RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 CWC27Q6UX04 472 aaKnown RBP16.84■□□□□ 0.29
TMCC3-201ENST00000261226 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
TMCC3-201ENST00000261226 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
TMCC3-201ENST00000261226 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
TMCC3-201ENST00000261226 PDRG1Q9NUG6 133 aa16.84■□□□□ 0.29
TMCC3-201ENST00000261226 SMARCA5O60264 1052 aaPredicted RBP16.84■□□□□ 0.29
TMCC3-201ENST00000261226 ANKRD1Q15327 319 aa16.84■□□□□ 0.29
TMCC3-201ENST00000261226 FAM177A1Q8N128 213 aaPredicted RBP16.84■□□□□ 0.29
TMCC3-201ENST00000261226 SRCIN1Q9C0H9 1055 aa16.84■□□□□ 0.29
TMCC3-201ENST00000261226 ERC1Q8IUD2 1116 aa16.83■□□□□ 0.29
TMCC3-201ENST00000261226 ERCC4Q92889 916 aaPredicted RBP16.83■□□□□ 0.29
TMCC3-201ENST00000261226 EXOC6BQ9Y2D4 811 aa16.83■□□□□ 0.29
TMCC3-201ENST00000261226 BRPF1P55201 1214 aaPredicted RBP16.83■□□□□ 0.28
TMCC3-201ENST00000261226 CDK19Q9BWU1 502 aa16.83■□□□□ 0.28
TMCC3-201ENST00000261226 LEKR1Q6ZMV7 388 aa16.83■□□□□ 0.28
TMCC3-201ENST00000261226 FCHSD2O94868 740 aa16.82■□□□□ 0.28
TMCC3-201ENST00000261226 CAMK4Q16566 473 aa16.82■□□□□ 0.28
TMCC3-201ENST00000261226 H0YHG0 523 aa16.82■□□□□ 0.28
TMCC3-201ENST00000261226 XRCC6P12956 609 aaKnown RBP eCLIP16.82■□□□□ 0.28
TMCC3-201ENST00000261226 SKIDA1Q1XH10 827 aa16.82■□□□□ 0.28
TMCC3-201ENST00000261226 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
TMCC3-201ENST00000261226 MAP3K1Q13233 1512 aa16.82■□□□□ 0.28
TMCC3-201ENST00000261226 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
TMCC3-201ENST00000261226 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
TMCC3-201ENST00000261226 CDK13Q14004 1512 aaKnown RBP16.81■□□□□ 0.28
TMCC3-201ENST00000261226 FERMT3Q86UX7 667 aa16.81■□□□□ 0.28
TMCC3-201ENST00000261226 ERICH4A6NGS2 130 aa16.81■□□□□ 0.28
TMCC3-201ENST00000261226 MAP3K11Q16584 847 aa16.81■□□□□ 0.28
TMCC3-201ENST00000261226 PANK2Q9BZ23 570 aa16.81■□□□□ 0.28
TMCC3-201ENST00000261226 SIL1Q9H173 461 aa16.81■□□□□ 0.28
TMCC3-201ENST00000261226 DHX16O60231 1041 aaKnown RBP16.81■□□□□ 0.28
TMCC3-201ENST00000261226 SRGAP3O43295 1099 aa16.8■□□□□ 0.28
TMCC3-201ENST00000261226 TRIM27P14373 513 aa16.8■□□□□ 0.28
TMCC3-201ENST00000261226 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
TMCC3-201ENST00000261226 RAPGEF4Q8WZA2 1011 aa16.8■□□□□ 0.28
TMCC3-201ENST00000261226 ZSCAN31Q96LW9 406 aaPredicted RBP16.8■□□□□ 0.28
TMCC3-201ENST00000261226 USP25Q9UHP3 1055 aa16.8■□□□□ 0.28
TMCC3-201ENST00000261226 TMX4Q9H1E5 349 aaPredicted RBP16.8■□□□□ 0.28
TMCC3-201ENST00000261226 MAPKBP1O60336 1514 aa16.8■□□□□ 0.28
TMCC3-201ENST00000261226 G3V3G9 751 aa16.79■□□□□ 0.28
TMCC3-201ENST00000261226 CASTP20810 708 aaKnown RBP16.79■□□□□ 0.28
TMCC3-201ENST00000261226 DCAF8Q5TAQ9 597 aa16.79■□□□□ 0.28
TMCC3-201ENST00000261226 PODXL2Q9NZ53 605 aa16.79■□□□□ 0.28
TMCC3-201ENST00000261226 SYNJ2O15056 1496 aa16.79■□□□□ 0.28
TMCC3-201ENST00000261226 FILIP1LQ4L180 1135 aa16.79■□□□□ 0.28
TMCC3-201ENST00000261226 GRIN2BQ13224 1484 aa16.79■□□□□ 0.28
TMCC3-201ENST00000261226 BAG4O95429 457 aaKnown RBP16.79■□□□□ 0.28
TMCC3-201ENST00000261226 VPS37DQ86XT2 251 aa16.79■□□□□ 0.28
TMCC3-201ENST00000261226 GPRASP1Q5JY77 1395 aa16.79■□□□□ 0.28
TMCC3-201ENST00000261226 NUTM1Q86Y26 1132 aa16.79■□□□□ 0.28
TMCC3-201ENST00000261226 CLCN1P35523 988 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 C8orf34Q49A92 452 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 CEP57L1Q8IYX8 460 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 RAD21O60216 631 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
TMCC3-201ENST00000261226 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 EPRSP07814 1512 aaKnown RBP16.78■□□□□ 0.28
TMCC3-201ENST00000261226 RPRD2Q5VT52 1461 aaKnown RBP16.78■□□□□ 0.28
TMCC3-201ENST00000261226 AXDND1Q5T1B0 1012 aaPredicted RBP16.78■□□□□ 0.28
TMCC3-201ENST00000261226 PTPN23Q9H3S7 1636 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 AMOTL1Q8IY63 956 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 SMARCE1Q969G3 411 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 CCDC83Q8IWF9 413 aa16.78■□□□□ 0.28
TMCC3-201ENST00000261226 CDR1P51861 262 aa16.77■□□□□ 0.28
TMCC3-201ENST00000261226 TBC1D9Q6ZT07 1266 aa16.77■□□□□ 0.28
TMCC3-201ENST00000261226 ZMYND15Q9H091 742 aa16.77■□□□□ 0.28
TMCC3-201ENST00000261226 XBP1P17861 261 aa16.77■□□□□ 0.28
TMCC3-201ENST00000261226 GDPD2Q9HCC8 539 aa16.77■□□□□ 0.28
TMCC3-201ENST00000261226 AACSQ86V21 672 aa16.77■□□□□ 0.28
TMCC3-201ENST00000261226 BRMS1Q9HCU9 246 aa16.77■□□□□ 0.28
TMCC3-201ENST00000261226 CFAP45Q9UL16 551 aa16.77■□□□□ 0.28
TMCC3-201ENST00000261226 ALDH1L2Q3SY69 923 aa16.77■□□□□ 0.27
TMCC3-201ENST00000261226 RBM27Q9P2N5 1060 aaKnown RBP16.77■□□□□ 0.27
TMCC3-201ENST00000261226 JMYQ8N9B5 988 aa16.76■□□□□ 0.27
TMCC3-201ENST00000261226 MX1P20591 662 aa16.76■□□□□ 0.27
TMCC3-201ENST00000261226 ABCC5O15440 1437 aa16.76■□□□□ 0.27
TMCC3-201ENST00000261226 DHX8Q14562 1220 aaKnown RBP16.76■□□□□ 0.27
TMCC3-201ENST00000261226 FYB1O15117 783 aa16.76■□□□□ 0.27
TMCC3-201ENST00000261226 EVA1CP58658 441 aa16.76■□□□□ 0.27
TMCC3-201ENST00000261226 TXNDC2Q86VQ3 553 aa16.76■□□□□ 0.27
TMCC3-201ENST00000261226 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
TMCC3-201ENST00000261226 KLHL40Q2TBA0 621 aa16.75■□□□□ 0.27
TMCC3-201ENST00000261226 STK11IPQ8N1F8 1099 aa16.75■□□□□ 0.27
TMCC3-201ENST00000261226 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
TMCC3-201ENST00000261226 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
TMCC3-201ENST00000261226 BMP2KLQ5H9B9 411 aa16.75■□□□□ 0.27
TMCC3-201ENST00000261226 DDX11Q96FC9 970 aa16.75■□□□□ 0.27
TMCC3-201ENST00000261226 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
TMCC3-201ENST00000261226 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
TMCC3-201ENST00000261226 PPFIBP1Q86W92 1011 aa16.74■□□□□ 0.27
TMCC3-201ENST00000261226 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
TMCC3-201ENST00000261226 OFD1O75665 1012 aa16.74■□□□□ 0.27
TMCC3-201ENST00000261226 SART3Q15020 963 aaKnown RBP16.74■□□□□ 0.27
TMCC3-201ENST00000261226 PTPN14Q15678 1187 aa16.74■□□□□ 0.27
TMCC3-201ENST00000261226 UBXN4Q92575 508 aa16.74■□□□□ 0.27
TMCC3-201ENST00000261226 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
TMCC3-201ENST00000261226 PCDHB15Q9Y5E8 787 aa16.73■□□□□ 0.27
TMCC3-201ENST00000261226 DDX54Q8TDD1 881 aaKnown RBP16.73■□□□□ 0.27
TMCC3-201ENST00000261226 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms