RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 GTF2A1P52655 376 aaPredicted RBP18.52■□□□□ 0.55
UBR3-201ENST00000272793 PDE3BQ13370 1112 aa18.52■□□□□ 0.55
UBR3-201ENST00000272793 SPECC1Q5M775 1068 aa18.52■□□□□ 0.55
UBR3-201ENST00000272793 LARP1Q6PKG0 1096 aaKnown RBP18.52■□□□□ 0.55
UBR3-201ENST00000272793 LUZP1Q86V48 1076 aa18.51■□□□□ 0.55
UBR3-201ENST00000272793 PPP1R14CQ8TAE6 165 aa18.51■□□□□ 0.55
UBR3-201ENST00000272793 CTNNA2P26232 953 aa18.51■□□□□ 0.55
UBR3-201ENST00000272793 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
UBR3-201ENST00000272793 CASQ1P31415 396 aa18.51■□□□□ 0.55
UBR3-201ENST00000272793 SSBP05455 408 aaKnown RBP eCLIP18.5■□□□□ 0.55
UBR3-201ENST00000272793 MNAT1P51948 309 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 TSNARE1Q96NA8 513 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 ERC2O15083 957 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
UBR3-201ENST00000272793 RAI14Q9P0K7 980 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 MXRA7P84157 204 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 CCDC6Q16204 474 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 RGS22Q8NE09 1264 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 DDX58O95786 925 aaKnown RBP18.5■□□□□ 0.55
UBR3-201ENST00000272793 WDR78Q5VTH9 848 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 WHAMMQ8TF30 809 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 TERF2IPQ9NYB0 399 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 FBF1Q8TES7 1133 aa18.5■□□□□ 0.55
UBR3-201ENST00000272793 SH3BP5O60239 455 aa18.49■□□□□ 0.55
UBR3-201ENST00000272793 DZIP1LQ8IYY4 767 aaKnown RBP18.49■□□□□ 0.55
UBR3-201ENST00000272793 RPUSD2Q8IZ73 545 aaKnown RBP18.48■□□□□ 0.55
UBR3-201ENST00000272793 TNMDQ9H2S6 317 aa18.48■□□□□ 0.55
UBR3-201ENST00000272793 CGNQ9P2M7 1197 aaKnown RBP18.48■□□□□ 0.55
UBR3-201ENST00000272793 SETD5Q9C0A6 1442 aa18.48■□□□□ 0.55
UBR3-201ENST00000272793 FIBPO43427 364 aa18.48■□□□□ 0.55
UBR3-201ENST00000272793 EIF5P55010 431 aaKnown RBP18.48■□□□□ 0.55
UBR3-201ENST00000272793 DNA2P51530 1060 aa18.48■□□□□ 0.55
UBR3-201ENST00000272793 FAM107BQ9H098 131 aa18.47■□□□□ 0.55
UBR3-201ENST00000272793 MYCNP04198 464 aaPredicted RBP18.47■□□□□ 0.55
UBR3-201ENST00000272793 LMAN1P49257 510 aa18.47■□□□□ 0.55
UBR3-201ENST00000272793 BBXQ8WY36 941 aaPredicted RBP18.47■□□□□ 0.55
UBR3-201ENST00000272793 SEPT8Q92599 483 aa18.47■□□□□ 0.55
UBR3-201ENST00000272793 STK38Q15208 465 aa18.46■□□□□ 0.55
UBR3-201ENST00000272793 CALCOCO1Q9P1Z2 691 aa18.46■□□□□ 0.55
UBR3-201ENST00000272793 FSD2A1L4K1 749 aa18.46■□□□□ 0.55
UBR3-201ENST00000272793 CCDC192P0DO97 292 aa18.46■□□□□ 0.55
UBR3-201ENST00000272793 PAIP2Q9BPZ3 127 aaKnown RBP18.46■□□□□ 0.55
UBR3-201ENST00000272793 SUDS3Q9H7L9 328 aaPredicted RBP18.46■□□□□ 0.55
UBR3-201ENST00000272793 CBFA2T2O43439 604 aa18.46■□□□□ 0.55
UBR3-201ENST00000272793 ME1P48163 572 aa18.46■□□□□ 0.55
UBR3-201ENST00000272793 ROCK1Q13464 1354 aa18.46■□□□□ 0.55
UBR3-201ENST00000272793 ERCC3P19447 782 aa18.46■□□□□ 0.54
UBR3-201ENST00000272793 ODF2LQ9ULJ1 636 aa18.46■□□□□ 0.54
UBR3-201ENST00000272793 EEA1Q15075 1411 aa18.45■□□□□ 0.54
UBR3-201ENST00000272793 NAA25Q14CX7 972 aa18.45■□□□□ 0.54
UBR3-201ENST00000272793 CWC25Q9NXE8 425 aaPredicted RBP18.45■□□□□ 0.54
UBR3-201ENST00000272793 SPECC1LQ69YQ0 1117 aa18.45■□□□□ 0.54
UBR3-201ENST00000272793 GBP7Q8N8V2 638 aaPredicted RBP18.45■□□□□ 0.54
UBR3-201ENST00000272793 PDE1CQ14123 709 aaPredicted RBP18.45■□□□□ 0.54
UBR3-201ENST00000272793 DHX8Q14562 1220 aaKnown RBP18.45■□□□□ 0.54
UBR3-201ENST00000272793 MAP7D1Q3KQU3 841 aa18.45■□□□□ 0.54
UBR3-201ENST00000272793 PDCL2Q8N4E4 241 aa18.45■□□□□ 0.54
UBR3-201ENST00000272793 SLU7O95391 586 aaKnown RBP18.45■□□□□ 0.54
UBR3-201ENST00000272793 ZNF76P36508 570 aa18.45■□□□□ 0.54
UBR3-201ENST00000272793 IMMTQ16891 758 aaKnown RBP18.45■□□□□ 0.54
UBR3-201ENST00000272793 UBXN4Q92575 508 aa18.45■□□□□ 0.54
UBR3-201ENST00000272793 CCDC174Q6PII3 467 aa18.45■□□□□ 0.54
UBR3-201ENST00000272793 SREK1Q8WXA9 508 aaKnown RBP18.45■□□□□ 0.54
UBR3-201ENST00000272793 CCDC150Q8NCX0 1101 aa18.44■□□□□ 0.54
UBR3-201ENST00000272793 CNTROBQ8N137 903 aa18.44■□□□□ 0.54
UBR3-201ENST00000272793 A0A1W2PRG0 241 aa18.44■□□□□ 0.54
UBR3-201ENST00000272793 MCM3P25205 808 aa18.44■□□□□ 0.54
UBR3-201ENST00000272793 CEP120Q8N960 986 aa18.44■□□□□ 0.54
UBR3-201ENST00000272793 ARHGAP29Q52LW3 1261 aa18.44■□□□□ 0.54
UBR3-201ENST00000272793 ARID4AP29374 1257 aaPredicted RBP18.44■□□□□ 0.54
UBR3-201ENST00000272793 EPSTI1Q96J88 318 aa18.44■□□□□ 0.54
UBR3-201ENST00000272793 FERMT2Q96AC1 680 aa18.44■□□□□ 0.54
UBR3-201ENST00000272793 TAOK3Q9H2K8 898 aa18.44■□□□□ 0.54
UBR3-201ENST00000272793 DNAAF4Q8WXU2 420 aa18.43■□□□□ 0.54
UBR3-201ENST00000272793 DDX19BQ9UMR2 479 aa18.43■□□□□ 0.54
UBR3-201ENST00000272793 CEP135Q66GS9 1140 aa18.43■□□□□ 0.54
UBR3-201ENST00000272793 MIPOL1Q8TD10 442 aa18.43■□□□□ 0.54
UBR3-201ENST00000272793 CEP83Q9Y592 693 aa18.43■□□□□ 0.54
UBR3-201ENST00000272793 JMYQ8N9B5 988 aa18.43■□□□□ 0.54
UBR3-201ENST00000272793 SWAP70Q9UH65 585 aa18.43■□□□□ 0.54
UBR3-201ENST00000272793 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.43■□□□□ 0.54
UBR3-201ENST00000272793 BMP2KQ9NSY1 1161 aaPredicted RBP18.43■□□□□ 0.54
UBR3-201ENST00000272793 TBC1D2BQ9UPU7 963 aa18.42■□□□□ 0.54
UBR3-201ENST00000272793 HLTFQ14527 1009 aaKnown RBP eCLIP18.42■□□□□ 0.54
UBR3-201ENST00000272793 ANAPC4Q9UJX5 808 aa18.42■□□□□ 0.54
UBR3-201ENST00000272793 RBM5P52756 815 aaKnown RBP eCLIP18.42■□□□□ 0.54
UBR3-201ENST00000272793 CTR9Q6PD62 1173 aa18.42■□□□□ 0.54
UBR3-201ENST00000272793 IKBKGQ9Y6K9 419 aa18.42■□□□□ 0.54
UBR3-201ENST00000272793 SPA17Q15506 151 aa18.42■□□□□ 0.54
UBR3-201ENST00000272793 SCLT1Q96NL6 688 aa18.42■□□□□ 0.54
UBR3-201ENST00000272793 GBP3Q9H0R5 595 aa18.42■□□□□ 0.54
UBR3-201ENST00000272793 RIC3Q7Z5B4 369 aa18.41■□□□□ 0.54
UBR3-201ENST00000272793 RRP9O43818 475 aaKnown RBP18.41■□□□□ 0.54
UBR3-201ENST00000272793 CA8P35219 290 aa18.41■□□□□ 0.54
UBR3-201ENST00000272793 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
UBR3-201ENST00000272793 ATP2C2O75185 946 aa18.41■□□□□ 0.54
UBR3-201ENST00000272793 PDCP20941 246 aa18.41■□□□□ 0.54
UBR3-201ENST00000272793 PANK3Q9H999 370 aa18.41■□□□□ 0.54
UBR3-201ENST00000272793 MKRN1Q9UHC7 482 aaKnown RBP18.41■□□□□ 0.54
UBR3-201ENST00000272793 PPP1R12BO60237 982 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms