RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CPDO75976 1380 aa9.96□□□□□ -0.81
DEPDC1B-201ENST00000265036 KCNH5Q8NCM2 988 aa9.96□□□□□ -0.81
DEPDC1B-201ENST00000265036 COL5A2P05997 1499 aaPredicted RBP9.96□□□□□ -0.81
DEPDC1B-201ENST00000265036 ANKRD26Q9UPS8 1709 aa9.96□□□□□ -0.81
DEPDC1B-201ENST00000265036 RGS12O14924 1447 aa9.96□□□□□ -0.81
DEPDC1B-201ENST00000265036 RXRBP28702 533 aa9.96□□□□□ -0.82
DEPDC1B-201ENST00000265036 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
DEPDC1B-201ENST00000265036 ARHGEF25Q86VW2 580 aa9.96□□□□□ -0.82
DEPDC1B-201ENST00000265036 PPM1GO15355 546 aaPredicted RBP9.95□□□□□ -0.82
DEPDC1B-201ENST00000265036 CC2D1BQ5T0F9 858 aaKnown RBP9.95□□□□□ -0.82
DEPDC1B-201ENST00000265036 LTV1Q96GA3 475 aaPredicted RBP9.95□□□□□ -0.82
DEPDC1B-201ENST00000265036 KNSTRNQ9Y448 316 aa9.95□□□□□ -0.82
DEPDC1B-201ENST00000265036 MAP3K19Q56UN5 1328 aa9.95□□□□□ -0.82
DEPDC1B-201ENST00000265036 MAP2P11137 1827 aaKnown RBP9.95□□□□□ -0.82
DEPDC1B-201ENST00000265036 EVA1CP58658 441 aa9.95□□□□□ -0.82
DEPDC1B-201ENST00000265036 PEAK1Q9H792 1746 aa9.95□□□□□ -0.82
DEPDC1B-201ENST00000265036 RBM6P78332 1123 aaKnown RBP9.94□□□□□ -0.82
DEPDC1B-201ENST00000265036 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
DEPDC1B-201ENST00000265036 GJD4Q96KN9 370 aaPredicted RBP9.94□□□□□ -0.82
DEPDC1B-201ENST00000265036 EMILIN1Q9Y6C2 1016 aa9.94□□□□□ -0.82
DEPDC1B-201ENST00000265036 CSB-PGBD3P0DP91 1061 aa9.94□□□□□ -0.82
DEPDC1B-201ENST00000265036 AATKQ6ZMQ8 1374 aa9.94□□□□□ -0.82
DEPDC1B-201ENST00000265036 RGPD2P0DJD1 1756 aa9.94□□□□□ -0.82
DEPDC1B-201ENST00000265036 BRWD3Q6RI45 1802 aa9.93□□□□□ -0.82
DEPDC1B-201ENST00000265036 AMPHP49418 695 aa9.93□□□□□ -0.82
DEPDC1B-201ENST00000265036 VPS72Q15906 364 aa9.93□□□□□ -0.82
DEPDC1B-201ENST00000265036 TOM1L2Q6ZVM7 507 aa9.92□□□□□ -0.82
DEPDC1B-201ENST00000265036 DDX10Q13206 875 aaKnown RBP9.92□□□□□ -0.82
DEPDC1B-201ENST00000265036 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
DEPDC1B-201ENST00000265036 SPATA31A5Q5VU36 1347 aa9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 SPATA31A7Q8IWB4 1347 aa9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 FAM182BQ5T319 152 aa9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 ERBB3P21860 1342 aa9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 SRCAPQ6ZRS2 3230 aa9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 PER1O15534 1290 aaPredicted RBP9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 HOXC9P31274 260 aa9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 MORC1Q86VD1 984 aa9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
DEPDC1B-201ENST00000265036 SPATA31A1Q5TZJ5 1347 aa9.9□□□□□ -0.82
DEPDC1B-201ENST00000265036 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.82
DEPDC1B-201ENST00000265036 CRB1P82279 1406 aa9.9□□□□□ -0.82
DEPDC1B-201ENST00000265036 WDR17Q8IZU2 1322 aa9.9□□□□□ -0.82
DEPDC1B-201ENST00000265036 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.83
DEPDC1B-201ENST00000265036 USHBP1Q8N6Y0 703 aa9.9□□□□□ -0.83
DEPDC1B-201ENST00000265036 WNK3Q9BYP7 1800 aa9.89□□□□□ -0.83
DEPDC1B-201ENST00000265036 IP6K1Q92551 441 aa9.89□□□□□ -0.83
DEPDC1B-201ENST00000265036 KAT6BQ8WYB5 2073 aa9.89□□□□□ -0.83
DEPDC1B-201ENST00000265036 NSD2O96028 1365 aa9.88□□□□□ -0.83
DEPDC1B-201ENST00000265036 FLT4P35916 1363 aa9.88□□□□□ -0.83
DEPDC1B-201ENST00000265036 POLKQ9UBT6 870 aa9.88□□□□□ -0.83
DEPDC1B-201ENST00000265036 ABCC6O95255 1503 aa9.88□□□□□ -0.83
DEPDC1B-201ENST00000265036 THSD7AQ9UPZ6 1657 aa9.88□□□□□ -0.83
DEPDC1B-201ENST00000265036 BLMP54132 1417 aaPredicted RBP9.88□□□□□ -0.83
DEPDC1B-201ENST00000265036 TCP11L2Q8N4U5 519 aa9.88□□□□□ -0.83
DEPDC1B-201ENST00000265036 CDK12Q9NYV4 1490 aaPredicted RBP9.87□□□□□ -0.83
DEPDC1B-201ENST00000265036 RTL1A6NKG5 1358 aa9.87□□□□□ -0.83
DEPDC1B-201ENST00000265036 LRRC37A3O60309 1634 aa9.87□□□□□ -0.83
DEPDC1B-201ENST00000265036 SMG6Q86US8 1419 aaKnown RBP9.86□□□□□ -0.83
DEPDC1B-201ENST00000265036 FAM208AQ9UK61 1670 aaKnown RBP9.86□□□□□ -0.83
DEPDC1B-201ENST00000265036 INSRP06213 1382 aa9.85□□□□□ -0.83
DEPDC1B-201ENST00000265036 NBPF6Q5VWK0 638 aa9.85□□□□□ -0.83
DEPDC1B-201ENST00000265036 NBPF4Q96M43 638 aa9.85□□□□□ -0.83
DEPDC1B-201ENST00000265036 CARD10Q9BWT7 1032 aa9.84□□□□□ -0.83
DEPDC1B-201ENST00000265036 PARP4Q9UKK3 1724 aaKnown RBP9.84□□□□□ -0.83
DEPDC1B-201ENST00000265036 ZNF316A6NFI3 1004 aaPredicted RBP9.84□□□□□ -0.83
DEPDC1B-201ENST00000265036 KRT27Q7Z3Y8 459 aa9.84□□□□□ -0.83
DEPDC1B-201ENST00000265036 MEGF6O75095 1541 aa9.84□□□□□ -0.83
DEPDC1B-201ENST00000265036 MTHFSP49914 203 aa9.83□□□□□ -0.84
DEPDC1B-201ENST00000265036 SOCS7O14512 581 aa9.83□□□□□ -0.84
DEPDC1B-201ENST00000265036 EIF4A2Q14240 407 aaKnown RBP9.83□□□□□ -0.84
DEPDC1B-201ENST00000265036 DDB1Q16531 1140 aa9.82□□□□□ -0.84
DEPDC1B-201ENST00000265036 BARGINQ6ZT62 677 aa9.82□□□□□ -0.84
DEPDC1B-201ENST00000265036 DISP2A7MBM2 1401 aa9.82□□□□□ -0.84
DEPDC1B-201ENST00000265036 ONECUT3O60422 494 aaPredicted RBP9.82□□□□□ -0.84
DEPDC1B-201ENST00000265036 PDE3BQ13370 1112 aa9.82□□□□□ -0.84
DEPDC1B-201ENST00000265036 NPC1L1Q9UHC9 1359 aa9.82□□□□□ -0.84
DEPDC1B-201ENST00000265036 KIF24Q5T7B8 1368 aa9.81□□□□□ -0.84
DEPDC1B-201ENST00000265036 IL2RBP14784 551 aa9.81□□□□□ -0.84
DEPDC1B-201ENST00000265036 AEBP1Q8IUX7 1158 aa9.81□□□□□ -0.84
DEPDC1B-201ENST00000265036 EYA1Q99502 592 aa9.81□□□□□ -0.84
DEPDC1B-201ENST00000265036 THRAP3Q9Y2W1 955 aaKnown RBP9.81□□□□□ -0.84
DEPDC1B-201ENST00000265036 TNS2Q63HR2 1409 aa9.8□□□□□ -0.84
DEPDC1B-201ENST00000265036 SHANK3Q9BYB0 1731 aa9.8□□□□□ -0.84
DEPDC1B-201ENST00000265036 PPP2R1AP30153 589 aa9.8□□□□□ -0.84
DEPDC1B-201ENST00000265036 DDX54Q8TDD1 881 aaKnown RBP9.79□□□□□ -0.84
DEPDC1B-201ENST00000265036 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
DEPDC1B-201ENST00000265036 HMOX1P09601 288 aa9.79□□□□□ -0.84
DEPDC1B-201ENST00000265036 MARCH10Q8NA82 808 aaPredicted RBP9.79□□□□□ -0.84
DEPDC1B-201ENST00000265036 RAPGEF4Q8WZA2 1011 aa9.79□□□□□ -0.84
DEPDC1B-201ENST00000265036 PARD3Q8TEW0 1356 aa9.79□□□□□ -0.84
DEPDC1B-201ENST00000265036 COL3A1P02461 1466 aaPredicted RBP9.79□□□□□ -0.84
DEPDC1B-201ENST00000265036 U2SURPO15042 1029 aaKnown RBP9.78□□□□□ -0.84
DEPDC1B-201ENST00000265036 RGPD1P0DJD0 1748 aa9.78□□□□□ -0.84
DEPDC1B-201ENST00000265036 EXOC5O00471 708 aa9.78□□□□□ -0.84
DEPDC1B-201ENST00000265036 TRIM37O94972 964 aa9.78□□□□□ -0.84
DEPDC1B-201ENST00000265036 PTF1AQ7RTS3 328 aa9.78□□□□□ -0.84
DEPDC1B-201ENST00000265036 OVOS2A0A0G2JMS6 1433 aa9.78□□□□□ -0.84
DEPDC1B-201ENST00000265036 SULT6B1Q6IMI4 303 aa9.77□□□□□ -0.85
DEPDC1B-201ENST00000265036 ACSBG1Q96GR2 724 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms