RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 PHF23Q9BUL5 403 aaPredicted RBP15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 CABP2Q9NPB3 220 aa15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 POLR3GO15318 223 aaPredicted RBP15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 KRT85P78386 507 aa15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 BMS1Q14692 1282 aaKnown RBP15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 TICAM2Q86XR7 235 aa15.59■□□□□ 0.09
PCDHGA3-201ENST00000253812 FAM193AP78312 1265 aa15.58■□□□□ 0.09
PCDHGA3-201ENST00000253812 PDE3AQ14432 1141 aa15.58■□□□□ 0.09
PCDHGA3-201ENST00000253812 HSP90AB4PQ58FF6 505 aa15.58■□□□□ 0.09
PCDHGA3-201ENST00000253812 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.09
PCDHGA3-201ENST00000253812 C11orf95C9JLR9 678 aaPredicted RBP15.58■□□□□ 0.08
PCDHGA3-201ENST00000253812 LUC7LQ9NQ29 371 aaKnown RBP15.58■□□□□ 0.08
PCDHGA3-201ENST00000253812 ZNF396Q96N95 335 aaPredicted RBP15.58■□□□□ 0.08
PCDHGA3-201ENST00000253812 MAP9Q49MG5 647 aa15.57■□□□□ 0.08
PCDHGA3-201ENST00000253812 KRT222Q8N1A0 295 aa15.57■□□□□ 0.08
PCDHGA3-201ENST00000253812 PCF11O94913 1555 aaKnown RBP15.57■□□□□ 0.08
PCDHGA3-201ENST00000253812 MEX3CQ5U5Q3 659 aaKnown RBP15.57■□□□□ 0.08
PCDHGA3-201ENST00000253812 DHX37Q8IY37 1157 aaKnown RBP15.57■□□□□ 0.08
PCDHGA3-201ENST00000253812 CEP57L1Q8IYX8 460 aa15.57■□□□□ 0.08
PCDHGA3-201ENST00000253812 TXLNBQ8N3L3 684 aa15.57■□□□□ 0.08
PCDHGA3-201ENST00000253812 GGNBP2Q9H3C7 697 aa15.57■□□□□ 0.08
PCDHGA3-201ENST00000253812 FBXO3Q9UK99 471 aa15.57■□□□□ 0.08
PCDHGA3-201ENST00000253812 CNTLNQ9NXG0 1405 aa15.56■□□□□ 0.08
PCDHGA3-201ENST00000253812 PDIA4P13667 645 aaKnown RBP15.56■□□□□ 0.08
PCDHGA3-201ENST00000253812 SPDYE4A6NLX3 237 aa15.56■□□□□ 0.08
PCDHGA3-201ENST00000253812 GRIN2AQ12879 1464 aa15.56■□□□□ 0.08
PCDHGA3-201ENST00000253812 PLEKHH2Q8IVE3 1493 aa15.56■□□□□ 0.08
PCDHGA3-201ENST00000253812 NAIPQ13075 1403 aa15.56■□□□□ 0.08
PCDHGA3-201ENST00000253812 SYCE3A1L190 88 aa15.56■□□□□ 0.08
PCDHGA3-201ENST00000253812 TNNT1P13805 278 aa15.56■□□□□ 0.08
PCDHGA3-201ENST00000253812 ENOX2Q16206 610 aaKnown RBP15.56■□□□□ 0.08
PCDHGA3-201ENST00000253812 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
PCDHGA3-201ENST00000253812 IBSPP21815 317 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA3-201ENST00000253812 CLASRPQ8N2M8 674 aaKnown RBP15.55■□□□□ 0.08
PCDHGA3-201ENST00000253812 TAX1BP1Q86VP1 789 aa15.55■□□□□ 0.08
PCDHGA3-201ENST00000253812 FOSBP53539 338 aa15.55■□□□□ 0.08
PCDHGA3-201ENST00000253812 NUP62CLQ9H1M0 184 aa15.55■□□□□ 0.08
PCDHGA3-201ENST00000253812 ARHGEF11O15085 1522 aa15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 LRRFIP2Q9Y608 721 aaKnown RBP15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 SUPT6HQ7KZ85 1726 aaKnown RBP15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 MCM3P25205 808 aa15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 JMYQ8N9B5 988 aa15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 EPS15P42566 896 aa15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 BRPF1P55201 1214 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 DACH1Q9UI36 760 aa15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 STK38Q15208 465 aa15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 RBM33Q96EV2 1170 aaKnown RBP15.54■□□□□ 0.08
PCDHGA3-201ENST00000253812 EZRP15311 586 aaKnown RBP15.53■□□□□ 0.08
PCDHGA3-201ENST00000253812 SFPQP23246 707 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHGA3-201ENST00000253812 SEPT7Q16181 437 aaKnown RBP15.53■□□□□ 0.08
PCDHGA3-201ENST00000253812 NFXL1Q6ZNB6 911 aa15.53■□□□□ 0.08
PCDHGA3-201ENST00000253812 SMAP1Q8IYB5 467 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA3-201ENST00000253812 RUNDC1Q96C34 613 aa15.53■□□□□ 0.08
PCDHGA3-201ENST00000253812 CUL7Q14999 1698 aa15.53■□□□□ 0.08
PCDHGA3-201ENST00000253812 ZSCAN12O43309 604 aa15.53■□□□□ 0.08
PCDHGA3-201ENST00000253812 MAGEC2Q9UBF1 373 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA3-201ENST00000253812 RALYLQ86SE5 291 aaKnown RBP15.52■□□□□ 0.08
PCDHGA3-201ENST00000253812 ANKRD18AQ8IVF6 992 aa15.52■□□□□ 0.08
PCDHGA3-201ENST00000253812 NF2P35240 595 aa15.52■□□□□ 0.08
PCDHGA3-201ENST00000253812 ARHGAP29Q52LW3 1261 aa15.52■□□□□ 0.08
PCDHGA3-201ENST00000253812 SMARCC1Q92922 1105 aaPredicted RBP15.52■□□□□ 0.07
PCDHGA3-201ENST00000253812 GCC1Q96CN9 775 aa15.52■□□□□ 0.07
PCDHGA3-201ENST00000253812 IVLP07476 585 aa15.52■□□□□ 0.07
PCDHGA3-201ENST00000253812 LMAN1P49257 510 aa15.52■□□□□ 0.07
PCDHGA3-201ENST00000253812 URI1O94763 535 aaPredicted RBP15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 NEMFO60524 1076 aa15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 UPF3BQ9BZI7 483 aaKnown RBP15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 C9orf78Q9NZ63 289 aaPredicted RBP15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 MAP3K11Q16584 847 aa15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 LUZP1Q86V48 1076 aa15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 PLCD3Q8N3E9 789 aa15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 KIF20AO95235 890 aa15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 SSR1P43307 286 aaKnown RBP15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 RNF187Q5TA31 235 aaPredicted RBP15.51■□□□□ 0.07
PCDHGA3-201ENST00000253812 SLC26A8Q96RN1 970 aa15.5■□□□□ 0.07
PCDHGA3-201ENST00000253812 NINLQ9Y2I6 1382 aa15.5■□□□□ 0.07
PCDHGA3-201ENST00000253812 RIPK4P57078 832 aa15.5■□□□□ 0.07
PCDHGA3-201ENST00000253812 PSME1Q06323 249 aa15.5■□□□□ 0.07
PCDHGA3-201ENST00000253812 G3BP1Q13283 466 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCDHGA3-201ENST00000253812 ERICH2A1L162 156 aa15.5■□□□□ 0.07
PCDHGA3-201ENST00000253812 CCDC148Q8NFR7 591 aa15.5■□□□□ 0.07
PCDHGA3-201ENST00000253812 CCDC94Q9BW85 323 aaPredicted RBP15.5■□□□□ 0.07
PCDHGA3-201ENST00000253812 TRIM34Q9BYJ4 488 aa15.5■□□□□ 0.07
PCDHGA3-201ENST00000253812 TDO2P48775 406 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 XBP1P17861 261 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 ZFYVE27Q5T4F4 411 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 GOLGA6L10A0A0M3HER8 536 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 SMTNL1A8MU46 457 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 TXNDC2Q86VQ3 553 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 BRMS1Q9HCU9 246 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 AKNAQ7Z591 1439 aa15.49■□□□□ 0.07
PCDHGA3-201ENST00000253812 POTEB2H3BUK9 544 aa15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 PAXBP1Q9Y5B6 917 aa15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 MAP2K1Q02750 393 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms