RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 CLASRPQ8N2M8 674 aaKnown RBP20.34■□□□□ 0.85
SORT1-201ENST00000256637 CCDC69A6NI79 296 aa20.33■□□□□ 0.85
SORT1-201ENST00000256637 HSP90AB4PQ58FF6 505 aa20.33■□□□□ 0.85
SORT1-201ENST00000256637 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.85
SORT1-201ENST00000256637 VTI1AQ96AJ9 217 aa20.33■□□□□ 0.85
SORT1-201ENST00000256637 F8W031 263 aaPredicted RBP20.33■□□□□ 0.84
SORT1-201ENST00000256637 POLR3DP05423 398 aaPredicted RBP20.33■□□□□ 0.84
SORT1-201ENST00000256637 FGD6Q6ZV73 1430 aa20.32■□□□□ 0.84
SORT1-201ENST00000256637 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
SORT1-201ENST00000256637 DDX49Q9Y6V7 483 aaKnown RBP20.32■□□□□ 0.84
SORT1-201ENST00000256637 LIG1P18858 919 aa20.32■□□□□ 0.84
SORT1-201ENST00000256637 ZNF652Q9Y2D9 606 aa20.32■□□□□ 0.84
SORT1-201ENST00000256637 METTL24Q5JXM2 366 aa20.32■□□□□ 0.84
SORT1-201ENST00000256637 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.32■□□□□ 0.842e-6■□□□□ 9.9
SORT1-201ENST00000256637 GOLGA6L3A6NEY3 463 aa20.32■□□□□ 0.84
SORT1-201ENST00000256637 TOM1O60784 492 aa20.31■□□□□ 0.84
SORT1-201ENST00000256637 SSBP05455 408 aaKnown RBP eCLIP20.31■□□□□ 0.84
SORT1-201ENST00000256637 ANKRD20A12PQ8NF67 263 aa20.31■□□□□ 0.84
SORT1-201ENST00000256637 PTMSP20962 102 aa20.31■□□□□ 0.84
SORT1-201ENST00000256637 HOOK1Q9UJC3 728 aaKnown RBP20.31■□□□□ 0.84
SORT1-201ENST00000256637 REC8O95072 547 aa20.3■□□□□ 0.84
SORT1-201ENST00000256637 INTS3Q68E01 1043 aaKnown RBP20.3■□□□□ 0.84
SORT1-201ENST00000256637 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
SORT1-201ENST00000256637 MINDY4BA8MYZ0 360 aa20.3■□□□□ 0.84
SORT1-201ENST00000256637 AACSQ86V21 672 aa20.3■□□□□ 0.84
SORT1-201ENST00000256637 TCP11L2Q8N4U5 519 aa20.3■□□□□ 0.84
SORT1-201ENST00000256637 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
SORT1-201ENST00000256637 CENPQQ7L2Z9 268 aaPredicted RBP20.29■□□□□ 0.84
SORT1-201ENST00000256637 ZNF692Q9BU19 519 aaPredicted RBP20.28■□□□□ 0.84
SORT1-201ENST00000256637 WDHD1O75717 1129 aaPredicted RBP20.28■□□□□ 0.84
SORT1-201ENST00000256637 DEKP35659 375 aaKnown RBP20.28■□□□□ 0.84
SORT1-201ENST00000256637 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
SORT1-201ENST00000256637 EPRSP07814 1512 aaKnown RBP20.28■□□□□ 0.84
SORT1-201ENST00000256637 GNAT3A8MTJ3 354 aa20.27■□□□□ 0.84
SORT1-201ENST00000256637 GNAI2P04899 355 aa20.27■□□□□ 0.84
SORT1-201ENST00000256637 KIF21BO75037 1637 aa20.27■□□□□ 0.83
SORT1-201ENST00000256637 LMTK3Q96Q04 1460 aa20.27■□□□□ 0.83
SORT1-201ENST00000256637 OFD1O75665 1012 aa20.27■□□□□ 0.83
SORT1-201ENST00000256637 DZIP1Q86YF9 867 aaKnown RBP20.26■□□□□ 0.83
SORT1-201ENST00000256637 ZNF408Q9H9D4 720 aa20.26■□□□□ 0.83
SORT1-201ENST00000256637 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
SORT1-201ENST00000256637 TRMT112Q9UI30 125 aaKnown RBP20.26■□□□□ 0.83
SORT1-201ENST00000256637 PIP4K2AP48426 406 aaPredicted RBP20.25■□□□□ 0.83
SORT1-201ENST00000256637 SOGA3Q5TF21 947 aa20.25■□□□□ 0.83
SORT1-201ENST00000256637 ZBTB3Q9H5J0 574 aa20.25■□□□□ 0.83
SORT1-201ENST00000256637 CDCA7LQ96GN5 454 aa20.25■□□□□ 0.83
SORT1-201ENST00000256637 KIF7Q2M1P5 1343 aa20.24■□□□□ 0.83
SORT1-201ENST00000256637 NME9Q86XW9 330 aa20.24■□□□□ 0.83
SORT1-201ENST00000256637 IL1RAPL2Q9NP60 686 aa20.24■□□□□ 0.83
SORT1-201ENST00000256637 SEPT11Q9NVA2 429 aaKnown RBP20.23■□□□□ 0.83
SORT1-201ENST00000256637 HECW1Q76N89 1606 aa20.23■□□□□ 0.83
SORT1-201ENST00000256637 IPO7O95373 1038 aaKnown RBP20.23■□□□□ 0.83
SORT1-201ENST00000256637 CAVIN4Q5BKX8 364 aa20.23■□□□□ 0.83
SORT1-201ENST00000256637 CCDC96Q2M329 555 aa20.23■□□□□ 0.83
SORT1-201ENST00000256637 SASS6Q6UVJ0 657 aa20.23■□□□□ 0.83
SORT1-201ENST00000256637 PDCL3Q9H2J4 239 aa20.23■□□□□ 0.83
SORT1-201ENST00000256637 LRRC9Q6ZRR7 1453 aa20.23■□□□□ 0.83
SORT1-201ENST00000256637 FMNL2Q96PY5 1086 aa20.22■□□□□ 0.83
SORT1-201ENST00000256637 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
SORT1-201ENST00000256637 TFCP2L1Q9NZI6 479 aa20.22■□□□□ 0.83
SORT1-201ENST00000256637 ATP6V1DQ9Y5K8 247 aa20.22■□□□□ 0.83
SORT1-201ENST00000256637 PPP2R1AP30153 589 aa20.22■□□□□ 0.83
SORT1-201ENST00000256637 ATP6V1AP38606 617 aa20.21■□□□□ 0.83
SORT1-201ENST00000256637 HOMER1Q86YM7 354 aa20.21■□□□□ 0.83
SORT1-201ENST00000256637 NACAP1Q9BZK3 213 aa20.21■□□□□ 0.83
SORT1-201ENST00000256637 SYCP1Q15431 976 aa20.21■□□□□ 0.83
SORT1-201ENST00000256637 NUTM1Q86Y26 1132 aa20.21■□□□□ 0.83
SORT1-201ENST00000256637 TANGO6Q9C0B7 1094 aa20.21■□□□□ 0.83
SORT1-201ENST00000256637 FBLN1P23142 703 aa20.21■□□□□ 0.83
SORT1-201ENST00000256637 ST5P78524 1137 aa20.21■□□□□ 0.83
SORT1-201ENST00000256637 CCDC97Q96F63 343 aaPredicted RBP20.21■□□□□ 0.83
SORT1-201ENST00000256637 MKNK2Q9HBH9 465 aa20.2■□□□□ 0.82
SORT1-201ENST00000256637 MSH6P52701 1360 aa20.2■□□□□ 0.82
SORT1-201ENST00000256637 GJA3Q9Y6H8 435 aa20.2■□□□□ 0.82
SORT1-201ENST00000256637 PODXL2Q9NZ53 605 aa20.2■□□□□ 0.82
SORT1-201ENST00000256637 OLFM4Q6UX06 510 aa20.19■□□□□ 0.82
SORT1-201ENST00000256637 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
SORT1-201ENST00000256637 CWC27Q6UX04 472 aaKnown RBP20.19■□□□□ 0.82
SORT1-201ENST00000256637 SYNJ1O43426 1573 aa20.19■□□□□ 0.82
SORT1-201ENST00000256637 KCNH5Q8NCM2 988 aa20.19■□□□□ 0.82
SORT1-201ENST00000256637 SRGAP3O43295 1099 aa20.19■□□□□ 0.82
SORT1-201ENST00000256637 ADGRL1O94910 1474 aa20.18■□□□□ 0.82
SORT1-201ENST00000256637 BIN2Q9UBW5 565 aaPredicted RBP20.18■□□□□ 0.82
SORT1-201ENST00000256637 FEZ1Q99689 392 aa20.18■□□□□ 0.82
SORT1-201ENST00000256637 SUPT6HQ7KZ85 1726 aaKnown RBP20.18■□□□□ 0.82
SORT1-201ENST00000256637 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
SORT1-201ENST00000256637 GNAI3P08754 354 aa20.18■□□□□ 0.82
SORT1-201ENST00000256637 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
SORT1-201ENST00000256637 PSMA5P28066 241 aa20.17■□□□□ 0.82
SORT1-201ENST00000256637 DHX8Q14562 1220 aaKnown RBP20.17■□□□□ 0.82
SORT1-201ENST00000256637 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
SORT1-201ENST00000256637 RIMBP2O15034 1052 aa20.17■□□□□ 0.82
SORT1-201ENST00000256637 NAIPQ13075 1403 aa20.17■□□□□ 0.82
SORT1-201ENST00000256637 CEP126Q9P2H0 1117 aa20.16■□□□□ 0.82
SORT1-201ENST00000256637 CCDC73Q6ZRK6 1079 aa20.16■□□□□ 0.82
SORT1-201ENST00000256637 VAT1LQ9HCJ6 419 aa20.16■□□□□ 0.82
SORT1-201ENST00000256637 CCDC70Q6NSX1 233 aa20.16■□□□□ 0.82
SORT1-201ENST00000256637 AIDAQ96BJ3 306 aa20.16■□□□□ 0.82
SORT1-201ENST00000256637 UBAC1Q9BSL1 405 aa20.16■□□□□ 0.82
SORT1-201ENST00000256637 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms