RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 ARHGEF10O15013 1369 aa15.07■□□□□ 0
XRCC4-201ENST00000282268 NFAT5O94916 1531 aa15.06■□□□□ 0
XRCC4-201ENST00000282268 MED1Q15648 1581 aaPredicted RBP15.06■□□□□ 0
XRCC4-201ENST00000282268 SLIT3O75094 1523 aa15.05■□□□□ -0
XRCC4-201ENST00000282268 CERKQ8TCT0 537 aa15.05■□□□□ -0
XRCC4-201ENST00000282268 PRKAR2BP31323 418 aa15.04■□□□□ -0
XRCC4-201ENST00000282268 ARHGEF25Q86VW2 580 aa15.04■□□□□ -0
XRCC4-201ENST00000282268 IP6K1Q92551 441 aa15.04■□□□□ -0
XRCC4-201ENST00000282268 MAPK8IP3Q9UPT6 1336 aa15.04■□□□□ -0
XRCC4-201ENST00000282268 CHRNA2Q15822 529 aa15.03■□□□□ -0
XRCC4-201ENST00000282268 SULT6B1Q6IMI4 303 aa15.03■□□□□ -0
XRCC4-201ENST00000282268 AEBP1Q8IUX7 1158 aa15.03■□□□□ -0
XRCC4-201ENST00000282268 TCP11L2Q8N4U5 519 aa15.03■□□□□ -0
XRCC4-201ENST00000282268 NHSL1Q5SYE7 1610 aa15.03■□□□□ -0
XRCC4-201ENST00000282268 LTN1O94822 1766 aa15.02□□□□□ -0.01
XRCC4-201ENST00000282268 RSPH6AQ9H0K4 717 aa15.02□□□□□ -0.01
XRCC4-201ENST00000282268 FCHSD2O94868 740 aa15.01□□□□□ -0.01
XRCC4-201ENST00000282268 NEFMP07197 916 aa15.01□□□□□ -0.01
XRCC4-201ENST00000282268 USHBP1Q8N6Y0 703 aa15.01□□□□□ -0.01
XRCC4-201ENST00000282268 LRRC59Q96AG4 307 aaKnown RBP15.01□□□□□ -0.01
XRCC4-201ENST00000282268 PLEKHF1Q96S99 279 aa15.01□□□□□ -0.01
XRCC4-201ENST00000282268 EYA1Q99502 592 aa15.01□□□□□ -0.01
XRCC4-201ENST00000282268 PNNQ9H307 717 aaKnown RBP15.01□□□□□ -0.01
XRCC4-201ENST00000282268 RTL1A6NKG5 1358 aa15.01□□□□□ -0.01
XRCC4-201ENST00000282268 AXIN2Q9Y2T1 843 aa15□□□□□ -0.01
XRCC4-201ENST00000282268 PHRF1Q9P1Y6 1649 aaKnown RBP15□□□□□ -0.01
XRCC4-201ENST00000282268 KIAA0232Q92628 1395 aa15□□□□□ -0.01
XRCC4-201ENST00000282268 ANKRD24Q8TF21 1146 aa15□□□□□ -0.01
XRCC4-201ENST00000282268 KIF24Q5T7B8 1368 aa14.99□□□□□ -0.01
XRCC4-201ENST00000282268 CDCA7LQ96GN5 454 aa14.99□□□□□ -0.01
XRCC4-201ENST00000282268 PHACTR3Q96KR7 559 aa14.99□□□□□ -0.01
XRCC4-201ENST00000282268 PRDM11Q9NQV5 511 aa14.98□□□□□ -0.01
XRCC4-201ENST00000282268 AHDC1Q5TGY3 1603 aaPredicted RBP14.98□□□□□ -0.01
XRCC4-201ENST00000282268 PHLPP1O60346 1717 aa14.98□□□□□ -0.01
XRCC4-201ENST00000282268 CSB-PGBD3P0DP91 1061 aa14.97□□□□□ -0.01
XRCC4-201ENST00000282268 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
XRCC4-201ENST00000282268 RIPK4P57078 832 aa14.97□□□□□ -0.01
XRCC4-201ENST00000282268 IQSEC2Q5JU85 1478 aa14.96□□□□□ -0.01
XRCC4-201ENST00000282268 NBPF6Q5VWK0 638 aa14.96□□□□□ -0.01
XRCC4-201ENST00000282268 NBPF4Q96M43 638 aa14.96□□□□□ -0.01
XRCC4-201ENST00000282268 IGSF1Q8N6C5 1336 aa14.96□□□□□ -0.02
XRCC4-201ENST00000282268 NUTM2BA6NNL0 878 aaPredicted RBP14.95□□□□□ -0.02
XRCC4-201ENST00000282268 NUTM2EB1AL46 878 aaPredicted RBP14.95□□□□□ -0.02
XRCC4-201ENST00000282268 NUTM2AQ8IVF1 878 aaPredicted RBP14.95□□□□□ -0.02
XRCC4-201ENST00000282268 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
XRCC4-201ENST00000282268 WWC1Q8IX03 1113 aa14.94□□□□□ -0.02
XRCC4-201ENST00000282268 NLRP2Q9NX02 1062 aa14.94□□□□□ -0.02
XRCC4-201ENST00000282268 GOLGA2Q08379 1002 aa14.93□□□□□ -0.02
XRCC4-201ENST00000282268 NFE2L2Q16236 605 aa14.93□□□□□ -0.02
XRCC4-201ENST00000282268 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
XRCC4-201ENST00000282268 RGPD1P0DJD0 1748 aa14.93□□□□□ -0.02
XRCC4-201ENST00000282268 CPDO75976 1380 aa14.92□□□□□ -0.02
XRCC4-201ENST00000282268 ZNF521Q96K83 1311 aa14.92□□□□□ -0.02
XRCC4-201ENST00000282268 FAM83GA6ND36 823 aa14.92□□□□□ -0.02
XRCC4-201ENST00000282268 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
XRCC4-201ENST00000282268 STRN4Q9NRL3 753 aa14.92□□□□□ -0.02
XRCC4-201ENST00000282268 RGPD5Q99666 1765 aa14.92□□□□□ -0.02
XRCC4-201ENST00000282268 COL16A1Q07092 1604 aaPredicted RBP14.91□□□□□ -0.02
XRCC4-201ENST00000282268 ERBB3P21860 1342 aa14.91□□□□□ -0.02
XRCC4-201ENST00000282268 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
XRCC4-201ENST00000282268 TRIM35Q9UPQ4 493 aa14.91□□□□□ -0.02
XRCC4-201ENST00000282268 ABCA3Q99758 1704 aa14.91□□□□□ -0.02
XRCC4-201ENST00000282268 EVA1CP58658 441 aa14.9□□□□□ -0.02
XRCC4-201ENST00000282268 NGEFQ8N5V2 710 aa14.9□□□□□ -0.02
XRCC4-201ENST00000282268 THUMPD2Q9BTF0 503 aaKnown RBP14.9□□□□□ -0.02
XRCC4-201ENST00000282268 MTHFSDQ2M296 383 aaKnown RBP14.9□□□□□ -0.02
XRCC4-201ENST00000282268 SLFN5Q08AF3 891 aa14.89□□□□□ -0.03
XRCC4-201ENST00000282268 DCTN1Q14203 1278 aa14.89□□□□□ -0.03
XRCC4-201ENST00000282268 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
XRCC4-201ENST00000282268 RGPD2P0DJD1 1756 aa14.89□□□□□ -0.03
XRCC4-201ENST00000282268 KDRP35968 1356 aa14.89□□□□□ -0.03
XRCC4-201ENST00000282268 COL18A1P39060 1754 aa14.88□□□□□ -0.03
XRCC4-201ENST00000282268 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
XRCC4-201ENST00000282268 TOM1L2Q6ZVM7 507 aa14.88□□□□□ -0.03
XRCC4-201ENST00000282268 WDR63Q8IWG1 891 aa14.87□□□□□ -0.03
XRCC4-201ENST00000282268 BTG4Q9NY30 223 aa14.87□□□□□ -0.03
XRCC4-201ENST00000282268 SUPT16HQ9Y5B9 1047 aaKnown RBP14.87□□□□□ -0.03
XRCC4-201ENST00000282268 CAMTA1Q9Y6Y1 1673 aa14.87□□□□□ -0.03
XRCC4-201ENST00000282268 E9PSI1 815 aa14.87□□□□□ -0.03
XRCC4-201ENST00000282268 HSPA1LP34931 641 aa14.87□□□□□ -0.03
XRCC4-201ENST00000282268 COL22A1Q8NFW1 1626 aaPredicted RBP14.86□□□□□ -0.03
XRCC4-201ENST00000282268 MCM10Q7L590 875 aa14.86□□□□□ -0.03
XRCC4-201ENST00000282268 LMOD3Q0VAK6 560 aa14.85□□□□□ -0.03
XRCC4-201ENST00000282268 DUSP27Q5VZP5 1158 aa14.85□□□□□ -0.03
XRCC4-201ENST00000282268 LARP1Q6PKG0 1096 aaKnown RBP14.85□□□□□ -0.03
XRCC4-201ENST00000282268 GAS2L2Q8NHY3 880 aa14.85□□□□□ -0.03
XRCC4-201ENST00000282268 TSR2Q969E8 191 aaKnown RBP14.85□□□□□ -0.03
XRCC4-201ENST00000282268 USP35Q9P2H5 1018 aa14.85□□□□□ -0.03
XRCC4-201ENST00000282268 RAPGEF4Q8WZA2 1011 aa14.84□□□□□ -0.03
XRCC4-201ENST00000282268 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
XRCC4-201ENST00000282268 GTF3C3Q9Y5Q9 886 aa14.84□□□□□ -0.03
XRCC4-201ENST00000282268 WDR17Q8IZU2 1322 aa14.84□□□□□ -0.03
XRCC4-201ENST00000282268 COL5A2P05997 1499 aaPredicted RBP14.84□□□□□ -0.03
XRCC4-201ENST00000282268 TATP17735 454 aaPredicted RBP14.84□□□□□ -0.03
XRCC4-201ENST00000282268 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
XRCC4-201ENST00000282268 PLEKHO1Q53GL0 409 aaPredicted RBP14.84□□□□□ -0.03
XRCC4-201ENST00000282268 ABCC6O95255 1503 aa14.83□□□□□ -0.03
XRCC4-201ENST00000282268 JCADQ9P266 1359 aa14.83□□□□□ -0.04
XRCC4-201ENST00000282268 ZNF530Q6P9A1 599 aaPredicted RBP14.83□□□□□ -0.04
XRCC4-201ENST00000282268 MYH16Q9H6N6 1097 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 471.2 ms