RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 HMGN5P82970 282 aaKnown RBP21.38■■□□□ 1.01
COL5A3-201ENST00000264828 GNAI2P04899 355 aa21.37■■□□□ 1.01
COL5A3-201ENST00000264828 HIP1O00291 1037 aa21.37■■□□□ 1.01
COL5A3-201ENST00000264828 SIL1Q9H173 461 aa21.37■■□□□ 1.01
COL5A3-201ENST00000264828 CCAR1Q8IX12 1150 aaKnown RBP21.37■■□□□ 1.01
COL5A3-201ENST00000264828 GCC1Q96CN9 775 aa21.37■■□□□ 1.01
COL5A3-201ENST00000264828 SYCP1Q15431 976 aa21.36■■□□□ 1.01
COL5A3-201ENST00000264828 K7ELQ4 463 aaPredicted RBP21.36■■□□□ 1.01
COL5A3-201ENST00000264828 ME1P48163 572 aa21.36■■□□□ 1.01
COL5A3-201ENST00000264828 NLRP6P59044 892 aa21.36■■□□□ 1.01
COL5A3-201ENST00000264828 CFAP70Q5T0N1 1121 aa21.36■■□□□ 1.01
COL5A3-201ENST00000264828 CYP46A1Q9Y6A2 500 aa21.36■■□□□ 1.01
COL5A3-201ENST00000264828 PKNOX2Q96KN3 472 aa21.36■■□□□ 1.01
COL5A3-201ENST00000264828 NEFHP12036 1026 aa21.36■■□□□ 1.01
COL5A3-201ENST00000264828 FAM193AP78312 1265 aa21.35■■□□□ 1.01
COL5A3-201ENST00000264828 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
COL5A3-201ENST00000264828 PPFIBP1Q86W92 1011 aa21.35■■□□□ 1.01
COL5A3-201ENST00000264828 CCDC112Q8NEF3 446 aa21.35■■□□□ 1.01
COL5A3-201ENST00000264828 ESCO1Q5FWF5 840 aa21.35■■□□□ 1.01
COL5A3-201ENST00000264828 ZNHIT6Q9NWK9 470 aaKnown RBP21.34■■□□□ 1.01
COL5A3-201ENST00000264828 GPRASP1Q5JY77 1395 aa21.34■■□□□ 1.01
COL5A3-201ENST00000264828 DEF6Q9H4E7 631 aa21.34■■□□□ 1.01
COL5A3-201ENST00000264828 CCDC181Q5TID7 509 aa21.33■■□□□ 1.01
COL5A3-201ENST00000264828 TXNDC2Q86VQ3 553 aa21.33■■□□□ 1.01
COL5A3-201ENST00000264828 SLC4A2P04920 1241 aa21.33■■□□□ 1
COL5A3-201ENST00000264828 KIF6Q6ZMV9 814 aa21.33■■□□□ 1
COL5A3-201ENST00000264828 TANGO6Q9C0B7 1094 aa21.33■■□□□ 1
COL5A3-201ENST00000264828 CENPHQ9H3R5 247 aa21.33■■□□□ 1
COL5A3-201ENST00000264828 PRAM1Q96QH2 718 aa21.33■■□□□ 1
COL5A3-201ENST00000264828 ZHX3Q9H4I2 956 aa21.33■■□□□ 1
COL5A3-201ENST00000264828 GOLGA6L10A6NI86 522 aa21.32■■□□□ 1
COL5A3-201ENST00000264828 CNNM1Q9NRU3 951 aa21.32■■□□□ 1
COL5A3-201ENST00000264828 ABTB2Q8N961 1025 aa21.32■■□□□ 1
COL5A3-201ENST00000264828 ANKRD62A6NC57 917 aa21.32■■□□□ 1
COL5A3-201ENST00000264828 ERC1Q8IUD2 1116 aa21.32■■□□□ 1
COL5A3-201ENST00000264828 AEBP1Q8IUX7 1158 aa21.32■■□□□ 1
COL5A3-201ENST00000264828 RBM42Q9BTD8 480 aaKnown RBP21.32■■□□□ 1
COL5A3-201ENST00000264828 ATP2B2Q01814 1243 aa21.31■■□□□ 1
COL5A3-201ENST00000264828 SCAPERQ9BY12 1400 aa21.31■■□□□ 1
COL5A3-201ENST00000264828 SLC3A2P08195 630 aaKnown RBP21.31■■□□□ 1
COL5A3-201ENST00000264828 LRRCC1Q9C099 1032 aa21.31■■□□□ 1
COL5A3-201ENST00000264828 WDR33Q9C0J8 1336 aaKnown RBP21.31■■□□□ 1
COL5A3-201ENST00000264828 CCDC158Q5M9N0 1113 aa21.31■■□□□ 1
COL5A3-201ENST00000264828 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
COL5A3-201ENST00000264828 KIAA1107Q9UPP5 1409 aa21.31■■□□□ 1
COL5A3-201ENST00000264828 BACH2Q9BYV9 841 aa21.3■■□□□ 1
COL5A3-201ENST00000264828 SMG6Q86US8 1419 aaKnown RBP21.3■■□□□ 1
COL5A3-201ENST00000264828 ERLIN2O94905 339 aa21.3■■□□□ 1
COL5A3-201ENST00000264828 DAPK1P53355 1430 aa21.3■■□□□ 1
COL5A3-201ENST00000264828 PIP4K2AP48426 406 aaPredicted RBP21.3■■□□□ 1
COL5A3-201ENST00000264828 KIAA0754O94854 1291 aa21.29■■□□□ 1
COL5A3-201ENST00000264828 LARP1BQ659C4 914 aaKnown RBP21.29■■□□□ 1
COL5A3-201ENST00000264828 TROQ12816 1431 aaPredicted RBP21.29■■□□□ 1
COL5A3-201ENST00000264828 ENOX2Q16206 610 aaKnown RBP21.29■■□□□ 1
COL5A3-201ENST00000264828 NUP133Q8WUM0 1156 aa21.29■■□□□ 1
COL5A3-201ENST00000264828 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
COL5A3-201ENST00000264828 ERICH4A6NGS2 130 aa21.28■■□□□ 1
COL5A3-201ENST00000264828 JMYQ8N9B5 988 aa21.28■■□□□ 1
COL5A3-201ENST00000264828 CCDC69A6NI79 296 aa21.28■■□□□ 1
COL5A3-201ENST00000264828 KRT85P78386 507 aa21.28■■□□□ 1
COL5A3-201ENST00000264828 PDE3AQ14432 1141 aa21.28■■□□□ 1
COL5A3-201ENST00000264828 TAX1BP1Q86VP1 789 aa21.27■■□□□ 1
COL5A3-201ENST00000264828 DACH1Q9UI36 760 aa21.27■■□□□ 1
COL5A3-201ENST00000264828 HFM1A2PYH4 1435 aa21.27■■□□□ 1
COL5A3-201ENST00000264828 SEPT7Q16181 437 aaKnown RBP21.27■■□□□ 1
COL5A3-201ENST00000264828 SPATA32Q96LK8 384 aa21.27■■□□□ 1
COL5A3-201ENST00000264828 PAF1Q8N7H5 531 aa21.27■□□□□ 0.99
COL5A3-201ENST00000264828 ERBINQ96RT1 1412 aa21.26■□□□□ 0.99
COL5A3-201ENST00000264828 ANKRD1Q15327 319 aa21.26■□□□□ 0.99
COL5A3-201ENST00000264828 PDCL3Q9H2J4 239 aa21.26■□□□□ 0.99
COL5A3-201ENST00000264828 CDK19Q9BWU1 502 aa21.26■□□□□ 0.99
COL5A3-201ENST00000264828 PROSER2Q86WR7 435 aaPredicted RBP21.25■□□□□ 0.99
COL5A3-201ENST00000264828 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
COL5A3-201ENST00000264828 CHD1LQ86WJ1 897 aa21.25■□□□□ 0.99
COL5A3-201ENST00000264828 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.25■□□□□ 0.99
COL5A3-201ENST00000264828 HDGFL1Q5TGJ6 251 aa21.25■□□□□ 0.99
COL5A3-201ENST00000264828 PDRG1Q9NUG6 133 aa21.25■□□□□ 0.99
COL5A3-201ENST00000264828 PLEKHO1Q53GL0 409 aaPredicted RBP21.24■□□□□ 0.99
COL5A3-201ENST00000264828 TRIM22Q8IYM9 498 aa21.24■□□□□ 0.99
COL5A3-201ENST00000264828 SEPT11Q9NVA2 429 aaKnown RBP21.24■□□□□ 0.99
COL5A3-201ENST00000264828 MAPK8IP2Q13387 824 aaPredicted RBP21.24■□□□□ 0.99
COL5A3-201ENST00000264828 STIM1Q13586 685 aa21.24■□□□□ 0.99
COL5A3-201ENST00000264828 NBPF1Q3BBV0 1214 aa21.24■□□□□ 0.99
COL5A3-201ENST00000264828 CBFA2T2O43439 604 aa21.24■□□□□ 0.99
COL5A3-201ENST00000264828 CWC27Q6UX04 472 aaKnown RBP21.24■□□□□ 0.99
COL5A3-201ENST00000264828 JAKMIP1Q96N16 626 aaKnown RBP21.24■□□□□ 0.99
COL5A3-201ENST00000264828 ERLIN1O75477 346 aa21.23■□□□□ 0.99
COL5A3-201ENST00000264828 FILIP1Q7Z7B0 1213 aa21.23■□□□□ 0.99
COL5A3-201ENST00000264828 MYL6BP14649 208 aa21.23■□□□□ 0.99
COL5A3-201ENST00000264828 IQGAP2Q13576 1575 aa21.23■□□□□ 0.99
COL5A3-201ENST00000264828 PCF11O94913 1555 aaKnown RBP21.22■□□□□ 0.99
COL5A3-201ENST00000264828 AACSQ86V21 672 aa21.22■□□□□ 0.99
COL5A3-201ENST00000264828 NUP62CLQ9H1M0 184 aa21.22■□□□□ 0.99
COL5A3-201ENST00000264828 EIF3JO75822 258 aaKnown RBP21.22■□□□□ 0.99
COL5A3-201ENST00000264828 CCT4P50991 539 aaKnown RBP21.22■□□□□ 0.99
COL5A3-201ENST00000264828 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
COL5A3-201ENST00000264828 CCDC102AQ96A19 550 aa21.22■□□□□ 0.99
COL5A3-201ENST00000264828 FKBP4Q02790 459 aaKnown RBP eCLIP21.22■□□□□ 0.99
COL5A3-201ENST00000264828 CAMK4Q16566 473 aa21.22■□□□□ 0.99
COL5A3-201ENST00000264828 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms