RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 CENPHQ9H3R5 247 aa12.09□□□□□ -0.47
TRPM1-201ENST00000256552 IVLP07476 585 aa12.09□□□□□ -0.47
TRPM1-201ENST00000256552 IFIT2P09913 472 aaKnown RBP12.09□□□□□ -0.47
TRPM1-201ENST00000256552 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
TRPM1-201ENST00000256552 LIG1P18858 919 aa12.09□□□□□ -0.47
TRPM1-201ENST00000256552 DUSP27Q5VZP5 1158 aa12.09□□□□□ -0.47
TRPM1-201ENST00000256552 SYNE3Q6ZMZ3 975 aa12.09□□□□□ -0.47
TRPM1-201ENST00000256552 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
TRPM1-201ENST00000256552 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
TRPM1-201ENST00000256552 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
TRPM1-201ENST00000256552 PLEKHH2Q8IVE3 1493 aa12.08□□□□□ -0.48
TRPM1-201ENST00000256552 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
TRPM1-201ENST00000256552 SERPINC1P01008 464 aa12.08□□□□□ -0.48
TRPM1-201ENST00000256552 CPLX1O14810 134 aa12.08□□□□□ -0.48
TRPM1-201ENST00000256552 WDR63Q8IWG1 891 aa12.08□□□□□ -0.48
TRPM1-201ENST00000256552 TTC12Q9H892 705 aaPredicted RBP12.08□□□□□ -0.48
TRPM1-201ENST00000256552 FSD2A1L4K1 749 aa12.08□□□□□ -0.48
TRPM1-201ENST00000256552 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRPM1-201ENST00000256552 LMAN1P49257 510 aa12.08□□□□□ -0.48
TRPM1-201ENST00000256552 LRCH2Q5VUJ6 765 aa12.08□□□□□ -0.48
TRPM1-201ENST00000256552 IBSPP21815 317 aaPredicted RBP12.07□□□□□ -0.48
TRPM1-201ENST00000256552 MTHFSP49914 203 aa12.07□□□□□ -0.48
TRPM1-201ENST00000256552 GDPD2Q9HCC8 539 aa12.07□□□□□ -0.48
TRPM1-201ENST00000256552 NKTRP30414 1462 aaKnown RBP12.07□□□□□ -0.48
TRPM1-201ENST00000256552 PSMA5P28066 241 aa12.07□□□□□ -0.48
TRPM1-201ENST00000256552 CEP135Q66GS9 1140 aa12.07□□□□□ -0.48
TRPM1-201ENST00000256552 DRC1Q96MC2 740 aa12.07□□□□□ -0.48
TRPM1-201ENST00000256552 SEC24BO95487 1268 aa12.07□□□□□ -0.48
TRPM1-201ENST00000256552 SPATA32Q96LK8 384 aa12.07□□□□□ -0.48
TRPM1-201ENST00000256552 MRVI1Q9Y6F6 885 aa12.07□□□□□ -0.48
TRPM1-201ENST00000256552 NCOA2Q15596 1464 aa12.07□□□□□ -0.48
TRPM1-201ENST00000256552 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
TRPM1-201ENST00000256552 LARP1BQ659C4 914 aaKnown RBP12.06□□□□□ -0.48
TRPM1-201ENST00000256552 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-201ENST00000256552 URI1O94763 535 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-201ENST00000256552 TRIM29Q14134 588 aa12.06□□□□□ -0.48
TRPM1-201ENST00000256552 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRPM1-201ENST00000256552 ZNF644Q9H582 1327 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-201ENST00000256552 RARSP54136 660 aaKnown RBP12.06□□□□□ -0.48
TRPM1-201ENST00000256552 HCLS1P14317 486 aaPredicted RBP12.05□□□□□ -0.48
TRPM1-201ENST00000256552 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
TRPM1-201ENST00000256552 CNTROBQ8N137 903 aa12.05□□□□□ -0.48
TRPM1-201ENST00000256552 TMEM57Q8N5G2 664 aa12.05□□□□□ -0.48
TRPM1-201ENST00000256552 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
TRPM1-201ENST00000256552 ERICH3Q5RHP9 1530 aa12.05□□□□□ -0.48
TRPM1-201ENST00000256552 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
TRPM1-201ENST00000256552 ZNF397Q8NF99 534 aaPredicted RBP12.05□□□□□ -0.48
TRPM1-201ENST00000256552 TMX1Q9H3N1 280 aa12.05□□□□□ -0.48
TRPM1-201ENST00000256552 NAP1L1P55209 391 aaKnown RBP12.05□□□□□ -0.48
TRPM1-201ENST00000256552 LRRCC1Q9C099 1032 aa12.05□□□□□ -0.48
TRPM1-201ENST00000256552 BRMS1Q9HCU9 246 aa12.05□□□□□ -0.48
TRPM1-201ENST00000256552 NF2P35240 595 aa12.04□□□□□ -0.48
TRPM1-201ENST00000256552 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
TRPM1-201ENST00000256552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRPM1-201ENST00000256552 SMARCA2P51531 1590 aa12.04□□□□□ -0.48
TRPM1-201ENST00000256552 CPLX2Q6PUV4 134 aaKnown RBP12.04□□□□□ -0.48
TRPM1-201ENST00000256552 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
TRPM1-201ENST00000256552 PPP1R9BQ96SB3 815 aa12.04□□□□□ -0.48
TRPM1-201ENST00000256552 UPF3BQ9BZI7 483 aaKnown RBP12.04□□□□□ -0.48
TRPM1-201ENST00000256552 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
TRPM1-201ENST00000256552 GOLGA6L10A6NI86 522 aa12.03□□□□□ -0.48
TRPM1-201ENST00000256552 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRPM1-201ENST00000256552 ZNF396Q96N95 335 aaPredicted RBP12.03□□□□□ -0.48
TRPM1-201ENST00000256552 EVC2Q86UK5 1308 aa12.03□□□□□ -0.48
TRPM1-201ENST00000256552 MARCH6O60337 910 aa12.03□□□□□ -0.48
TRPM1-201ENST00000256552 CYP46A1Q9Y6A2 500 aa12.03□□□□□ -0.48
TRPM1-201ENST00000256552 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
TRPM1-201ENST00000256552 PSMD1Q99460 953 aa12.03□□□□□ -0.48
TRPM1-201ENST00000256552 SHTN1A0MZ66 631 aa12.03□□□□□ -0.48
TRPM1-201ENST00000256552 MAP2K2P36507 400 aa12.03□□□□□ -0.48
TRPM1-201ENST00000256552 SMARCE1Q969G3 411 aa12.03□□□□□ -0.48
TRPM1-201ENST00000256552 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRPM1-201ENST00000256552 V9GYY5 206 aaPredicted RBP12.03□□□□□ -0.48
TRPM1-201ENST00000256552 HMOX1P09601 288 aa12.02□□□□□ -0.48
TRPM1-201ENST00000256552 ATP6V1AP38606 617 aa12.02□□□□□ -0.48
TRPM1-201ENST00000256552 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.48
TRPM1-201ENST00000256552 SNX21Q969T3 373 aa12.02□□□□□ -0.48
TRPM1-201ENST00000256552 TMEM51Q9NW97 253 aa12.02□□□□□ -0.48
TRPM1-201ENST00000256552 TDRD9Q8NDG6 1382 aaKnown RBP12.02□□□□□ -0.48
TRPM1-201ENST00000256552 ME1P48163 572 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 TBC1D9Q6ZT07 1266 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 CBFA2T2O43439 604 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 NEMFO60524 1076 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 STK3Q13188 491 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 GGT6Q6P531 493 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 CKAP2LQ8IYA6 745 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 ANKRD18AQ8IVF6 992 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 RBSNQ9H1K0 784 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 TIAM1Q13009 1591 aa12.02□□□□□ -0.49
TRPM1-201ENST00000256552 CASKIN1Q8WXD9 1431 aa12.01□□□□□ -0.49
TRPM1-201ENST00000256552 ERLIN2O94905 339 aa12.01□□□□□ -0.49
TRPM1-201ENST00000256552 ARID4AP29374 1257 aaPredicted RBP12.01□□□□□ -0.49
TRPM1-201ENST00000256552 STK38Q15208 465 aa12.01□□□□□ -0.49
TRPM1-201ENST00000256552 SMC5Q8IY18 1101 aa12.01□□□□□ -0.49
TRPM1-201ENST00000256552 BRPF1P55201 1214 aaPredicted RBP12.01□□□□□ -0.49
TRPM1-201ENST00000256552 GBP3Q9H0R5 595 aa12.01□□□□□ -0.49
TRPM1-201ENST00000256552 LRRFIP2Q9Y608 721 aaKnown RBP12.01□□□□□ -0.49
TRPM1-201ENST00000256552 KRBA2Q6ZNG9 492 aa12.01□□□□□ -0.49
TRPM1-201ENST00000256552 FYCO1Q9BQS8 1478 aa12.01□□□□□ -0.49
TRPM1-201ENST00000256552 CASQ1P31415 396 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms