RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 CCDC39Q9UFE4 941 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 ZDHHC9Q9Y397 364 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 GLI2P10070 1586 aa11.33□□□□□ -0.59
HMGCLL1-201ENST00000274901 ERVK-7P63135 1459 aa11.33□□□□□ -0.6
HMGCLL1-201ENST00000274901 PPRC1Q5VV67 1664 aaKnown RBP11.33□□□□□ -0.6
HMGCLL1-201ENST00000274901 IGSF3O75054 1194 aa11.33□□□□□ -0.6
HMGCLL1-201ENST00000274901 EXOSC9Q06265 439 aaKnown RBP11.33□□□□□ -0.6
HMGCLL1-201ENST00000274901 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
HMGCLL1-201ENST00000274901 ZNF830Q96NB3 372 aaPredicted RBP11.33□□□□□ -0.6
HMGCLL1-201ENST00000274901 NOB1Q9ULX3 412 aaKnown RBP11.33□□□□□ -0.6
HMGCLL1-201ENST00000274901 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
HMGCLL1-201ENST00000274901 KIF16BQ96L93 1317 aa11.33□□□□□ -0.6
HMGCLL1-201ENST00000274901 LRSAM1Q6UWE0 723 aa11.32□□□□□ -0.6
HMGCLL1-201ENST00000274901 RICTORQ6R327 1708 aa11.32□□□□□ -0.6
HMGCLL1-201ENST00000274901 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
HMGCLL1-201ENST00000274901 ATF7IPQ6VMQ6 1270 aa11.32□□□□□ -0.6
HMGCLL1-201ENST00000274901 EFCAB6Q5THR3 1501 aa11.31□□□□□ -0.6
HMGCLL1-201ENST00000274901 DIP2CQ9Y2E4 1556 aa11.31□□□□□ -0.6
HMGCLL1-201ENST00000274901 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
HMGCLL1-201ENST00000274901 TMEM51Q9NW97 253 aa11.31□□□□□ -0.6
HMGCLL1-201ENST00000274901 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
HMGCLL1-201ENST00000274901 GTPBP4Q9BZE4 634 aaKnown RBP11.31□□□□□ -0.6
HMGCLL1-201ENST00000274901 KIAA2012Q0VF49 1180 aa11.3□□□□□ -0.6
HMGCLL1-201ENST00000274901 NPATQ14207 1427 aa11.3□□□□□ -0.6
HMGCLL1-201ENST00000274901 ZBTB22O15209 634 aa11.3□□□□□ -0.6
HMGCLL1-201ENST00000274901 ANKRD45Q5TZF3 282 aa11.3□□□□□ -0.6
HMGCLL1-201ENST00000274901 C1orf115Q9H7X2 142 aa11.3□□□□□ -0.6
HMGCLL1-201ENST00000274901 NOS1P29475 1434 aa11.29□□□□□ -0.6
HMGCLL1-201ENST00000274901 KIF20AO95235 890 aa11.29□□□□□ -0.6
HMGCLL1-201ENST00000274901 FOXD4L5Q5VV16 416 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-201ENST00000274901 FOXD4L4Q8WXT5 416 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-201ENST00000274901 SENP3Q9H4L4 574 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-201ENST00000274901 PPIP5K1Q6PFW1 1433 aa11.29□□□□□ -0.6
HMGCLL1-201ENST00000274901 GTF2F1P35269 517 aaKnown RBP eCLIP11.29□□□□□ -0.6
HMGCLL1-201ENST00000274901 ADGRF5Q8IZF2 1346 aa11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 NUCB2P80303 420 aa11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 DNTTIP2Q5QJE6 756 aaKnown RBP11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 NUTM2DQ5VT03 806 aaPredicted RBP11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 MORC1Q86VD1 984 aa11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 CHMP4BQ9H444 224 aaKnown RBP11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 NSD3Q9BZ95 1437 aa11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 GSPT1P15170 499 aaKnown RBP11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 MTHFSP49914 203 aa11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 MLECQ14165 292 aa11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 ABCC3O15438 1527 aa11.28□□□□□ -0.6
HMGCLL1-201ENST00000274901 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-201ENST00000274901 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
HMGCLL1-201ENST00000274901 CFAP70Q5T0N1 1121 aa11.27□□□□□ -0.61
HMGCLL1-201ENST00000274901 TTC12Q9H892 705 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-201ENST00000274901 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-201ENST00000274901 LMTK2Q8IWU2 1503 aa11.27□□□□□ -0.61
HMGCLL1-201ENST00000274901 VGLL3A8MV65 326 aa11.27□□□□□ -0.61
HMGCLL1-201ENST00000274901 U2AF2P26368 475 aaKnown RBP eCLIP11.27□□□□□ -0.61
HMGCLL1-201ENST00000274901 ADGRB2O60241 1585 aa11.26□□□□□ -0.61
HMGCLL1-201ENST00000274901 HMGN5P82970 282 aaKnown RBP11.26□□□□□ -0.61
HMGCLL1-201ENST00000274901 NOLC1Q14978 699 aaKnown RBP eCLIP11.26□□□□□ -0.61
HMGCLL1-201ENST00000274901 SIRT2Q8IXJ6 389 aa11.26□□□□□ -0.61
HMGCLL1-201ENST00000274901 PIBF1Q8WXW3 757 aa11.26□□□□□ -0.61
HMGCLL1-201ENST00000274901 RABEP1Q15276 862 aa11.26□□□□□ -0.61
HMGCLL1-201ENST00000274901 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
HMGCLL1-201ENST00000274901 TRIM35Q9UPQ4 493 aa11.25□□□□□ -0.61
HMGCLL1-201ENST00000274901 CDC45O75419 566 aa11.25□□□□□ -0.61
HMGCLL1-201ENST00000274901 U2AF1L5P0DN76 240 aaPredicted RBP11.25□□□□□ -0.61
HMGCLL1-201ENST00000274901 U2AF1Q01081 240 aaKnown RBP eCLIP11.25□□□□□ -0.61
HMGCLL1-201ENST00000274901 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
HMGCLL1-201ENST00000274901 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-201ENST00000274901 KIF1BO60333 1816 aa11.24□□□□□ -0.61
HMGCLL1-201ENST00000274901 MROH2AA6NES4 1674 aa11.24□□□□□ -0.61
HMGCLL1-201ENST00000274901 USP26Q9BXU7 913 aa11.24□□□□□ -0.61
HMGCLL1-201ENST00000274901 SLC12A5Q9H2X9 1139 aa11.24□□□□□ -0.61
HMGCLL1-201ENST00000274901 TSPY26PQ9H489 355 aa11.24□□□□□ -0.61
HMGCLL1-201ENST00000274901 KIF13AQ9H1H9 1805 aa11.23□□□□□ -0.61
HMGCLL1-201ENST00000274901 FKBP5Q13451 457 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-201ENST00000274901 PDCL2Q8N4E4 241 aa11.23□□□□□ -0.61
HMGCLL1-201ENST00000274901 CGNQ9P2M7 1197 aaKnown RBP11.23□□□□□ -0.61
HMGCLL1-201ENST00000274901 CAMSAP1Q5T5Y3 1602 aa11.23□□□□□ -0.61
HMGCLL1-201ENST00000274901 CT47B1P0C2W7 299 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-201ENST00000274901 IDI1Q13907 227 aa11.23□□□□□ -0.61
HMGCLL1-201ENST00000274901 SPTLC3Q9NUV7 552 aa11.23□□□□□ -0.61
HMGCLL1-201ENST00000274901 USP25Q9UHP3 1055 aa11.23□□□□□ -0.61
HMGCLL1-201ENST00000274901 SIGLEC1Q9BZZ2 1709 aa11.22□□□□□ -0.61
HMGCLL1-201ENST00000274901 MED14O60244 1454 aa11.22□□□□□ -0.61
HMGCLL1-201ENST00000274901 ZBTB7BO15156 539 aaPredicted RBP11.22□□□□□ -0.61
HMGCLL1-201ENST00000274901 GADD45BO75293 160 aaPredicted RBP11.21□□□□□ -0.61
HMGCLL1-201ENST00000274901 ANKRD7Q92527 254 aa11.21□□□□□ -0.61
HMGCLL1-201ENST00000274901 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
HMGCLL1-201ENST00000274901 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
HMGCLL1-201ENST00000274901 C16orf71Q8IYS4 520 aaPredicted RBP11.21□□□□□ -0.61
HMGCLL1-201ENST00000274901 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.61
HMGCLL1-201ENST00000274901 SMARCA5O60264 1052 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 OTUD7AQ8TE49 926 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 CWC22Q9HCG8 908 aaKnown RBP11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 TMPOP42166 694 aaKnown RBP11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 FOXD4L6Q3SYB3 417 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 TMEM132EQ6IEE7 984 aa11.2□□□□□ -0.62
HMGCLL1-201ENST00000274901 FOXD4L3Q6VB84 417 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms