RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 CABP1Q9NZU7 370 aa29.62■■■□□ 2.33
RETREG2-201ENST00000273048 HDGFL2Q7Z4V5 671 aaPredicted RBP29.61■■■□□ 2.33
RETREG2-201ENST00000273048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.61■■■□□ 2.33
RETREG2-201ENST00000273048 BRPF1P55201 1214 aaPredicted RBP29.61■■■□□ 2.33
RETREG2-201ENST00000273048 GAS2L2Q8NHY3 880 aa29.61■■■□□ 2.33
RETREG2-201ENST00000273048 MYO5BQ9ULV0 1848 aa29.6■■■□□ 2.33
RETREG2-201ENST00000273048 SSFA2P28290 1259 aa29.6■■■□□ 2.33
RETREG2-201ENST00000273048 CYB5RLQ6IPT4 315 aa29.6■■■□□ 2.33
RETREG2-201ENST00000273048 FAM135BQ49AJ0 1406 aa29.59■■■□□ 2.33
RETREG2-201ENST00000273048 CDK19Q9BWU1 502 aa29.58■■■□□ 2.33
RETREG2-201ENST00000273048 SKOR2Q2VWA4 1001 aaPredicted RBP29.58■■■□□ 2.33
RETREG2-201ENST00000273048 ZNF428Q96B54 188 aa29.57■■■□□ 2.32
RETREG2-201ENST00000273048 TRIM44Q96DX7 344 aaPredicted RBP29.57■■■□□ 2.32
RETREG2-201ENST00000273048 POLKQ9UBT6 870 aa29.57■■■□□ 2.32
RETREG2-201ENST00000273048 PTCH1Q13635 1447 aa29.56■■■□□ 2.32
RETREG2-201ENST00000273048 NFE2L2Q16236 605 aa29.55■■■□□ 2.32
RETREG2-201ENST00000273048 PIK3R4Q99570 1358 aa29.55■■■□□ 2.32
RETREG2-201ENST00000273048 ZFYVE9O95405 1425 aa29.55■■■□□ 2.32
RETREG2-201ENST00000273048 ARHGAP31Q2M1Z3 1444 aa29.55■■■□□ 2.32
RETREG2-201ENST00000273048 ARHGAP45Q92619 1136 aa29.54■■■□□ 2.32
RETREG2-201ENST00000273048 MBIPQ9NS73 344 aa29.54■■■□□ 2.32
RETREG2-201ENST00000273048 YTHDC2Q9H6S0 1430 aaKnown RBP29.53■■■□□ 2.32
RETREG2-201ENST00000273048 GSPT1P15170 499 aaKnown RBP29.53■■■□□ 2.32
RETREG2-201ENST00000273048 ABCC4O15439 1325 aa29.52■■■□□ 2.32
RETREG2-201ENST00000273048 CDC45O75419 566 aa29.52■■■□□ 2.32
RETREG2-201ENST00000273048 CHMP4BQ9H444 224 aaKnown RBP29.52■■■□□ 2.32
RETREG2-201ENST00000273048 CDC42BPGQ6DT37 1551 aa29.51■■■□□ 2.32
RETREG2-201ENST00000273048 FBXO31Q5XUX0 539 aaPredicted RBP29.51■■■□□ 2.31
RETREG2-201ENST00000273048 KIF20BQ96Q89 1820 aa29.51■■■□□ 2.31
RETREG2-201ENST00000273048 CLTCQ00610 1675 aaKnown RBP29.5■■■□□ 2.31
RETREG2-201ENST00000273048 PREX1Q8TCU6 1659 aa29.5■■■□□ 2.31
RETREG2-201ENST00000273048 GNAI1P63096 354 aa29.49■■■□□ 2.31
RETREG2-201ENST00000273048 SLC52A1Q9NWF4 448 aa29.49■■■□□ 2.31
RETREG2-201ENST00000273048 AK9Q5TCS8 1911 aa29.49■■■□□ 2.31
RETREG2-201ENST00000273048 PTMSP20962 102 aa29.49■■■□□ 2.31
RETREG2-201ENST00000273048 TWISTNBQ3B726 338 aaPredicted RBP29.49■■■□□ 2.31
RETREG2-201ENST00000273048 C8orf58Q8NAV2 365 aa29.48■■■□□ 2.31
RETREG2-201ENST00000273048 IFT57Q9NWB7 429 aa29.48■■■□□ 2.31
RETREG2-201ENST00000273048 EMILIN1Q9Y6C2 1016 aa29.48■■■□□ 2.31
RETREG2-201ENST00000273048 BAG4O95429 457 aaKnown RBP29.47■■■□□ 2.31
RETREG2-201ENST00000273048 PLEKHM2Q8IWE5 1019 aa29.47■■■□□ 2.31
RETREG2-201ENST00000273048 TMEM131LA2VDJ0 1609 aa29.46■■■□□ 2.31
RETREG2-201ENST00000273048 DDX49Q9Y6V7 483 aaKnown RBP29.46■■■□□ 2.31
RETREG2-201ENST00000273048 ZNF853P0CG23 659 aa29.46■■■□□ 2.31
RETREG2-201ENST00000273048 GOLGA6L22H0YM25 854 aa29.45■■■□□ 2.31
RETREG2-201ENST00000273048 ARHGEF40Q8TER5 1519 aa29.45■■■□□ 2.31
RETREG2-201ENST00000273048 CALD1Q05682 793 aaKnown RBP29.45■■■□□ 2.3
RETREG2-201ENST00000273048 C16orf71Q8IYS4 520 aaPredicted RBP29.45■■■□□ 2.3
RETREG2-201ENST00000273048 FAM83GA6ND36 823 aa29.44■■■□□ 2.3
RETREG2-201ENST00000273048 NASPP49321 788 aaPredicted RBP29.43■■■□□ 2.3
RETREG2-201ENST00000273048 MAP2P11137 1827 aaKnown RBP29.42■■■□□ 2.3
RETREG2-201ENST00000273048 KLHL40Q2TBA0 621 aa29.42■■■□□ 2.3
RETREG2-201ENST00000273048 CLEC17AQ6ZS10 378 aa29.42■■■□□ 2.3
RETREG2-201ENST00000273048 KNDC1Q76NI1 1749 aa29.41■■■□□ 2.3
RETREG2-201ENST00000273048 IL13P35225 146 aa29.41■■■□□ 2.3
RETREG2-201ENST00000273048 DCTN1Q14203 1278 aa29.41■■■□□ 2.3
RETREG2-201ENST00000273048 WAPLQ7Z5K2 1190 aa29.41■■■□□ 2.3
RETREG2-201ENST00000273048 HSP90AA2PQ14568 343 aaPredicted RBP29.4■■■□□ 2.3
RETREG2-201ENST00000273048 API5Q9BZZ5 524 aaKnown RBP29.4■■■□□ 2.3
RETREG2-201ENST00000273048 MCTP1Q6DN14 999 aa29.4■■■□□ 2.3
RETREG2-201ENST00000273048 OTUD7AQ8TE49 926 aaPredicted RBP29.4■■■□□ 2.3
RETREG2-201ENST00000273048 ZRANB1Q9UGI0 708 aa29.4■■■□□ 2.3
RETREG2-201ENST00000273048 RABEP1Q15276 862 aa29.39■■■□□ 2.3
RETREG2-201ENST00000273048 TTC22Q5TAA0 569 aa29.39■■■□□ 2.3
RETREG2-201ENST00000273048 PKP1Q13835 747 aa29.39■■■□□ 2.3
RETREG2-201ENST00000273048 CFAP44Q96MT7 982 aa29.39■■■□□ 2.3
RETREG2-201ENST00000273048 FAM69CQ0P6D2 419 aa29.38■■■□□ 2.29
RETREG2-201ENST00000273048 CCDC173Q0VFZ6 552 aa29.38■■■□□ 2.29
RETREG2-201ENST00000273048 DCTPP1Q9H773 170 aa29.38■■■□□ 2.29
RETREG2-201ENST00000273048 NME9Q86XW9 330 aa29.37■■■□□ 2.29
RETREG2-201ENST00000273048 USP26Q9BXU7 913 aa29.37■■■□□ 2.29
RETREG2-201ENST00000273048 NCLP19338 710 aaKnown RBP29.36■■■□□ 2.29
RETREG2-201ENST00000273048 PPP1R9BQ96SB3 815 aa29.36■■■□□ 2.29
RETREG2-201ENST00000273048 ALKQ9UM73 1620 aa29.36■■■□□ 2.29
RETREG2-201ENST00000273048 TSPOAP1O95153 1857 aa29.35■■■□□ 2.29
RETREG2-201ENST00000273048 REREQ9P2R6 1566 aa29.35■■■□□ 2.29
RETREG2-201ENST00000273048 APBB1O00213 710 aa29.35■■■□□ 2.29
RETREG2-201ENST00000273048 STAG3Q9UJ98 1225 aa29.35■■■□□ 2.29
RETREG2-201ENST00000273048 CAVIN1Q6NZI2 390 aaKnown RBP29.34■■■□□ 2.29
RETREG2-201ENST00000273048 RIMBP3CA6NJZ7 1639 aa29.33■■■□□ 2.29
RETREG2-201ENST00000273048 RIMBP3BA6NNM3 1639 aa29.33■■■□□ 2.29
RETREG2-201ENST00000273048 RIMBP3Q9UFD9 1639 aa29.33■■■□□ 2.29
RETREG2-201ENST00000273048 DLG5Q8TDM6 1919 aa29.33■■■□□ 2.29
RETREG2-201ENST00000273048 RRP9O43818 475 aaKnown RBP29.33■■■□□ 2.29
RETREG2-201ENST00000273048 RIMS2Q9UQ26 1411 aa29.33■■■□□ 2.29
RETREG2-201ENST00000273048 SMARCA5O60264 1052 aaPredicted RBP29.32■■■□□ 2.28
RETREG2-201ENST00000273048 RRS1Q15050 365 aaKnown RBP29.32■■■□□ 2.28
RETREG2-201ENST00000273048 IBTKQ9P2D0 1353 aaPredicted RBP29.32■■■□□ 2.28
RETREG2-201ENST00000273048 KRT24Q2M2I5 525 aa29.32■■■□□ 2.28
RETREG2-201ENST00000273048 CYP2E1P05181 493 aaPredicted RBP29.31■■■□□ 2.28
RETREG2-201ENST00000273048 ANP32BQ92688 251 aaKnown RBP29.31■■■□□ 2.28
RETREG2-201ENST00000273048 LMBRD1Q9NUN5 540 aa29.31■■■□□ 2.28
RETREG2-201ENST00000273048 NUCB2P80303 420 aa29.3■■■□□ 2.28
RETREG2-201ENST00000273048 INTS3Q68E01 1043 aaKnown RBP29.3■■■□□ 2.28
RETREG2-201ENST00000273048 ZGPATQ8N5A5 531 aaKnown RBP29.3■■■□□ 2.28
RETREG2-201ENST00000273048 SDSP20132 328 aa29.3■■■□□ 2.28
RETREG2-201ENST00000273048 ATP7BP35670 1465 aa29.29■■■□□ 2.28
RETREG2-201ENST00000273048 LMOD3Q0VAK6 560 aa29.29■■■□□ 2.28
RETREG2-201ENST00000273048 ZSCAN23Q3MJ62 389 aa29.29■■■□□ 2.28
RETREG2-201ENST00000273048 ZSCAN30Q86W11 494 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms