RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 NPC1L1Q9UHC9 1359 aa32.3■■■□□ 2.76
CTF1-201ENST00000279804 MAP3K19Q56UN5 1328 aa32.29■■■□□ 2.76
CTF1-201ENST00000279804 AATKQ6ZMQ8 1374 aa32.29■■■□□ 2.76
CTF1-201ENST00000279804 AXIN2Q9Y2T1 843 aa32.28■■■□□ 2.76
CTF1-201ENST00000279804 EMILIN1Q9Y6C2 1016 aa32.25■■■□□ 2.75
CTF1-201ENST00000279804 UNC5CLQ8IV45 518 aa32.24■■■□□ 2.75
CTF1-201ENST00000279804 ABCC6O95255 1503 aa32.24■■■□□ 2.75
CTF1-201ENST00000279804 ZNF772Q68DY9 489 aaPredicted RBP32.24■■■□□ 2.75
CTF1-201ENST00000279804 COL5A2P05997 1499 aaPredicted RBP32.23■■■□□ 2.75
CTF1-201ENST00000279804 STRN4Q9NRL3 753 aa32.23■■■□□ 2.75
CTF1-201ENST00000279804 AMPHP49418 695 aa32.21■■■□□ 2.75
CTF1-201ENST00000279804 POLKQ9UBT6 870 aa32.21■■■□□ 2.75
CTF1-201ENST00000279804 PPM1GO15355 546 aaPredicted RBP32.2■■■□□ 2.74
CTF1-201ENST00000279804 POTEAQ6S8J7 498 aa32.2■■■□□ 2.74
CTF1-201ENST00000279804 RGPD2P0DJD1 1756 aa32.19■■■□□ 2.74
CTF1-201ENST00000279804 HOXC9P31274 260 aa32.19■■■□□ 2.74
CTF1-201ENST00000279804 IP6K1Q92551 441 aa32.19■■■□□ 2.74
CTF1-201ENST00000279804 QTRT2Q9H974 415 aaKnown RBP32.19■■■□□ 2.74
CTF1-201ENST00000279804 ATRNO75882 1429 aa32.19■■■□□ 2.74
CTF1-201ENST00000279804 EVA1CP58658 441 aa32.18■■■□□ 2.74
CTF1-201ENST00000279804 RTL1A6NKG5 1358 aa32.17■■■□□ 2.74
CTF1-201ENST00000279804 BLMP54132 1417 aaPredicted RBP32.15■■■□□ 2.74
CTF1-201ENST00000279804 TRPC5Q9UL62 973 aaPredicted RBP32.15■■■□□ 2.74
CTF1-201ENST00000279804 FLT4P35916 1363 aa32.15■■■□□ 2.74
CTF1-201ENST00000279804 LARP1Q6PKG0 1096 aaKnown RBP32.15■■■□□ 2.74
CTF1-201ENST00000279804 GLI3P10071 1580 aa32.14■■■□□ 2.74
CTF1-201ENST00000279804 HSP90AB2PQ58FF8 381 aa32.14■■■□□ 2.74
CTF1-201ENST00000279804 CCDC9Q9Y3X0 531 aaKnown RBP32.14■■■□□ 2.74
CTF1-201ENST00000279804 SMG6Q86US8 1419 aaKnown RBP32.13■■■□□ 2.73
CTF1-201ENST00000279804 VPS72Q15906 364 aa32.13■■■□□ 2.73
CTF1-201ENST00000279804 LTV1Q96GA3 475 aaPredicted RBP32.13■■■□□ 2.73
CTF1-201ENST00000279804 KIF24Q5T7B8 1368 aa32.12■■■□□ 2.73
CTF1-201ENST00000279804 PARD3Q8TEW0 1356 aa32.12■■■□□ 2.73
CTF1-201ENST00000279804 ANKRD24Q8TF21 1146 aa32.11■■■□□ 2.73
CTF1-201ENST00000279804 ERBB3P21860 1342 aa32.11■■■□□ 2.73
CTF1-201ENST00000279804 FAM208AQ9UK61 1670 aaKnown RBP32.11■■■□□ 2.73
CTF1-201ENST00000279804 WDR17Q8IZU2 1322 aa32.1■■■□□ 2.73
CTF1-201ENST00000279804 CSB-PGBD3P0DP91 1061 aa32.09■■■□□ 2.73
CTF1-201ENST00000279804 INSRP06213 1382 aa32.09■■■□□ 2.73
CTF1-201ENST00000279804 GJD4Q96KN9 370 aaPredicted RBP32.08■■■□□ 2.73
CTF1-201ENST00000279804 USP35Q9P2H5 1018 aa32.08■■■□□ 2.73
CTF1-201ENST00000279804 CRB1P82279 1406 aa32.08■■■□□ 2.73
CTF1-201ENST00000279804 MTHFSP49914 203 aa32.08■■■□□ 2.73
CTF1-201ENST00000279804 CDK12Q9NYV4 1490 aaPredicted RBP32.08■■■□□ 2.73
CTF1-201ENST00000279804 ANP32CO43423 234 aa32.07■■■□□ 2.72
CTF1-201ENST00000279804 TOM1L2Q6ZVM7 507 aa32.07■■■□□ 2.72
CTF1-201ENST00000279804 SPATA31A5Q5VU36 1347 aa32.07■■■□□ 2.72
CTF1-201ENST00000279804 SPATA31A7Q8IWB4 1347 aa32.07■■■□□ 2.72
CTF1-201ENST00000279804 MIER1Q8N108 512 aa32.06■■■□□ 2.72
CTF1-201ENST00000279804 PRKRIP1Q9H875 184 aaPredicted RBP32.06■■■□□ 2.72
CTF1-201ENST00000279804 PPP2R1AP30153 589 aa32.05■■■□□ 2.72
CTF1-201ENST00000279804 WNK3Q9BYP7 1800 aa32.05■■■□□ 2.72
CTF1-201ENST00000279804 SPATA31A1Q5TZJ5 1347 aa32.05■■■□□ 2.72
CTF1-201ENST00000279804 RBM6P78332 1123 aaKnown RBP32.04■■■□□ 2.72
CTF1-201ENST00000279804 RXRBP28702 533 aa32.03■■■□□ 2.72
CTF1-201ENST00000279804 NLRP2Q9NX02 1062 aa32.02■■■□□ 2.72
CTF1-201ENST00000279804 RALBP1Q15311 655 aa32■■■□□ 2.71
CTF1-201ENST00000279804 EIF4A2Q14240 407 aaKnown RBP31.99■■■□□ 2.71
CTF1-201ENST00000279804 FAM98CQ17RN3 349 aaKnown RBP31.98■■■□□ 2.71
CTF1-201ENST00000279804 BRWD3Q6RI45 1802 aa31.97■■■□□ 2.71
CTF1-201ENST00000279804 CARD10Q9BWT7 1032 aa31.97■■■□□ 2.71
CTF1-201ENST00000279804 NBPF6Q5VWK0 638 aa31.96■■■□□ 2.71
CTF1-201ENST00000279804 NBPF4Q96M43 638 aa31.96■■■□□ 2.71
CTF1-201ENST00000279804 TCP11L2Q8N4U5 519 aa31.95■■■□□ 2.71
CTF1-201ENST00000279804 COL3A1P02461 1466 aaPredicted RBP31.95■■■□□ 2.71
CTF1-201ENST00000279804 THSD7AQ9UPZ6 1657 aa31.95■■■□□ 2.71
CTF1-201ENST00000279804 USHBP1Q8N6Y0 703 aa31.95■■■□□ 2.7
CTF1-201ENST00000279804 RGS12O14924 1447 aa31.94■■■□□ 2.7
CTF1-201ENST00000279804 RGPD1P0DJD0 1748 aa31.93■■■□□ 2.7
CTF1-201ENST00000279804 MYBBP1AQ9BQG0 1328 aaKnown RBP31.91■■■□□ 2.7
CTF1-201ENST00000279804 A0A0G2JS52 829 aa31.9■■■□□ 2.7
CTF1-201ENST00000279804 MYT1Q01538 1121 aa31.9■■■□□ 2.7
CTF1-201ENST00000279804 EYA1Q99502 592 aa31.9■■■□□ 2.7
CTF1-201ENST00000279804 THRAP3Q9Y2W1 955 aaKnown RBP31.9■■■□□ 2.7
CTF1-201ENST00000279804 PARP4Q9UKK3 1724 aaKnown RBP31.9■■■□□ 2.7
CTF1-201ENST00000279804 BARGINQ6ZT62 677 aa31.89■■■□□ 2.7
CTF1-201ENST00000279804 IL13P35225 146 aa31.89■■■□□ 2.7
CTF1-201ENST00000279804 ONECUT3O60422 494 aaPredicted RBP31.88■■■□□ 2.69
CTF1-201ENST00000279804 LRRC37A3O60309 1634 aa31.87■■■□□ 2.69
CTF1-201ENST00000279804 ILDR2Q71H61 639 aa31.87■■■□□ 2.69
CTF1-201ENST00000279804 SEPT12Q8IYM1 358 aa31.87■■■□□ 2.69
CTF1-201ENST00000279804 DIAPH1O60610 1272 aaKnown RBP31.86■■■□□ 2.69
CTF1-201ENST00000279804 DISP2A7MBM2 1401 aa31.86■■■□□ 2.69
CTF1-201ENST00000279804 CFAP53Q96M91 514 aa31.86■■■□□ 2.69
CTF1-201ENST00000279804 NCAPD2Q15021 1401 aa31.84■■■□□ 2.69
CTF1-201ENST00000279804 IGSF1Q8N6C5 1336 aa31.83■■■□□ 2.69
CTF1-201ENST00000279804 MEGF6O75095 1541 aa31.83■■■□□ 2.69
CTF1-201ENST00000279804 IL2RBP14784 551 aa31.81■■■□□ 2.68
CTF1-201ENST00000279804 CCDC184Q52MB2 194 aa31.8■■■□□ 2.68
CTF1-201ENST00000279804 AEBP1Q8IUX7 1158 aa31.8■■■□□ 2.68
CTF1-201ENST00000279804 SHANK3Q9BYB0 1731 aa31.79■■■□□ 2.68
CTF1-201ENST00000279804 U2SURPO15042 1029 aaKnown RBP31.78■■■□□ 2.68
CTF1-201ENST00000279804 SULT6B1Q6IMI4 303 aa31.76■■■□□ 2.67
CTF1-201ENST00000279804 CDCA7Q9BWT1 371 aaPredicted RBP31.76■■■□□ 2.67
CTF1-201ENST00000279804 CCER2I3L3R5 266 aa31.75■■■□□ 2.67
CTF1-201ENST00000279804 HMOX1P09601 288 aa31.75■■■□□ 2.67
CTF1-201ENST00000279804 DDB1Q16531 1140 aa31.74■■■□□ 2.67
CTF1-201ENST00000279804 RAPGEF4Q8WZA2 1011 aa31.74■■■□□ 2.67
CTF1-201ENST00000279804 PKD1L3Q7Z443 1732 aa31.74■■■□□ 2.67
CTF1-201ENST00000279804 OVOS2A0A0G2JMS6 1433 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms