RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
COL8A1-201ENST00000261037 MRE11P49959 708 aa14.42□□□□□ -0.1
COL8A1-201ENST00000261037 XPCQ01831 940 aaPredicted RBP14.42□□□□□ -0.1
COL8A1-201ENST00000261037 ACBD3Q9H3P7 528 aa14.42□□□□□ -0.1
COL8A1-201ENST00000261037 AAMPQ13685 434 aa14.42□□□□□ -0.1
COL8A1-201ENST00000261037 RRS1Q15050 365 aaKnown RBP14.42□□□□□ -0.1
COL8A1-201ENST00000261037 NUP133Q8WUM0 1156 aa14.42□□□□□ -0.1
COL8A1-201ENST00000261037 CUL7Q14999 1698 aa14.42□□□□□ -0.1
COL8A1-201ENST00000261037 CDR1P51861 262 aa14.42□□□□□ -0.1
COL8A1-201ENST00000261037 HSP90B2PQ58FF3 399 aa14.42□□□□□ -0.1
COL8A1-201ENST00000261037 ZNF396Q96N95 335 aaPredicted RBP14.42□□□□□ -0.1
COL8A1-201ENST00000261037 ZNF530Q6P9A1 599 aaPredicted RBP14.41□□□□□ -0.1
COL8A1-201ENST00000261037 LRRCC1Q9C099 1032 aa14.41□□□□□ -0.1
COL8A1-201ENST00000261037 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
COL8A1-201ENST00000261037 GCC1Q96CN9 775 aa14.41□□□□□ -0.1
COL8A1-201ENST00000261037 ZHX3Q9H4I2 956 aa14.41□□□□□ -0.1
COL8A1-201ENST00000261037 LETM1O95202 739 aaPredicted RBP14.41□□□□□ -0.1
COL8A1-201ENST00000261037 RBM5P52756 815 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL8A1-201ENST00000261037 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL8A1-201ENST00000261037 IQGAP2Q13576 1575 aa14.4□□□□□ -0.1
COL8A1-201ENST00000261037 C9orf84Q5VXU9 1444 aa14.4□□□□□ -0.1
COL8A1-201ENST00000261037 CCDC69A6NI79 296 aa14.4□□□□□ -0.1
COL8A1-201ENST00000261037 TXLNAP40222 546 aa14.4□□□□□ -0.1
COL8A1-201ENST00000261037 FKBP4Q02790 459 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL8A1-201ENST00000261037 CCDC173Q0VFZ6 552 aa14.4□□□□□ -0.1
COL8A1-201ENST00000261037 RABEP1Q15276 862 aa14.4□□□□□ -0.1
COL8A1-201ENST00000261037 CCAR1Q8IX12 1150 aaKnown RBP14.4□□□□□ -0.1
COL8A1-201ENST00000261037 GNL3LQ9NVN8 582 aaKnown RBP14.4□□□□□ -0.1
COL8A1-201ENST00000261037 CYP46A1Q9Y6A2 500 aa14.4□□□□□ -0.1
COL8A1-201ENST00000261037 SUPT6HQ7KZ85 1726 aaKnown RBP14.4□□□□□ -0.1
COL8A1-201ENST00000261037 FILIP1LQ4L180 1135 aa14.39□□□□□ -0.11
COL8A1-201ENST00000261037 CCDC85AQ96PX6 553 aaPredicted RBP14.39□□□□□ -0.11
COL8A1-201ENST00000261037 AACSQ86V21 672 aa14.39□□□□□ -0.11
COL8A1-201ENST00000261037 PIBF1Q8WXW3 757 aa14.39□□□□□ -0.11
COL8A1-201ENST00000261037 SMARCE1Q969G3 411 aa14.39□□□□□ -0.11
COL8A1-201ENST00000261037 BICDL1Q6ZP65 573 aa14.38□□□□□ -0.11
COL8A1-201ENST00000261037 SERPINC1P01008 464 aa14.38□□□□□ -0.11
COL8A1-201ENST00000261037 SRCIN1Q9C0H9 1055 aa14.38□□□□□ -0.11
COL8A1-201ENST00000261037 CCT4P50991 539 aaKnown RBP14.38□□□□□ -0.11
COL8A1-201ENST00000261037 SYCP1Q15431 976 aa14.37□□□□□ -0.11
COL8A1-201ENST00000261037 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
COL8A1-201ENST00000261037 BTBD11A6QL63 1104 aa14.37□□□□□ -0.11
COL8A1-201ENST00000261037 ME1P48163 572 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 CWC27Q6UX04 472 aaKnown RBP14.36□□□□□ -0.11
COL8A1-201ENST00000261037 TANGO6Q9C0B7 1094 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 SPG7Q9UQ90 795 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 NBPF8Q3BBV2 869 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 IL1RAPL2Q9NP60 686 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 MIS18AQ9NYP9 233 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 MBD3O95983 291 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 PIP4K2BP78356 416 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 RBM10P98175 930 aaKnown RBP14.36□□□□□ -0.11
COL8A1-201ENST00000261037 CCDC57Q2TAC2 916 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 WWC2Q6AWC2 1192 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
COL8A1-201ENST00000261037 PDCP20941 246 aa14.35□□□□□ -0.11
COL8A1-201ENST00000261037 MPHOSPH8Q99549 860 aa14.35□□□□□ -0.11
COL8A1-201ENST00000261037 PAF1Q8N7H5 531 aa14.35□□□□□ -0.11
COL8A1-201ENST00000261037 SLC26A8Q96RN1 970 aa14.35□□□□□ -0.11
COL8A1-201ENST00000261037 ERBINQ96RT1 1412 aa14.35□□□□□ -0.11
COL8A1-201ENST00000261037 SCAPERQ9BY12 1400 aa14.35□□□□□ -0.11
COL8A1-201ENST00000261037 MCM2P49736 904 aa14.35□□□□□ -0.11
COL8A1-201ENST00000261037 EPRSP07814 1512 aaKnown RBP14.35□□□□□ -0.11
COL8A1-201ENST00000261037 NACAP1Q9BZK3 213 aa14.34□□□□□ -0.11
COL8A1-201ENST00000261037 NUTM1Q86Y26 1132 aa14.34□□□□□ -0.11
COL8A1-201ENST00000261037 FAM177A1Q8N128 213 aaPredicted RBP14.34□□□□□ -0.11
COL8A1-201ENST00000261037 K7ELQ4 463 aaPredicted RBP14.34□□□□□ -0.11
COL8A1-201ENST00000261037 SRGAP3O43295 1099 aa14.34□□□□□ -0.11
COL8A1-201ENST00000261037 CHD1LQ86WJ1 897 aa14.34□□□□□ -0.11
COL8A1-201ENST00000261037 HFM1A2PYH4 1435 aa14.34□□□□□ -0.11
COL8A1-201ENST00000261037 MVPQ14764 893 aaKnown RBP14.34□□□□□ -0.11
COL8A1-201ENST00000261037 TRIM22Q8IYM9 498 aa14.34□□□□□ -0.11
COL8A1-201ENST00000261037 PDRG1Q9NUG6 133 aa14.34□□□□□ -0.11
COL8A1-201ENST00000261037 PDE3AQ14432 1141 aa14.33□□□□□ -0.11
COL8A1-201ENST00000261037 JAKMIP1Q96N16 626 aaKnown RBP14.33□□□□□ -0.11
COL8A1-201ENST00000261037 CDK13Q14004 1512 aaKnown RBP14.33□□□□□ -0.12
COL8A1-201ENST00000261037 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
COL8A1-201ENST00000261037 MAP7D2Q96T17 732 aa14.33□□□□□ -0.12
COL8A1-201ENST00000261037 MAGI1Q96QZ7 1491 aaPredicted RBP14.33□□□□□ -0.12
COL8A1-201ENST00000261037 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.12
COL8A1-201ENST00000261037 RAI14Q9P0K7 980 aa14.33□□□□□ -0.12
COL8A1-201ENST00000261037 TDO2P48775 406 aa14.32□□□□□ -0.12
COL8A1-201ENST00000261037 NOM1Q5C9Z4 860 aaKnown RBP14.32□□□□□ -0.12
COL8A1-201ENST00000261037 ATF7IPQ6VMQ6 1270 aa14.32□□□□□ -0.12
COL8A1-201ENST00000261037 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
COL8A1-201ENST00000261037 DAPK1P53355 1430 aa14.32□□□□□ -0.12
COL8A1-201ENST00000261037 ERCC4Q92889 916 aaPredicted RBP14.32□□□□□ -0.12
COL8A1-201ENST00000261037 SOGA3Q5TF21 947 aa14.32□□□□□ -0.12
COL8A1-201ENST00000261037 ZSCAN29Q8IWY8 852 aaPredicted RBP14.32□□□□□ -0.12
COL8A1-201ENST00000261037 PDCL3Q9H2J4 239 aa14.32□□□□□ -0.12
COL8A1-201ENST00000261037 DEF6Q9H4E7 631 aa14.32□□□□□ -0.12
COL8A1-201ENST00000261037 MYO6Q9UM54 1294 aa14.32□□□□□ -0.12
COL8A1-201ENST00000261037 KIAA1107Q9UPP5 1409 aa14.32□□□□□ -0.12
COL8A1-201ENST00000261037 PNISRQ8TF01 805 aaKnown RBP14.32□□□□□ -0.12
COL8A1-201ENST00000261037 AXDND1Q5T1B0 1012 aaPredicted RBP14.32□□□□□ -0.12
COL8A1-201ENST00000261037 SSBP05455 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
COL8A1-201ENST00000261037 SEPT11Q9NVA2 429 aaKnown RBP14.31□□□□□ -0.12
COL8A1-201ENST00000261037 H0YHG0 523 aa14.31□□□□□ -0.12
COL8A1-201ENST00000261037 ANKRD1Q15327 319 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms