RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 NEFMP07197 916 aa22.09■■□□□ 1.13
HLA-F-216ENST00000259951 SOS2Q07890 1332 aaPredicted RBP22.08■■□□□ 1.13
HLA-F-216ENST00000259951 MAPK8IP3Q9UPT6 1336 aa22.08■■□□□ 1.13
HLA-F-216ENST00000259951 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.13
HLA-F-216ENST00000259951 GCP02774 474 aa22.08■■□□□ 1.13
HLA-F-216ENST00000259951 EIF4A2Q14240 407 aaKnown RBP22.08■■□□□ 1.13
HLA-F-216ENST00000259951 HSP90AB2PQ58FF8 381 aa22.08■■□□□ 1.13
HLA-F-216ENST00000259951 HOXC9P31274 260 aa22.06■■□□□ 1.12
HLA-F-216ENST00000259951 TCP11L2Q8N4U5 519 aa22.06■■□□□ 1.12
HLA-F-216ENST00000259951 MED1Q15648 1581 aaPredicted RBP22.06■■□□□ 1.12
HLA-F-216ENST00000259951 PLEKHF1Q96S99 279 aa22.06■■□□□ 1.12
HLA-F-216ENST00000259951 RGPD1P0DJD0 1748 aa22.05■■□□□ 1.12
HLA-F-216ENST00000259951 IP6K1Q92551 441 aa22.05■■□□□ 1.12
HLA-F-216ENST00000259951 RSPH6AQ9H0K4 717 aa22.04■■□□□ 1.12
HLA-F-216ENST00000259951 ROBO1Q9Y6N7 1651 aa22.03■■□□□ 1.12
HLA-F-216ENST00000259951 ARHGEF25Q86VW2 580 aa22.02■■□□□ 1.12
HLA-F-216ENST00000259951 ZNF521Q96K83 1311 aa22.02■■□□□ 1.12
HLA-F-216ENST00000259951 CRYBG1Q9Y4K1 1723 aa22.02■■□□□ 1.12
HLA-F-216ENST00000259951 PRKAR2BP31323 418 aa22.02■■□□□ 1.11
HLA-F-216ENST00000259951 CCDC27Q2M243 656 aa22.02■■□□□ 1.11
HLA-F-216ENST00000259951 HMOX1P09601 288 aa22.01■■□□□ 1.11
HLA-F-216ENST00000259951 GOLGA2Q08379 1002 aa22■■□□□ 1.11
HLA-F-216ENST00000259951 AHDC1Q5TGY3 1603 aaPredicted RBP21.99■■□□□ 1.11
HLA-F-216ENST00000259951 HSPA1LP34931 641 aa21.98■■□□□ 1.11
HLA-F-216ENST00000259951 ZBTB7CA1YPR0 619 aa21.98■■□□□ 1.11
HLA-F-216ENST00000259951 PLEKHG5O94827 1062 aa21.98■■□□□ 1.11
HLA-F-216ENST00000259951 TMPOP42166 694 aaKnown RBP21.98■■□□□ 1.11
HLA-F-216ENST00000259951 SULT6B1Q6IMI4 303 aa21.98■■□□□ 1.11
HLA-F-216ENST00000259951 ABCC6O95255 1503 aa21.98■■□□□ 1.11
HLA-F-216ENST00000259951 IGSF1Q8N6C5 1336 aa21.97■■□□□ 1.11
HLA-F-216ENST00000259951 NEUROD2Q15784 382 aa21.97■■□□□ 1.11
HLA-F-216ENST00000259951 WWC1Q8IX03 1113 aa21.97■■□□□ 1.11
HLA-F-216ENST00000259951 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
HLA-F-216ENST00000259951 RRP7AQ9Y3A4 280 aaKnown RBP21.96■■□□□ 1.11
HLA-F-216ENST00000259951 WDR63Q8IWG1 891 aa21.95■■□□□ 1.1
HLA-F-216ENST00000259951 KDRP35968 1356 aa21.95■■□□□ 1.1
HLA-F-216ENST00000259951 EYA1Q99502 592 aa21.95■■□□□ 1.1
HLA-F-216ENST00000259951 E9PSI1 815 aa21.94■■□□□ 1.1
HLA-F-216ENST00000259951 ZC3H6P61129 1189 aaKnown RBP21.94■■□□□ 1.1
HLA-F-216ENST00000259951 NFE2L2Q16236 605 aa21.94■■□□□ 1.1
HLA-F-216ENST00000259951 LRRC59Q96AG4 307 aaKnown RBP21.94■■□□□ 1.1
HLA-F-216ENST00000259951 CDCA7LQ96GN5 454 aa21.94■■□□□ 1.1
HLA-F-216ENST00000259951 CPDO75976 1380 aa21.94■■□□□ 1.1
HLA-F-216ENST00000259951 RIPK4P57078 832 aa21.93■■□□□ 1.1
HLA-F-216ENST00000259951 LTV1Q96GA3 475 aaPredicted RBP21.93■■□□□ 1.1
HLA-F-216ENST00000259951 ABCA3Q99758 1704 aa21.93■■□□□ 1.1
HLA-F-216ENST00000259951 CABLES1Q8TDN4 633 aa21.92■■□□□ 1.1
HLA-F-216ENST00000259951 RGPD5Q99666 1765 aa21.92■■□□□ 1.1
HLA-F-216ENST00000259951 SLFN5Q08AF3 891 aa21.91■■□□□ 1.1
HLA-F-216ENST00000259951 AEBP1Q8IUX7 1158 aa21.91■■□□□ 1.1
HLA-F-216ENST00000259951 PHACTR3Q96KR7 559 aa21.91■■□□□ 1.1
HLA-F-216ENST00000259951 COL18A1P39060 1754 aa21.91■■□□□ 1.1
HLA-F-216ENST00000259951 HAP1P54257 671 aaPredicted RBP21.91■■□□□ 1.1
HLA-F-216ENST00000259951 LMOD3Q0VAK6 560 aa21.91■■□□□ 1.1
HLA-F-216ENST00000259951 DLG5Q8TDM6 1919 aa21.9■■□□□ 1.1
HLA-F-216ENST00000259951 GTF3C3Q9Y5Q9 886 aa21.9■■□□□ 1.1
HLA-F-216ENST00000259951 PHLPP1O60346 1717 aa21.9■■□□□ 1.1
HLA-F-216ENST00000259951 FAM208AQ9UK61 1670 aaKnown RBP21.89■■□□□ 1.09
HLA-F-216ENST00000259951 TRMT2AQ8IZ69 625 aaKnown RBP21.88■■□□□ 1.09
HLA-F-216ENST00000259951 ANKRD24Q8TF21 1146 aa21.88■■□□□ 1.09
HLA-F-216ENST00000259951 KIAA0232Q92628 1395 aa21.88■■□□□ 1.09
HLA-F-216ENST00000259951 NEFLP07196 543 aa21.88■■□□□ 1.09
HLA-F-216ENST00000259951 DUSP27Q5VZP5 1158 aa21.88■■□□□ 1.09
HLA-F-216ENST00000259951 TRIM35Q9UPQ4 493 aa21.88■■□□□ 1.09
HLA-F-216ENST00000259951 RGPD2P0DJD1 1756 aa21.87■■□□□ 1.09
HLA-F-216ENST00000259951 CALD1Q05682 793 aaKnown RBP21.87■■□□□ 1.09
HLA-F-216ENST00000259951 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
HLA-F-216ENST00000259951 COL22A1Q8NFW1 1626 aaPredicted RBP21.87■■□□□ 1.09
HLA-F-216ENST00000259951 IL16Q14005 1332 aa21.87■■□□□ 1.09
HLA-F-216ENST00000259951 CAMTA1Q9Y6Y1 1673 aa21.86■■□□□ 1.09
HLA-F-216ENST00000259951 MYH16Q9H6N6 1097 aa21.85■■□□□ 1.09
HLA-F-216ENST00000259951 AXIN2Q9Y2T1 843 aa21.85■■□□□ 1.09
HLA-F-216ENST00000259951 NBPF6Q5VWK0 638 aa21.84■■□□□ 1.09
HLA-F-216ENST00000259951 NBPF4Q96M43 638 aa21.84■■□□□ 1.09
HLA-F-216ENST00000259951 PRDM11Q9NQV5 511 aa21.84■■□□□ 1.09
HLA-F-216ENST00000259951 ERBB3P21860 1342 aa21.84■■□□□ 1.09
HLA-F-216ENST00000259951 NCAPD2Q15021 1401 aa21.84■■□□□ 1.09
HLA-F-216ENST00000259951 COL16A1Q07092 1604 aaPredicted RBP21.84■■□□□ 1.09
HLA-F-216ENST00000259951 GAS2L2Q8NHY3 880 aa21.84■■□□□ 1.09
HLA-F-216ENST00000259951 SPINK5Q9NQ38 1064 aaPredicted RBP21.82■■□□□ 1.08
HLA-F-216ENST00000259951 RCAN3Q9UKA8 241 aa21.82■■□□□ 1.08
HLA-F-216ENST00000259951 CHRNA2Q15822 529 aa21.81■■□□□ 1.08
HLA-F-216ENST00000259951 LMO7Q8WWI1 1683 aa21.81■■□□□ 1.08
HLA-F-216ENST00000259951 USHBP1Q8N6Y0 703 aa21.8■■□□□ 1.08
HLA-F-216ENST00000259951 CSB-PGBD3P0DP91 1061 aa21.79■■□□□ 1.08
HLA-F-216ENST00000259951 HTATSF1O43719 755 aaKnown RBP21.77■■□□□ 1.08
HLA-F-216ENST00000259951 MTHFSDQ2M296 383 aaKnown RBP21.77■■□□□ 1.08
HLA-F-216ENST00000259951 NLRP2Q9NX02 1062 aa21.77■■□□□ 1.07
HLA-F-216ENST00000259951 RNF123Q5XPI4 1314 aa21.76■■□□□ 1.07
HLA-F-216ENST00000259951 AMOTQ4VCS5 1084 aa21.76■■□□□ 1.07
HLA-F-216ENST00000259951 RTF1Q92541 710 aaKnown RBP21.76■■□□□ 1.07
HLA-F-216ENST00000259951 COL14A1Q05707 1796 aaKnown RBP21.75■■□□□ 1.07
HLA-F-216ENST00000259951 PLEKHG2Q9H7P9 1386 aa21.75■■□□□ 1.07
HLA-F-216ENST00000259951 GNAI1P63096 354 aa21.75■■□□□ 1.07
HLA-F-216ENST00000259951 PLEKHO1Q53GL0 409 aaPredicted RBP21.75■■□□□ 1.07
HLA-F-216ENST00000259951 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
HLA-F-216ENST00000259951 COL5A2P05997 1499 aaPredicted RBP21.73■■□□□ 1.07
HLA-F-216ENST00000259951 WDR17Q8IZU2 1322 aa21.73■■□□□ 1.07
HLA-F-216ENST00000259951 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
HLA-F-216ENST00000259951 GNAT3A8MTJ3 354 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms