RNA–Protein interactions for RNA: ENST00000274432.12

SPATA9-201, Transcript of spermatogenesis associated 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPATA9, Length 1,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-201ENST00000274432 IFT172Q9UG01 1749 aa9.31□□□□□ -0.92
SPATA9-201ENST00000274432 MICALL2Q8IY33 904 aa9.31□□□□□ -0.92
SPATA9-201ENST00000274432 CABLES1Q8TDN4 633 aa9.31□□□□□ -0.92
SPATA9-201ENST00000274432 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
SPATA9-201ENST00000274432 SPATA31A6Q5VVP1 1343 aa9.31□□□□□ -0.92
SPATA9-201ENST00000274432 NRXN1Q9ULB1 1477 aa9.3□□□□□ -0.92
SPATA9-201ENST00000274432 DOK7Q18PE1 504 aa9.3□□□□□ -0.92
SPATA9-201ENST00000274432 NBPF8Q3BBV2 869 aa9.3□□□□□ -0.92
SPATA9-201ENST00000274432 STAC3Q96MF2 364 aa9.3□□□□□ -0.92
SPATA9-201ENST00000274432 CDK19Q9BWU1 502 aa9.3□□□□□ -0.92
SPATA9-201ENST00000274432 MFRPQ9BY79 579 aa9.3□□□□□ -0.92
SPATA9-201ENST00000274432 RYDENQ9NUL5 291 aaKnown RBP9.3□□□□□ -0.92
SPATA9-201ENST00000274432 LRP6O75581 1613 aa9.3□□□□□ -0.92
SPATA9-201ENST00000274432 COL16A1Q07092 1604 aaPredicted RBP9.3□□□□□ -0.92
SPATA9-201ENST00000274432 AFF2P51816 1311 aa9.3□□□□□ -0.92
SPATA9-201ENST00000274432 MYOM2P54296 1465 aa9.29□□□□□ -0.92
SPATA9-201ENST00000274432 WASLO00401 505 aaPredicted RBP9.29□□□□□ -0.92
SPATA9-201ENST00000274432 EMP3P54852 163 aa9.29□□□□□ -0.92
SPATA9-201ENST00000274432 QTRT2Q9H974 415 aaKnown RBP9.29□□□□□ -0.92
SPATA9-201ENST00000274432 TECPR2O15040 1411 aa9.29□□□□□ -0.92
SPATA9-201ENST00000274432 NPHP3Q7Z494 1330 aa9.29□□□□□ -0.92
SPATA9-201ENST00000274432 PRR36Q9H6K5 1346 aa9.29□□□□□ -0.92
SPATA9-201ENST00000274432 PNPLA6Q8IY17 1366 aa9.28□□□□□ -0.92
SPATA9-201ENST00000274432 RIMBP2O15034 1052 aa9.28□□□□□ -0.92
SPATA9-201ENST00000274432 NUTM2GQ5VZR2 741 aa9.28□□□□□ -0.92
SPATA9-201ENST00000274432 NGDNQ8NEJ9 315 aaKnown RBP9.28□□□□□ -0.92
SPATA9-201ENST00000274432 MARVELD3Q96A59 401 aa9.28□□□□□ -0.92
SPATA9-201ENST00000274432 NUDT16Q96DE0 195 aaKnown RBP9.28□□□□□ -0.92
SPATA9-201ENST00000274432 AHDC1Q5TGY3 1603 aaPredicted RBP9.27□□□□□ -0.92
SPATA9-201ENST00000274432 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.93
SPATA9-201ENST00000274432 FBXO22Q8NEZ5 403 aa9.27□□□□□ -0.93
SPATA9-201ENST00000274432 RXRBP28702 533 aa9.26□□□□□ -0.93
SPATA9-201ENST00000274432 SRPK2P78362 688 aaKnown RBP9.26□□□□□ -0.93
SPATA9-201ENST00000274432 ZNF772Q68DY9 489 aaPredicted RBP9.26□□□□□ -0.93
SPATA9-201ENST00000274432 ADGRB1O14514 1584 aa9.25□□□□□ -0.93
SPATA9-201ENST00000274432 RGPD8O14715 1765 aaPredicted RBP9.25□□□□□ -0.93
SPATA9-201ENST00000274432 HOXB3P14651 431 aaPredicted RBP9.25□□□□□ -0.93
SPATA9-201ENST00000274432 USP21Q9UK80 565 aa9.25□□□□□ -0.93
SPATA9-201ENST00000274432 SPATA31A3Q5VYP0 1347 aa9.25□□□□□ -0.93
SPATA9-201ENST00000274432 PRAG1Q86YV5 1406 aa9.24□□□□□ -0.93
SPATA9-201ENST00000274432 ZSWIM6Q9HCJ5 1215 aa9.24□□□□□ -0.93
SPATA9-201ENST00000274432 CENPJQ9HC77 1338 aaPredicted RBP9.23□□□□□ -0.93
SPATA9-201ENST00000274432 NHSL1Q5SYE7 1610 aa9.23□□□□□ -0.93
SPATA9-201ENST00000274432 CDC42BPGQ6DT37 1551 aa9.22□□□□□ -0.93
SPATA9-201ENST00000274432 FAM83GA6ND36 823 aa9.22□□□□□ -0.93
SPATA9-201ENST00000274432 HOXB1P14653 301 aaPredicted RBP9.22□□□□□ -0.93
SPATA9-201ENST00000274432 TMEM92Q6UXU6 159 aa9.22□□□□□ -0.93
SPATA9-201ENST00000274432 CARD11Q9BXL7 1154 aa9.22□□□□□ -0.93
SPATA9-201ENST00000274432 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
SPATA9-201ENST00000274432 ACEP12821 1306 aa9.22□□□□□ -0.93
SPATA9-201ENST00000274432 ROCK2O75116 1388 aaKnown RBP9.22□□□□□ -0.93
SPATA9-201ENST00000274432 TONSLQ96HA7 1378 aa9.22□□□□□ -0.93
SPATA9-201ENST00000274432 KNDC1Q76NI1 1749 aa9.22□□□□□ -0.93
SPATA9-201ENST00000274432 PXDNQ92626 1479 aa9.21□□□□□ -0.93
SPATA9-201ENST00000274432 DLC1Q96QB1 1528 aa9.21□□□□□ -0.93
SPATA9-201ENST00000274432 PPP1R37O75864 691 aa9.21□□□□□ -0.94
SPATA9-201ENST00000274432 DAXXQ9UER7 740 aaPredicted RBP9.21□□□□□ -0.94
SPATA9-201ENST00000274432 CCDC9Q9Y3X0 531 aaKnown RBP9.21□□□□□ -0.94
SPATA9-201ENST00000274432 FMN2Q9NZ56 1722 aa9.21□□□□□ -0.94
SPATA9-201ENST00000274432 GPRASP1Q5JY77 1395 aa9.21□□□□□ -0.94
SPATA9-201ENST00000274432 LAMC1P11047 1609 aa9.2□□□□□ -0.94
SPATA9-201ENST00000274432 SHPRHQ149N8 1683 aa9.2□□□□□ -0.94
SPATA9-201ENST00000274432 ZBTB7CA1YPR0 619 aa9.2□□□□□ -0.94
SPATA9-201ENST00000274432 ZC3H6P61129 1189 aaKnown RBP9.2□□□□□ -0.94
SPATA9-201ENST00000274432 RBM6P78332 1123 aaKnown RBP9.2□□□□□ -0.94
SPATA9-201ENST00000274432 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
SPATA9-201ENST00000274432 CHRNA2Q15822 529 aa9.19□□□□□ -0.94
SPATA9-201ENST00000274432 ABTB2Q8N961 1025 aa9.19□□□□□ -0.94
SPATA9-201ENST00000274432 HS3ST6Q96QI5 342 aa9.19□□□□□ -0.94
SPATA9-201ENST00000274432 TRPC5Q9UL62 973 aaPredicted RBP9.19□□□□□ -0.94
SPATA9-201ENST00000274432 PLEKHG3A1L390 1219 aa9.18□□□□□ -0.94
SPATA9-201ENST00000274432 FAM205CA6NFA0 338 aa9.18□□□□□ -0.94
SPATA9-201ENST00000274432 USP32Q8NFA0 1604 aa9.18□□□□□ -0.94
SPATA9-201ENST00000274432 CCER1Q8TC90 406 aaPredicted RBP9.18□□□□□ -0.94
SPATA9-201ENST00000274432 ANKARQ7Z5J8 1434 aa9.17□□□□□ -0.94
SPATA9-201ENST00000274432 SBNO1A3KN83 1393 aa9.17□□□□□ -0.94
SPATA9-201ENST00000274432 EVC2Q86UK5 1308 aa9.17□□□□□ -0.94
SPATA9-201ENST00000274432 UNC5CLQ8IV45 518 aa9.17□□□□□ -0.94
SPATA9-201ENST00000274432 TMC1Q8TDI8 760 aa9.17□□□□□ -0.94
SPATA9-201ENST00000274432 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
SPATA9-201ENST00000274432 BTG4Q9NY30 223 aa9.17□□□□□ -0.94
SPATA9-201ENST00000274432 ARHGEF28Q8N1W1 1705 aaKnown RBP9.17□□□□□ -0.94
SPATA9-201ENST00000274432 TNS3Q68CZ2 1445 aa9.16□□□□□ -0.94
SPATA9-201ENST00000274432 ST20-MTHFSA0A0A6YYL1 179 aa9.16□□□□□ -0.94
SPATA9-201ENST00000274432 A0A0G2JS52 829 aa9.16□□□□□ -0.94
SPATA9-201ENST00000274432 MYT1Q01538 1121 aa9.16□□□□□ -0.94
SPATA9-201ENST00000274432 UPF1Q92900 1129 aaKnown RBP eCLIP9.16□□□□□ -0.94
SPATA9-201ENST00000274432 STRN4Q9NRL3 753 aa9.16□□□□□ -0.94
SPATA9-201ENST00000274432 TULP4Q9NRJ4 1543 aa9.15□□□□□ -0.94
SPATA9-201ENST00000274432 EIF3AQ14152 1382 aaKnown RBP9.15□□□□□ -0.94
SPATA9-201ENST00000274432 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.15□□□□□ -0.94
SPATA9-201ENST00000274432 SLC12A5Q9H2X9 1139 aa9.15□□□□□ -0.94
SPATA9-201ENST00000274432 USP35Q9P2H5 1018 aa9.15□□□□□ -0.94
SPATA9-201ENST00000274432 BCL9LQ86UU0 1499 aa9.15□□□□□ -0.95
SPATA9-201ENST00000274432 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
SPATA9-201ENST00000274432 EVA1CP58658 441 aa9.14□□□□□ -0.95
SPATA9-201ENST00000274432 FAM182BQ5T319 152 aa9.14□□□□□ -0.95
SPATA9-201ENST00000274432 SPNS2Q8IVW8 549 aa9.14□□□□□ -0.95
SPATA9-201ENST00000274432 PRDM11Q9NQV5 511 aa9.14□□□□□ -0.95
SPATA9-201ENST00000274432 ATP7BP35670 1465 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms