RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 SMC5Q8IY18 1101 aa13.67□□□□□ -0.22
PRUNE1-201ENST00000271620 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
PRUNE1-201ENST00000271620 MCM10Q7L590 875 aa13.66□□□□□ -0.22
PRUNE1-201ENST00000271620 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
PRUNE1-201ENST00000271620 ZBTB7BO15156 539 aaPredicted RBP13.66□□□□□ -0.22
PRUNE1-201ENST00000271620 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
PRUNE1-201ENST00000271620 CPS1P31327 1500 aa13.66□□□□□ -0.22
PRUNE1-201ENST00000271620 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
PRUNE1-201ENST00000271620 GNAI1P63096 354 aa13.65□□□□□ -0.22
PRUNE1-201ENST00000271620 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
PRUNE1-201ENST00000271620 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
PRUNE1-201ENST00000271620 CHD1LQ86WJ1 897 aa13.65□□□□□ -0.22
PRUNE1-201ENST00000271620 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 LTKP29376 864 aa13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 ATP7BP35670 1465 aa13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 ROBO2Q9HCK4 1378 aa13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 NUCB1Q02818 461 aa13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 SIRT2Q8IXJ6 389 aa13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 RIMBP3CA6NJZ7 1639 aa13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 RIMBP3BA6NNM3 1639 aa13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 RIMBP3Q9UFD9 1639 aa13.64□□□□□ -0.23
PRUNE1-201ENST00000271620 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 IFT57Q9NWB7 429 aa13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 PPP6R1Q9UPN7 881 aa13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 KIF20BQ96Q89 1820 aa13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 ANKRD26Q9UPS8 1709 aa13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 ACEP12821 1306 aa13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 APBB1O00213 710 aa13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 ANTXR1Q9H6X2 564 aa13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
PRUNE1-201ENST00000271620 ZNF853P0CG23 659 aa13.62□□□□□ -0.23
PRUNE1-201ENST00000271620 SPATA31D1Q6ZQQ2 1576 aa13.61□□□□□ -0.23
PRUNE1-201ENST00000271620 FOXO3O43524 673 aa13.61□□□□□ -0.23
PRUNE1-201ENST00000271620 CALD1Q05682 793 aaKnown RBP13.61□□□□□ -0.23
PRUNE1-201ENST00000271620 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
PRUNE1-201ENST00000271620 GZF1Q9H116 711 aaPredicted RBP13.6□□□□□ -0.23
PRUNE1-201ENST00000271620 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
PRUNE1-201ENST00000271620 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
PRUNE1-201ENST00000271620 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
PRUNE1-201ENST00000271620 NRXN3Q9Y4C0 1643 aa13.59□□□□□ -0.23
PRUNE1-201ENST00000271620 DLC1Q96QB1 1528 aa13.59□□□□□ -0.23
PRUNE1-201ENST00000271620 TNRQ92752 1358 aa13.59□□□□□ -0.23
PRUNE1-201ENST00000271620 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
PRUNE1-201ENST00000271620 AGLP35573 1532 aa13.58□□□□□ -0.24
PRUNE1-201ENST00000271620 C16orf71Q8IYS4 520 aaPredicted RBP13.58□□□□□ -0.24
PRUNE1-201ENST00000271620 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.24
PRUNE1-201ENST00000271620 SETD1AO15047 1707 aaKnown RBP13.57□□□□□ -0.24
PRUNE1-201ENST00000271620 CDK12Q9NYV4 1490 aaPredicted RBP13.57□□□□□ -0.24
PRUNE1-201ENST00000271620 LMOD3Q0VAK6 560 aa13.57□□□□□ -0.24
PRUNE1-201ENST00000271620 ZNF428Q96B54 188 aa13.57□□□□□ -0.24
PRUNE1-201ENST00000271620 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
PRUNE1-201ENST00000271620 AATKQ6ZMQ8 1374 aa13.57□□□□□ -0.24
PRUNE1-201ENST00000271620 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
PRUNE1-201ENST00000271620 ABCC4O15439 1325 aa13.56□□□□□ -0.24
PRUNE1-201ENST00000271620 ARHGAP45Q92619 1136 aa13.56□□□□□ -0.24
PRUNE1-201ENST00000271620 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
PRUNE1-201ENST00000271620 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
PRUNE1-201ENST00000271620 CDC42BPGQ6DT37 1551 aa13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 SLC4A10Q6U841 1118 aa13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 HSCBQ8IWL3 235 aa13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 OTUD7AQ8TE49 926 aaPredicted RBP13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 RBM33Q96EV2 1170 aaKnown RBP13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 CD2BP2O95400 341 aaKnown RBP13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 TBC1D9Q6ZT07 1266 aa13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 NGDNQ8NEJ9 315 aaKnown RBP13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 GCC1Q96CN9 775 aa13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 AMOTL2Q9Y2J4 779 aa13.55□□□□□ -0.24
PRUNE1-201ENST00000271620 F6X3S4 739 aa13.54□□□□□ -0.24
PRUNE1-201ENST00000271620 SMARCA5O60264 1052 aaPredicted RBP13.54□□□□□ -0.24
PRUNE1-201ENST00000271620 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
PRUNE1-201ENST00000271620 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
PRUNE1-201ENST00000271620 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
PRUNE1-201ENST00000271620 PTCH1Q13635 1447 aa13.53□□□□□ -0.24
PRUNE1-201ENST00000271620 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
PRUNE1-201ENST00000271620 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
PRUNE1-201ENST00000271620 MEIS3Q99687 375 aa13.53□□□□□ -0.24
PRUNE1-201ENST00000271620 ADAMTS13Q76LX8 1427 aa13.53□□□□□ -0.24
PRUNE1-201ENST00000271620 DLG5Q8TDM6 1919 aa13.53□□□□□ -0.24
PRUNE1-201ENST00000271620 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
PRUNE1-201ENST00000271620 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.24
PRUNE1-201ENST00000271620 CHL1O00533 1208 aa13.52□□□□□ -0.25
PRUNE1-201ENST00000271620 AMPHP49418 695 aa13.52□□□□□ -0.25
PRUNE1-201ENST00000271620 G2E3Q7L622 706 aa13.52□□□□□ -0.25
PRUNE1-201ENST00000271620 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
PRUNE1-201ENST00000271620 REREQ9P2R6 1566 aa13.51□□□□□ -0.25
PRUNE1-201ENST00000271620 HSP90AA1P07900 732 aaKnown RBP13.51□□□□□ -0.25
PRUNE1-201ENST00000271620 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
PRUNE1-201ENST00000271620 HSP90AB1P08238 724 aaKnown RBP13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 MCM4P33991 863 aa13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 KIF2CQ99661 725 aa13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 TSPYL4Q9UJ04 414 aa13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 RTF1Q92541 710 aaKnown RBP13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 CHMP4BQ9H444 224 aaKnown RBP13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 CHMP5Q9NZZ3 219 aa13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 PIK3R4Q99570 1358 aa13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 TECPR2O15040 1411 aa13.5□□□□□ -0.25
PRUNE1-201ENST00000271620 PTPRUQ92729 1446 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms