RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 CHD1LQ86WJ1 897 aa13.94□□□□□ -0.18
PKP1-201ENST00000263946 SRCIN1Q9C0H9 1055 aa13.94□□□□□ -0.18
PKP1-201ENST00000263946 TPM2P07951 284 aa13.94□□□□□ -0.18
PKP1-201ENST00000263946 KCNH5Q8NCM2 988 aa13.94□□□□□ -0.18
PKP1-201ENST00000263946 GNAT3A8MTJ3 354 aa13.94□□□□□ -0.18
PKP1-201ENST00000263946 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
PKP1-201ENST00000263946 ALDH1L2Q3SY69 923 aa13.93□□□□□ -0.18
PKP1-201ENST00000263946 ACEP12821 1306 aa13.93□□□□□ -0.18
PKP1-201ENST00000263946 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
PKP1-201ENST00000263946 CDR1P51861 262 aa13.93□□□□□ -0.18
PKP1-201ENST00000263946 LRRFIP1Q32MZ4 808 aaKnown RBP13.93□□□□□ -0.18
PKP1-201ENST00000263946 NEUROD6Q96NK8 337 aa13.92□□□□□ -0.18
PKP1-201ENST00000263946 PRDM11Q9NQV5 511 aa13.92□□□□□ -0.18
PKP1-201ENST00000263946 TRIM27P14373 513 aa13.92□□□□□ -0.18
PKP1-201ENST00000263946 SKOR2Q2VWA4 1001 aaPredicted RBP13.92□□□□□ -0.18
PKP1-201ENST00000263946 TEX35Q5T0J7 233 aa13.92□□□□□ -0.18
PKP1-201ENST00000263946 ATP6V1DQ9Y5K8 247 aa13.92□□□□□ -0.18
PKP1-201ENST00000263946 PUS7Q96PZ0 661 aaKnown RBP13.92□□□□□ -0.18
PKP1-201ENST00000263946 MBD5Q9P267 1494 aa13.92□□□□□ -0.18
PKP1-201ENST00000263946 RNF20Q5VTR2 975 aa13.91□□□□□ -0.18
PKP1-201ENST00000263946 TOM1L2Q6ZVM7 507 aa13.91□□□□□ -0.18
PKP1-201ENST00000263946 RPAP2Q8IXW5 612 aaPredicted RBP13.91□□□□□ -0.18
PKP1-201ENST00000263946 FAM184AQ8NB25 1140 aa13.9□□□□□ -0.18
PKP1-201ENST00000263946 BTBD11A6QL63 1104 aa13.9□□□□□ -0.18
PKP1-201ENST00000263946 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
PKP1-201ENST00000263946 SPG7Q9UQ90 795 aa13.9□□□□□ -0.18
PKP1-201ENST00000263946 H3BQV1 296 aa13.89□□□□□ -0.19
PKP1-201ENST00000263946 IFFO2Q5TF58 517 aa13.89□□□□□ -0.19
PKP1-201ENST00000263946 LRRCC1Q9C099 1032 aa13.89□□□□□ -0.19
PKP1-201ENST00000263946 RIMS2Q9UQ26 1411 aa13.89□□□□□ -0.19
PKP1-201ENST00000263946 EIF2AK4Q9P2K8 1649 aaKnown RBP13.89□□□□□ -0.19
PKP1-201ENST00000263946 MARCH6O60337 910 aa13.89□□□□□ -0.19
PKP1-201ENST00000263946 NUCB2P80303 420 aa13.89□□□□□ -0.19
PKP1-201ENST00000263946 POLR3AO14802 1390 aaPredicted RBP13.89□□□□□ -0.19
PKP1-201ENST00000263946 TPD52L1Q16890 204 aaPredicted RBP13.89□□□□□ -0.19
PKP1-201ENST00000263946 CNTROBQ8N137 903 aa13.89□□□□□ -0.19
PKP1-201ENST00000263946 DDX54Q8TDD1 881 aaKnown RBP13.89□□□□□ -0.19
PKP1-201ENST00000263946 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
PKP1-201ENST00000263946 COL17A1Q9UMD9 1497 aaPredicted RBP13.89□□□□□ -0.19
PKP1-201ENST00000263946 FAM83GA6ND36 823 aa13.89□□□□□ -0.19
PKP1-201ENST00000263946 CABP4P57796 275 aa13.89□□□□□ -0.19
PKP1-201ENST00000263946 NOM1Q5C9Z4 860 aaKnown RBP13.89□□□□□ -0.19
PKP1-201ENST00000263946 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
PKP1-201ENST00000263946 KRI1Q8N9T8 703 aaKnown RBP13.88□□□□□ -0.19
PKP1-201ENST00000263946 SF3A1Q15459 793 aaKnown RBP13.88□□□□□ -0.19
PKP1-201ENST00000263946 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
PKP1-201ENST00000263946 NEK4P51957 841 aa13.88□□□□□ -0.19
PKP1-201ENST00000263946 SRGAP3O43295 1099 aa13.88□□□□□ -0.19
PKP1-201ENST00000263946 TAF7Q15545 349 aaPredicted RBP13.87□□□□□ -0.19
PKP1-201ENST00000263946 CREBRFQ8IUR6 639 aa13.87□□□□□ -0.19
PKP1-201ENST00000263946 MYL6BP14649 208 aa13.87□□□□□ -0.19
PKP1-201ENST00000263946 ZNF771Q7L3S4 317 aaPredicted RBP13.87□□□□□ -0.19
PKP1-201ENST00000263946 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
PKP1-201ENST00000263946 IPO7O95373 1038 aaKnown RBP13.87□□□□□ -0.19
PKP1-201ENST00000263946 APPP05067 770 aa13.87□□□□□ -0.19
PKP1-201ENST00000263946 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
PKP1-201ENST00000263946 TTC21BQ7Z4L5 1316 aa13.87□□□□□ -0.19
PKP1-201ENST00000263946 ABCA8O94911 1581 aa13.87□□□□□ -0.19
PKP1-201ENST00000263946 PATL2C9JE40 543 aaKnown RBP13.86□□□□□ -0.19
PKP1-201ENST00000263946 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
PKP1-201ENST00000263946 IL16Q14005 1332 aa13.86□□□□□ -0.19
PKP1-201ENST00000263946 MBIPQ9NS73 344 aa13.86□□□□□ -0.19
PKP1-201ENST00000263946 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
PKP1-201ENST00000263946 EXOC6BQ9Y2D4 811 aa13.86□□□□□ -0.19
PKP1-201ENST00000263946 PLEKHH1Q9ULM0 1364 aa13.86□□□□□ -0.19
PKP1-201ENST00000263946 RABEP1Q15276 862 aa13.86□□□□□ -0.19
PKP1-201ENST00000263946 SPATA31E1Q6ZUB1 1445 aa13.86□□□□□ -0.19
PKP1-201ENST00000263946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.85□□□□□ -0.19
PKP1-201ENST00000263946 GOLGA6L19H0YKK7 550 aa13.85□□□□□ -0.19
PKP1-201ENST00000263946 SMC3Q9UQE7 1217 aa13.85□□□□□ -0.19
PKP1-201ENST00000263946 PIK3C2GO75747 1445 aa13.85□□□□□ -0.19
PKP1-201ENST00000263946 F6X3S4 739 aa13.85□□□□□ -0.19
PKP1-201ENST00000263946 IL1RAPL2Q9NP60 686 aa13.85□□□□□ -0.19
PKP1-201ENST00000263946 ERC1Q8IUD2 1116 aa13.85□□□□□ -0.19
PKP1-201ENST00000263946 MAST1Q9Y2H9 1570 aa13.85□□□□□ -0.19
PKP1-201ENST00000263946 CCDC27Q2M243 656 aa13.85□□□□□ -0.19
PKP1-201ENST00000263946 ACBD3Q9H3P7 528 aa13.85□□□□□ -0.19
PKP1-201ENST00000263946 VPS37CA5D8V6 355 aaPredicted RBP13.84□□□□□ -0.19
PKP1-201ENST00000263946 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
PKP1-201ENST00000263946 GCC2Q8IWJ2 1684 aa13.84□□□□□ -0.19
PKP1-201ENST00000263946 SIL1Q9H173 461 aa13.84□□□□□ -0.19
PKP1-201ENST00000263946 PPIP5K1Q6PFW1 1433 aa13.84□□□□□ -0.19
PKP1-201ENST00000263946 IGHDP01880 384 aa13.84□□□□□ -0.19
PKP1-201ENST00000263946 ZMYM3Q14202 1370 aa13.84□□□□□ -0.19
PKP1-201ENST00000263946 CPLX2Q6PUV4 134 aaKnown RBP13.84□□□□□ -0.19
PKP1-201ENST00000263946 CCAR2Q8N163 923 aaKnown RBP13.84□□□□□ -0.19
PKP1-201ENST00000263946 A0A1W2PP64 1363 aa13.83□□□□□ -0.19
PKP1-201ENST00000263946 KDM6BO15054 1643 aa13.83□□□□□ -0.19
PKP1-201ENST00000263946 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.2
PKP1-201ENST00000263946 PES1O00541 588 aaKnown RBP13.83□□□□□ -0.2
PKP1-201ENST00000263946 AMOTQ4VCS5 1084 aa13.83□□□□□ -0.2
PKP1-201ENST00000263946 G3V3G9 751 aa13.82□□□□□ -0.2
PKP1-201ENST00000263946 ARHGEF5Q12774 1597 aa13.82□□□□□ -0.2
PKP1-201ENST00000263946 TRDNQ13061 729 aa13.82□□□□□ -0.2
PKP1-201ENST00000263946 WASHC4Q2M389 1173 aa13.82□□□□□ -0.2
PKP1-201ENST00000263946 DCAF8Q5TAQ9 597 aa13.82□□□□□ -0.2
PKP1-201ENST00000263946 ANKRD20A12PQ8NF67 263 aa13.82□□□□□ -0.2
PKP1-201ENST00000263946 CCDC47Q96A33 483 aaKnown RBP13.82□□□□□ -0.2
PKP1-201ENST00000263946 BECN2A8MW95 431 aa13.82□□□□□ -0.2
PKP1-201ENST00000263946 PRKCSHP14314 528 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms