RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 CWC22Q9HCG8 908 aaKnown RBP15.98■□□□□ 0.15
ALPK3-201ENST00000258888 ZFYVE27Q5T4F4 411 aa15.98■□□□□ 0.15
ALPK3-201ENST00000258888 HSP90AB2PQ58FF8 381 aa15.97■□□□□ 0.15
ALPK3-201ENST00000258888 ZNF530Q6P9A1 599 aaPredicted RBP15.97■□□□□ 0.15
ALPK3-201ENST00000258888 STK11IPQ8N1F8 1099 aa15.97■□□□□ 0.15
ALPK3-201ENST00000258888 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
ALPK3-201ENST00000258888 CCP110O43303 1012 aa15.97■□□□□ 0.15
ALPK3-201ENST00000258888 CDK5RAP3Q96JB5 506 aa15.97■□□□□ 0.15
ALPK3-201ENST00000258888 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
ALPK3-201ENST00000258888 MAGEC2Q9UBF1 373 aaPredicted RBP15.97■□□□□ 0.15
ALPK3-201ENST00000258888 SRCIN1Q9C0H9 1055 aa15.97■□□□□ 0.15
ALPK3-201ENST00000258888 TXLNAP40222 546 aa15.96■□□□□ 0.15
ALPK3-201ENST00000258888 FILIP1LQ4L180 1135 aa15.96■□□□□ 0.15
ALPK3-201ENST00000258888 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
ALPK3-201ENST00000258888 AACSQ86V21 672 aa15.96■□□□□ 0.15
ALPK3-201ENST00000258888 SMARCE1Q969G3 411 aa15.96■□□□□ 0.15
ALPK3-201ENST00000258888 CNNM1Q9NRU3 951 aa15.96■□□□□ 0.15
ALPK3-201ENST00000258888 JMYQ8N9B5 988 aa15.96■□□□□ 0.14
ALPK3-201ENST00000258888 SERPINC1P01008 464 aa15.95■□□□□ 0.14
ALPK3-201ENST00000258888 AEBP1Q8IUX7 1158 aa15.95■□□□□ 0.14
ALPK3-201ENST00000258888 SKIDA1Q1XH10 827 aa15.95■□□□□ 0.14
ALPK3-201ENST00000258888 KLHL34Q8N239 644 aa15.95■□□□□ 0.14
ALPK3-201ENST00000258888 KRT85P78386 507 aa15.95■□□□□ 0.14
ALPK3-201ENST00000258888 SLC3A2P08195 630 aaKnown RBP15.95■□□□□ 0.14
ALPK3-201ENST00000258888 LARP1BQ659C4 914 aaKnown RBP15.95■□□□□ 0.14
ALPK3-201ENST00000258888 DAPK1P53355 1430 aa15.95■□□□□ 0.14
ALPK3-201ENST00000258888 STRN4Q9NRL3 753 aa15.95■□□□□ 0.14
ALPK3-201ENST00000258888 CWC15Q9P013 229 aaKnown RBP15.95■□□□□ 0.14
ALPK3-201ENST00000258888 RRS1Q15050 365 aaKnown RBP15.94■□□□□ 0.14
ALPK3-201ENST00000258888 H0YHG0 523 aa15.94■□□□□ 0.14
ALPK3-201ENST00000258888 CCDC158Q5M9N0 1113 aa15.94■□□□□ 0.14
ALPK3-201ENST00000258888 ERCC4Q92889 916 aaPredicted RBP15.94■□□□□ 0.14
ALPK3-201ENST00000258888 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
ALPK3-201ENST00000258888 ANKRD1Q15327 319 aa15.94■□□□□ 0.14
ALPK3-201ENST00000258888 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.94■□□□□ 0.14
ALPK3-201ENST00000258888 AXDND1Q5T1B0 1012 aaPredicted RBP15.93■□□□□ 0.14
ALPK3-201ENST00000258888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.93■□□□□ 0.14
ALPK3-201ENST00000258888 MCM4P33991 863 aa15.93■□□□□ 0.14
ALPK3-201ENST00000258888 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
ALPK3-201ENST00000258888 KRT18P05783 430 aaKnown RBP15.93■□□□□ 0.14
ALPK3-201ENST00000258888 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
ALPK3-201ENST00000258888 MYL6BP14649 208 aa15.93■□□□□ 0.14
ALPK3-201ENST00000258888 CWC27Q6UX04 472 aaKnown RBP15.93■□□□□ 0.14
ALPK3-201ENST00000258888 JAKMIP1Q96N16 626 aaKnown RBP15.93■□□□□ 0.14
ALPK3-201ENST00000258888 SRGAP3O43295 1099 aa15.93■□□□□ 0.14
ALPK3-201ENST00000258888 TMEM57Q8N5G2 664 aa15.92■□□□□ 0.14
ALPK3-201ENST00000258888 PDRG1Q9NUG6 133 aa15.92■□□□□ 0.14
ALPK3-201ENST00000258888 TRIM22Q8IYM9 498 aa15.92■□□□□ 0.14
ALPK3-201ENST00000258888 CCDC112Q8NEF3 446 aa15.92■□□□□ 0.14
ALPK3-201ENST00000258888 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
ALPK3-201ENST00000258888 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
ALPK3-201ENST00000258888 UQCRHLA0A096LP55 91 aa15.91■□□□□ 0.14
ALPK3-201ENST00000258888 UQCRHP07919 91 aa15.91■□□□□ 0.14
ALPK3-201ENST00000258888 IL1RAPL2Q9NP60 686 aa15.91■□□□□ 0.14
ALPK3-201ENST00000258888 PLEKHH2Q8IVE3 1493 aa15.91■□□□□ 0.14
ALPK3-201ENST00000258888 TATP17735 454 aaPredicted RBP15.91■□□□□ 0.14
ALPK3-201ENST00000258888 PPFIBP1Q86W92 1011 aa15.91■□□□□ 0.14
ALPK3-201ENST00000258888 GNL3LQ9NVN8 582 aaKnown RBP15.91■□□□□ 0.14
ALPK3-201ENST00000258888 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
ALPK3-201ENST00000258888 FAM177A1Q8N128 213 aaPredicted RBP15.91■□□□□ 0.14
ALPK3-201ENST00000258888 SKAP1Q86WV1 359 aa15.9■□□□□ 0.14
ALPK3-201ENST00000258888 BLOC1S2Q6QNY1 142 aa15.9■□□□□ 0.14
ALPK3-201ENST00000258888 NUP133Q8WUM0 1156 aa15.9■□□□□ 0.14
ALPK3-201ENST00000258888 ATP2B2Q01814 1243 aa15.9■□□□□ 0.14
ALPK3-201ENST00000258888 PIP4K2AP48426 406 aaPredicted RBP15.9■□□□□ 0.14
ALPK3-201ENST00000258888 DCTN1Q14203 1278 aa15.9■□□□□ 0.14
ALPK3-201ENST00000258888 CCAR1Q8IX12 1150 aaKnown RBP15.9■□□□□ 0.14
ALPK3-201ENST00000258888 ZNHIT6Q9NWK9 470 aaKnown RBP15.9■□□□□ 0.14
ALPK3-201ENST00000258888 CIZ1Q9ULV3 898 aaPredicted RBP15.9■□□□□ 0.14
ALPK3-201ENST00000258888 THUMPD2Q9BTF0 503 aaKnown RBP15.9■□□□□ 0.14
ALPK3-201ENST00000258888 CDK13Q14004 1512 aaKnown RBP15.9■□□□□ 0.14
ALPK3-201ENST00000258888 FKBP4Q02790 459 aaKnown RBP eCLIP15.89■□□□□ 0.13
ALPK3-201ENST00000258888 CABP4P57796 275 aa15.89■□□□□ 0.13
ALPK3-201ENST00000258888 MYO6Q9UM54 1294 aa15.89■□□□□ 0.13
ALPK3-201ENST00000258888 TSPYL1Q9H0U9 437 aa15.89■□□□□ 0.13
ALPK3-201ENST00000258888 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
ALPK3-201ENST00000258888 CCDC69A6NI79 296 aa15.89■□□□□ 0.13
ALPK3-201ENST00000258888 CASTP20810 708 aaKnown RBP15.89■□□□□ 0.13
ALPK3-201ENST00000258888 SLFN5Q08AF3 891 aa15.89■□□□□ 0.13
ALPK3-201ENST00000258888 NACAP1Q9BZK3 213 aa15.89■□□□□ 0.13
ALPK3-201ENST00000258888 SYCE3A1L190 88 aa15.88■□□□□ 0.13
ALPK3-201ENST00000258888 NCAPD3P42695 1498 aa15.88■□□□□ 0.13
ALPK3-201ENST00000258888 PROSER2Q86WR7 435 aaPredicted RBP15.88■□□□□ 0.13
ALPK3-201ENST00000258888 SPINK5Q9NQ38 1064 aaPredicted RBP15.88■□□□□ 0.13
ALPK3-201ENST00000258888 MIS18AQ9NYP9 233 aa15.88■□□□□ 0.13
ALPK3-201ENST00000258888 ESPNB1AK53 854 aa15.88■□□□□ 0.13
ALPK3-201ENST00000258888 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
ALPK3-201ENST00000258888 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
ALPK3-201ENST00000258888 CEP57L1Q8IYX8 460 aa15.87■□□□□ 0.13
ALPK3-201ENST00000258888 NUP62CLQ9H1M0 184 aa15.87■□□□□ 0.13
ALPK3-201ENST00000258888 NUTM1Q86Y26 1132 aa15.87■□□□□ 0.13
ALPK3-201ENST00000258888 EXOC6BQ9Y2D4 811 aa15.87■□□□□ 0.13
ALPK3-201ENST00000258888 TMPOP42166 694 aaKnown RBP15.87■□□□□ 0.13
ALPK3-201ENST00000258888 STIM1Q13586 685 aa15.87■□□□□ 0.13
ALPK3-201ENST00000258888 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
ALPK3-201ENST00000258888 LEKR1Q6ZMV7 388 aa15.87■□□□□ 0.13
ALPK3-201ENST00000258888 TMEM132AQ24JP5 1023 aa15.86■□□□□ 0.13
ALPK3-201ENST00000258888 DDX11Q96FC9 970 aa15.86■□□□□ 0.13
ALPK3-201ENST00000258888 NESP48681 1621 aa15.86■□□□□ 0.13
ALPK3-201ENST00000258888 SMARCA5O60264 1052 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms