RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 CSPP1Q1MSJ5 1256 aa18.38■□□□□ 0.53
RIPK1-201ENST00000259808 NCKAP5LQ9HCH0 1330 aa18.37■□□□□ 0.53
RIPK1-201ENST00000259808 LRRCC1Q9C099 1032 aa18.37■□□□□ 0.53
RIPK1-201ENST00000259808 TSPYL6Q8N831 410 aa18.37■□□□□ 0.53
RIPK1-201ENST00000259808 FMNL2Q96PY5 1086 aa18.37■□□□□ 0.53
RIPK1-201ENST00000259808 CTTNBP2Q8WZ74 1663 aa18.37■□□□□ 0.53
RIPK1-201ENST00000259808 CCAR2Q8N163 923 aaKnown RBP18.37■□□□□ 0.53
RIPK1-201ENST00000259808 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
RIPK1-201ENST00000259808 PRAG1Q86YV5 1406 aa18.36■□□□□ 0.53
RIPK1-201ENST00000259808 SYCE3A1L190 88 aa18.36■□□□□ 0.53
RIPK1-201ENST00000259808 DTNBO60941 627 aa18.36■□□□□ 0.53
RIPK1-201ENST00000259808 TBC1D9Q6ZT07 1266 aa18.36■□□□□ 0.53
RIPK1-201ENST00000259808 TBC1D32Q96NH3 1257 aa18.36■□□□□ 0.53
RIPK1-201ENST00000259808 KIAA0556O60303 1618 aa18.36■□□□□ 0.53
RIPK1-201ENST00000259808 FYB1O15117 783 aa18.36■□□□□ 0.53
RIPK1-201ENST00000259808 RAPGEF4Q8WZA2 1011 aa18.36■□□□□ 0.53
RIPK1-201ENST00000259808 EIF4G3O43432 1585 aaKnown RBP18.35■□□□□ 0.53
RIPK1-201ENST00000259808 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
RIPK1-201ENST00000259808 CCDC85AQ96PX6 553 aaPredicted RBP18.35■□□□□ 0.53
RIPK1-201ENST00000259808 AEBP1Q8IUX7 1158 aa18.34■□□□□ 0.53
RIPK1-201ENST00000259808 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
RIPK1-201ENST00000259808 PES1O00541 588 aaKnown RBP18.34■□□□□ 0.53
RIPK1-201ENST00000259808 PZPP20742 1482 aa18.34■□□□□ 0.53
RIPK1-201ENST00000259808 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
RIPK1-201ENST00000259808 GTF2E1P29083 439 aaPredicted RBP18.34■□□□□ 0.53
RIPK1-201ENST00000259808 GAS2L2Q8NHY3 880 aa18.34■□□□□ 0.53
RIPK1-201ENST00000259808 RALGAPBQ86X10 1494 aa18.33■□□□□ 0.53
RIPK1-201ENST00000259808 WASHC4Q2M389 1173 aa18.33■□□□□ 0.53
RIPK1-201ENST00000259808 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.53
RIPK1-201ENST00000259808 C14orf93Q9H972 538 aaKnown RBP18.33■□□□□ 0.52
RIPK1-201ENST00000259808 ATP2B1P20020 1258 aa18.33■□□□□ 0.52
RIPK1-201ENST00000259808 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.52
RIPK1-201ENST00000259808 IFT57Q9NWB7 429 aa18.33■□□□□ 0.52
RIPK1-201ENST00000259808 CPLX1O14810 134 aa18.32■□□□□ 0.52
RIPK1-201ENST00000259808 DDX58O95786 925 aaKnown RBP18.32■□□□□ 0.52
RIPK1-201ENST00000259808 CNTROBQ8N137 903 aa18.32■□□□□ 0.52
RIPK1-201ENST00000259808 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
RIPK1-201ENST00000259808 SRCIN1Q9C0H9 1055 aa18.32■□□□□ 0.52
RIPK1-201ENST00000259808 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
RIPK1-201ENST00000259808 ZC3H6P61129 1189 aaKnown RBP18.32■□□□□ 0.52
RIPK1-201ENST00000259808 C8orf58Q8NAV2 365 aa18.32■□□□□ 0.52
RIPK1-201ENST00000259808 RBM27Q9P2N5 1060 aaKnown RBP18.31■□□□□ 0.52
RIPK1-201ENST00000259808 ASXL2Q76L83 1435 aa18.31■□□□□ 0.52
RIPK1-201ENST00000259808 EVA1CP58658 441 aa18.31■□□□□ 0.52
RIPK1-201ENST00000259808 HSP90AB2PQ58FF8 381 aa18.31■□□□□ 0.52
RIPK1-201ENST00000259808 PLCH2O75038 1416 aa18.3■□□□□ 0.52
RIPK1-201ENST00000259808 ATAD2Q6PL18 1390 aa18.3■□□□□ 0.52
RIPK1-201ENST00000259808 MEIS3Q99687 375 aa18.3■□□□□ 0.52
RIPK1-201ENST00000259808 RNF20Q5VTR2 975 aa18.3■□□□□ 0.52
RIPK1-201ENST00000259808 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
RIPK1-201ENST00000259808 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.28■□□□□ 0.52
RIPK1-201ENST00000259808 LRRFIP2Q9Y608 721 aaKnown RBP18.28■□□□□ 0.52
RIPK1-201ENST00000259808 NINLQ9Y2I6 1382 aa18.28■□□□□ 0.52
RIPK1-201ENST00000259808 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
RIPK1-201ENST00000259808 CHMP4CQ96CF2 233 aa18.28■□□□□ 0.52
RIPK1-201ENST00000259808 JAKMIP1Q96N16 626 aaKnown RBP18.28■□□□□ 0.52
RIPK1-201ENST00000259808 SASS6Q6UVJ0 657 aa18.27■□□□□ 0.52
RIPK1-201ENST00000259808 TRIM5Q9C035 493 aa18.27■□□□□ 0.52
RIPK1-201ENST00000259808 XRCC6P12956 609 aaKnown RBP eCLIP18.27■□□□□ 0.52
RIPK1-201ENST00000259808 AACSQ86V21 672 aa18.27■□□□□ 0.52
RIPK1-201ENST00000259808 RPAP2Q8IXW5 612 aaPredicted RBP18.27■□□□□ 0.52
RIPK1-201ENST00000259808 SPG7Q9UQ90 795 aa18.27■□□□□ 0.52
RIPK1-201ENST00000259808 TCOF1Q13428 1488 aaKnown RBP18.27■□□□□ 0.52
RIPK1-201ENST00000259808 TSPY26PQ9H489 355 aa18.27■□□□□ 0.52
RIPK1-201ENST00000259808 KDM6BO15054 1643 aa18.27■□□□□ 0.51
RIPK1-201ENST00000259808 SDF4Q9BRK5 362 aa18.27■□□□□ 0.51
RIPK1-201ENST00000259808 ABCA5Q8WWZ7 1642 aa18.26■□□□□ 0.51
RIPK1-201ENST00000259808 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
RIPK1-201ENST00000259808 DDX11Q96FC9 970 aa18.26■□□□□ 0.51
RIPK1-201ENST00000259808 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
RIPK1-201ENST00000259808 MTMR7Q9Y216 660 aa18.26■□□□□ 0.51
RIPK1-201ENST00000259808 KIF3AQ9Y496 699 aa18.26■□□□□ 0.51
RIPK1-201ENST00000259808 TEX14Q8IWB6 1497 aa18.26■□□□□ 0.51
RIPK1-201ENST00000259808 CFAP43Q8NDM7 1665 aa18.26■□□□□ 0.51
RIPK1-201ENST00000259808 PDE4CQ08493 712 aa18.26■□□□□ 0.51
RIPK1-201ENST00000259808 TAF7Q15545 349 aaPredicted RBP18.26■□□□□ 0.51
RIPK1-201ENST00000259808 CFAP65Q6ZU64 1925 aaKnown RBP18.25■□□□□ 0.51
RIPK1-201ENST00000259808 RPGRIP1LQ68CZ1 1315 aa18.25■□□□□ 0.51
RIPK1-201ENST00000259808 CAMK4Q16566 473 aa18.25■□□□□ 0.51
RIPK1-201ENST00000259808 MPRIPQ6WCQ1 1025 aa18.25■□□□□ 0.51
RIPK1-201ENST00000259808 MX1P20591 662 aa18.24■□□□□ 0.51
RIPK1-201ENST00000259808 CCDC83Q8IWF9 413 aa18.24■□□□□ 0.51
RIPK1-201ENST00000259808 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.24■□□□□ 0.51
RIPK1-201ENST00000259808 FOXO3O43524 673 aa18.24■□□□□ 0.51
RIPK1-201ENST00000259808 MBD3O95983 291 aa18.24■□□□□ 0.51
RIPK1-201ENST00000259808 TPM4P67936 248 aa18.24■□□□□ 0.51
RIPK1-201ENST00000259808 NUP160Q12769 1436 aa18.24■□□□□ 0.51
RIPK1-201ENST00000259808 TCEANC2Q96MN5 208 aa18.23■□□□□ 0.51
RIPK1-201ENST00000259808 CCDC8Q9H0W5 538 aaPredicted RBP18.23■□□□□ 0.51
RIPK1-201ENST00000259808 CASTP20810 708 aaKnown RBP18.23■□□□□ 0.51
RIPK1-201ENST00000259808 CCDC173Q0VFZ6 552 aa18.23■□□□□ 0.51
RIPK1-201ENST00000259808 LARP1BQ659C4 914 aaKnown RBP18.23■□□□□ 0.51
RIPK1-201ENST00000259808 HOMER1Q86YM7 354 aa18.23■□□□□ 0.51
RIPK1-201ENST00000259808 BOLA2Q9H3K6 86 aa18.23■□□□□ 0.51
RIPK1-201ENST00000259808 FAM135AQ9P2D6 1515 aa18.23■□□□□ 0.51
RIPK1-201ENST00000259808 WASLO00401 505 aaPredicted RBP18.23■□□□□ 0.51
RIPK1-201ENST00000259808 NFXL1Q6ZNB6 911 aa18.23■□□□□ 0.51
RIPK1-201ENST00000259808 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
RIPK1-201ENST00000259808 OTUD7AQ8TE49 926 aaPredicted RBP18.22■□□□□ 0.51
RIPK1-201ENST00000259808 STRN4Q9NRL3 753 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms