RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 HIP1O00291 1037 aa17.61■□□□□ 0.41
TRAPPC8-201ENST00000283351 CEBPZQ03701 1054 aaKnown RBP17.61■□□□□ 0.41
TRAPPC8-201ENST00000283351 C6orf229H3BNL8 230 aa17.6■□□□□ 0.41
TRAPPC8-201ENST00000283351 PDE4AP27815 886 aa17.6■□□□□ 0.41
TRAPPC8-201ENST00000283351 TSR2Q969E8 191 aaKnown RBP17.6■□□□□ 0.41
TRAPPC8-201ENST00000283351 MAGEC2Q9UBF1 373 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC8-201ENST00000283351 CDC45O75419 566 aa17.6■□□□□ 0.41
TRAPPC8-201ENST00000283351 C16orf71Q8IYS4 520 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC8-201ENST00000283351 UBAC1Q9BSL1 405 aa17.6■□□□□ 0.41
TRAPPC8-201ENST00000283351 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
TRAPPC8-201ENST00000283351 TOM1O60784 492 aa17.59■□□□□ 0.41
TRAPPC8-201ENST00000283351 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC8-201ENST00000283351 GPS2Q13227 327 aa17.59■□□□□ 0.41
TRAPPC8-201ENST00000283351 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
TRAPPC8-201ENST00000283351 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
TRAPPC8-201ENST00000283351 STK3Q13188 491 aa17.59■□□□□ 0.41
TRAPPC8-201ENST00000283351 NUDT16Q96DE0 195 aaKnown RBP17.59■□□□□ 0.41
TRAPPC8-201ENST00000283351 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
TRAPPC8-201ENST00000283351 NEBLO76041 1014 aa17.58■□□□□ 0.41
TRAPPC8-201ENST00000283351 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.41
TRAPPC8-201ENST00000283351 CAVIN4Q5BKX8 364 aa17.58■□□□□ 0.41
TRAPPC8-201ENST00000283351 FMNL2Q96PY5 1086 aa17.58■□□□□ 0.4
TRAPPC8-201ENST00000283351 NBPF1Q3BBV0 1214 aa17.58■□□□□ 0.4
TRAPPC8-201ENST00000283351 AACSQ86V21 672 aa17.58■□□□□ 0.4
TRAPPC8-201ENST00000283351 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC8-201ENST00000283351 WAPLQ7Z5K2 1190 aa17.57■□□□□ 0.4
TRAPPC8-201ENST00000283351 CCDC97Q96F63 343 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC8-201ENST00000283351 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
TRAPPC8-201ENST00000283351 RUFY1Q96T51 708 aa17.57■□□□□ 0.4
TRAPPC8-201ENST00000283351 TANGO6Q9C0B7 1094 aa17.56■□□□□ 0.4
TRAPPC8-201ENST00000283351 C8orf37Q96NL8 207 aa17.56■□□□□ 0.4
TRAPPC8-201ENST00000283351 STK38Q15208 465 aa17.56■□□□□ 0.4
TRAPPC8-201ENST00000283351 DZIP1Q86YF9 867 aaKnown RBP17.56■□□□□ 0.4
TRAPPC8-201ENST00000283351 WDR70Q9NW82 654 aa17.56■□□□□ 0.4
TRAPPC8-201ENST00000283351 CAGE1Q8TC20 777 aa17.55■□□□□ 0.4
TRAPPC8-201ENST00000283351 FGD6Q6ZV73 1430 aa17.55■□□□□ 0.4
TRAPPC8-201ENST00000283351 AIDAQ96BJ3 306 aa17.55■□□□□ 0.4
TRAPPC8-201ENST00000283351 KIF7Q2M1P5 1343 aa17.55■□□□□ 0.4
TRAPPC8-201ENST00000283351 SRGAP3O43295 1099 aa17.54■□□□□ 0.4
TRAPPC8-201ENST00000283351 CCT4P50991 539 aaKnown RBP17.54■□□□□ 0.4
TRAPPC8-201ENST00000283351 NAT10Q9H0A0 1025 aaKnown RBP17.54■□□□□ 0.4
TRAPPC8-201ENST00000283351 MIS18AQ9NYP9 233 aa17.54■□□□□ 0.4
TRAPPC8-201ENST00000283351 TRMT112Q9UI30 125 aaKnown RBP17.54■□□□□ 0.4
TRAPPC8-201ENST00000283351 PHF8Q9UPP1 1060 aa17.54■□□□□ 0.4
TRAPPC8-201ENST00000283351 SKIDA1Q1XH10 827 aa17.54■□□□□ 0.4
TRAPPC8-201ENST00000283351 MKNK2Q9HBH9 465 aa17.54■□□□□ 0.4
TRAPPC8-201ENST00000283351 RFC4P35249 363 aa17.53■□□□□ 0.4
TRAPPC8-201ENST00000283351 NOB1Q9ULX3 412 aaKnown RBP17.53■□□□□ 0.4
TRAPPC8-201ENST00000283351 FEZ1Q99689 392 aa17.53■□□□□ 0.4
TRAPPC8-201ENST00000283351 AMOTL2Q9Y2J4 779 aa17.53■□□□□ 0.4
TRAPPC8-201ENST00000283351 CCDC61Q9Y6R9 512 aa17.53■□□□□ 0.4
TRAPPC8-201ENST00000283351 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
TRAPPC8-201ENST00000283351 CA8P35219 290 aa17.53■□□□□ 0.4
TRAPPC8-201ENST00000283351 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC8-201ENST00000283351 NEK4P51957 841 aa17.52■□□□□ 0.4
TRAPPC8-201ENST00000283351 GNAT3A8MTJ3 354 aa17.52■□□□□ 0.4
TRAPPC8-201ENST00000283351 IFIT1P09914 478 aaKnown RBP17.52■□□□□ 0.4
TRAPPC8-201ENST00000283351 PPP2R1AP30153 589 aa17.52■□□□□ 0.4
TRAPPC8-201ENST00000283351 SEPT11Q9NVA2 429 aaKnown RBP17.52■□□□□ 0.4
TRAPPC8-201ENST00000283351 MINDY4BA8MYZ0 360 aa17.52■□□□□ 0.39
TRAPPC8-201ENST00000283351 KINO60870 393 aaKnown RBP17.52■□□□□ 0.39
TRAPPC8-201ENST00000283351 GPTP24298 496 aa17.52■□□□□ 0.39
TRAPPC8-201ENST00000283351 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.39
TRAPPC8-201ENST00000283351 C22orf23Q9BZE7 217 aa17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 NESP48681 1621 aa17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 CDR1P51861 262 aa17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 LRRCC1Q9C099 1032 aa17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 BMP2KQ9NSY1 1161 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 ERBINQ96RT1 1412 aa17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 TNIP1Q15025 636 aa17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 CCDC96Q2M329 555 aa17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 NUCB2P80303 420 aa17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 FILIP1LQ4L180 1135 aa17.51■□□□□ 0.39
TRAPPC8-201ENST00000283351 TRIM21P19474 475 aaKnown RBP17.5■□□□□ 0.39
TRAPPC8-201ENST00000283351 KRT28Q7Z3Y7 464 aa17.5■□□□□ 0.39
TRAPPC8-201ENST00000283351 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
TRAPPC8-201ENST00000283351 NOL7Q9UMY1 257 aaKnown RBP17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 SETQ01105 290 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 PPP4R3AQ6IN85 833 aa17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 TRMT1LQ7Z2T5 733 aaKnown RBP17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 VTI1AQ96AJ9 217 aa17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 MYD88Q99836 296 aa17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 CHRNA2Q15822 529 aa17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 SMC2O95347 1197 aa17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 IL1RAPL2Q9NP60 686 aa17.49■□□□□ 0.39
TRAPPC8-201ENST00000283351 ZNF396Q96N95 335 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC8-201ENST00000283351 BCAR3O75815 825 aa17.48■□□□□ 0.39
TRAPPC8-201ENST00000283351 CUX1P39880 1505 aa17.48■□□□□ 0.39
TRAPPC8-201ENST00000283351 MNS1Q8NEH6 495 aa17.48■□□□□ 0.39
TRAPPC8-201ENST00000283351 SEC63Q9UGP8 760 aaKnown RBP17.48■□□□□ 0.39
TRAPPC8-201ENST00000283351 CHMP5Q9NZZ3 219 aa17.47■□□□□ 0.39
TRAPPC8-201ENST00000283351 NEFHP12036 1026 aa17.47■□□□□ 0.39
TRAPPC8-201ENST00000283351 ACSBG1Q96GR2 724 aa17.47■□□□□ 0.39
TRAPPC8-201ENST00000283351 DESP17661 470 aa17.47■□□□□ 0.39
TRAPPC8-201ENST00000283351 STIM1Q13586 685 aa17.47■□□□□ 0.39
TRAPPC8-201ENST00000283351 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
TRAPPC8-201ENST00000283351 FBXO31Q5XUX0 539 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC8-201ENST00000283351 CD109Q6YHK3 1445 aa17.47■□□□□ 0.39
TRAPPC8-201ENST00000283351 NCOA2Q15596 1464 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms