75□□□□□ -0.85
TRIM42-201ENST00000286349 IGSF3O75054 1194 aa9.75□□□□□ -0.85
TRIM42-201ENST00000286349 GTF2E1P29083 439 aaPredicted RBP9.75□□□□□ -0.85
TRIM42-201ENST00000286349 CCDC27Q2M243 656 aa9.75□□□□□ -0.85
TRIM42-201ENST00000286349 KRT28Q7Z3Y7 464 aa9.75□□□□□ -0.85
TRIM42-201ENST00000286349 CCDC146Q8IYE0 955 aa9.75□□□□□ -0.85
TRIM42-201ENST00000286349 ZNF692Q9BU19 519 aaPredicted RBP9.75□□□□□ -0.85
TRIM42-201ENST00000286349 PSME1Q06323 249 aa9.74□□□□□ -0.85
TRIM42-201ENST00000286349 PNNQ9H307 717 aaKnown RBP9.74□□□□□ -0.85
TRIM42-201ENST00000286349 KIF20BQ96Q89 1820 aa9.74□□□□□ -0.85
TRIM42-201ENST00000286349 SECISBP2LQ93073 1101 aaKnown RBP9.74□□□□□ -0.85
TRIM42-201ENST00000286349 ZRANB1Q9UGI0 708 aa9.74□□□□□ -0.85
TRIM42-201ENST00000286349 SOS2Q07890 1332 aaPredicted RBP9.73□□□□□ -0.85
TRIM42-201ENST00000286349 USP6P35125 1406 aa9.73□□□□□ -0.85
TRIM42-201ENST00000286349 FYB1O15117 783 aa9.73□□□□□ -0.85
TRIM42-201ENST00000286349 TNNT2P45379 298 aaPredicted RBP9.73□□□□□ -0.85
TRIM42-201ENST00000286349 WDR63Q8IWG1 891 aa9.73□□□□□ -0.85
TRIM42-201ENST00000286349 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
TRIM42-201ENST00000286349 CANXP27824 592 aaKnown RBP9.73□□□□□ -0.85
TRIM42-201ENST00000286349 PXDNQ92626 1479 aa9.72□□□□□ -0.85
TRIM42-201ENST00000286349 EDC4Q6P2E9 1401 aaKnown RBP9.72□□□□□ -0.85
TRIM42-201ENST00000286349 ROBO1Q9Y6N7 1651 aa9.72□□□□□ -0.85
TRIM42-201ENST00000286349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRIM42-201ENST00000286349 ARID3AQ99856 593 aa9.72□□□□□ -0.85
TRIM42-201ENST00000286349 RNF216Q9NWF9 866 aaPredicted RBP9.72□□□□□ -0.85
TRIM42-201ENST00000286349 WWC1Q8IX03 1113 aa9.72□□□□□ -0.85
TRIM42-201ENST00000286349 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.72□□□□□ -0.85
TRIM42-201ENST00000286349 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.85
TRIM42-201ENST00000286349 NME9Q86XW9 330 aa9.71□□□□□ -0.85
TRIM42-201ENST00000286349 EXOC6Q8TAG9 804 aa9.71□□□□□ -0.85
TRIM42-201ENST00000286349 PHF23Q9BUL5 403 aaPredicted RBP9.71□□□□□ -0.85
TRIM42-201ENST00000286349 PNPLA6Q8IY17 1366 aa9.71□□□□□ -0.86
TRIM42-201ENST00000286349 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.86
TRIM42-201ENST00000286349 TCP11L2Q8N4U5 519 aa9.7□□□□□ -0.86
TRIM42-201ENST00000286349 COL3A1P02461 1466 aaPredicted RBP9.7□□□□□ -0.86
TRIM42-201ENST00000286349 SPATA31A3Q5VYP0 1347 aa9.7□□□□□ -0.86
TRIM42-201ENST00000286349 ITSN1Q15811 1721 aa9.7□□□□□ -0.86
TRIM42-201ENST00000286349 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
TRIM42-201ENST00000286349 U2AF1L5P0DN76 240 aaPredicted RBP9.7□□□□□ -0.86
TRIM42-201ENST00000286349 U2AF1Q01081 240 aaKnown RBP eCLIP9.7□□□□□ -0.86
TRIM42-201ENST00000286349 NUTM2GQ5VZR2 741 aa9.7□□□□□ -0.86
TRIM42-201ENST00000286349 HSPA1LP34931 641 aa9.69□□□□□ -0.86
TRIM42-201ENST00000286349 CALD1Q05682 793 aaKnown RBP9.69□□□□□ -0.86
TRIM42-201ENST00000286349 MYH16Q9H6N6 1097 aa9.69□□□□□ -0.86
TRIM42-201ENST00000286349 KIF1AQ12756 1690 aa9.69□□□□□ -0.86
TRIM42-201ENST00000286349 AKAP12Q02952 1782 aa9.69□□□□□ -0.86
TRIM42-201ENST00000286349 SBNO1A3KN83 1393 aa9.69□□□□□ -0.86
TRIM42-201ENST00000286349 FBLN1P23142 703 aa9.68□□□□□ -0.86
TRIM42-201ENST00000286349 HSP90AA2PQ14568 343 aaPredicted RBP9.68□□□□□ -0.86
TRIM42-201ENST00000286349 CNPY4Q8N129 248 aa9.68□□□□□ -0.86
TRIM42-201ENST00000286349 AHDC1Q5TGY3 1603 aaPredicted RBP9.68□□□□□ -0.86
TRIM42-201ENST00000286349 AATKQ6ZMQ8 1374 aa9.68□□□□□ -0.86
TRIM42-201ENST00000286349 DIAPH1O60610 1272 aaKnown RBP9.68□□□□□ -0.86
TRIM42-201ENST00000286349 CT47B1P0C2W7 299 aaPredicted RBP9.68□□□□□ -0.86
TRIM42-201ENST00000286349 NHSL1Q5SYE7 1610 aa9.68□□□□□ -0.86
TRIM42-201ENST00000286349 NRKQ7Z2Y5 1582 aa9.68□□□□□ -0.86
TRIM42-201ENST00000286349 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
TRIM42-201ENST00000286349 PRDM4Q9UKN5 801 aa9.67□□□□□ -0.86
TRIM42-201ENST00000286349 TTC21AQ8NDW8 1320 aa9.67□□□□□ -0.86
TRIM42-201ENST00000286349 MAPK8IP3Q9UPT6 1336 aa9.67□□□□□ -0.86
TRIM42-201ENST00000286349 MON2Q7Z3U7 1717 aa9.67□□□□□ -0.86
TRIM42-201ENST00000286349 TRPM3Q9HCF6 1732 aaPredicted RBP9.67□□□□□ -0.86
TRIM42-201ENST00000286349 CLSTN1O94985 981 aa9.67□□□□□ -0.86
TRIM42-201ENST00000286349 FBXO41Q8TF61 875 aa9.67□□□□□ -0.86
TRIM42-201ENST00000286349 NEFMP07197 916 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 NLRP6P59044 892 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 CABLES1Q8TDN4 633 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 LRRC59Q96AG4 307 aaKnown RBP9.66□□□□□ -0.86
TRIM42-201ENST00000286349 CRBNQ96SW2 442 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 USP31Q70CQ4 1352 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 TCERG1O14776 1098 aaKnown RBP9.66□□□□□ -0.86
TRIM42-201ENST00000286349 PLIN1O60240 522 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 FCHSD2O94868 740 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 PDE3AQ14432 1141 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 LMOD2Q6P5Q4 547 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 IL16Q14005 1332 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 TNS3Q68CZ2 1445 aa9.66□□□□□ -0.86
TRIM42-201ENST00000286349 COL16A1Q07092 1604 aaPredicted RBP9.66□□□□□ -0.86
TRIM42-201ENST00000286349 U2SURPO15042 1029 aaKnown RBP9.65□□□□□ -0.86
TRIM42-201ENST00000286349 PLEKHF1Q96S99 279 aa9.65□□□□□ -0.86
TRIM42-201ENST00000286349 SPINK5Q9NQ38 1064 aaPredicted RBP9.65□□□□□ -0.86
TRIM42-201ENST00000286349 CDK12Q9NYV4 1490 aaPredicted RBP9.65□□□□□ -0.86
TRIM42-201ENST00000286349 COG3Q96JB2 828 aa9.65□□□□□ -0.86
TRIM42-201ENST00000286349 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms