RNA–Protein interactions for RNA: ENST00000249363.3

LRRC4-201, Transcript of leucine rich repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC4, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4-201ENST00000249363 CPDO75976 1380 aa12.28□□□□□ -0.44
LRRC4-201ENST00000249363 FLT4P35916 1363 aa12.27□□□□□ -0.44
LRRC4-201ENST00000249363 FAM9BQ8IZU0 186 aa12.26□□□□□ -0.45
LRRC4-201ENST00000249363 ARHGEF25Q86VW2 580 aa12.26□□□□□ -0.45
LRRC4-201ENST00000249363 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
LRRC4-201ENST00000249363 NUTM2GQ5VZR2 741 aa12.26□□□□□ -0.45
LRRC4-201ENST00000249363 PLEKHF1Q96S99 279 aa12.26□□□□□ -0.45
LRRC4-201ENST00000249363 GCP02774 474 aa12.25□□□□□ -0.45
LRRC4-201ENST00000249363 KCNH5Q8NCM2 988 aa12.25□□□□□ -0.45
LRRC4-201ENST00000249363 CERKQ8TCT0 537 aa12.25□□□□□ -0.45
LRRC4-201ENST00000249363 NRAPQ86VF7 1730 aa12.25□□□□□ -0.45
LRRC4-201ENST00000249363 HOXC9P31274 260 aa12.24□□□□□ -0.45
LRRC4-201ENST00000249363 KDRP35968 1356 aa12.24□□□□□ -0.45
LRRC4-201ENST00000249363 COL14A1Q05707 1796 aaKnown RBP12.24□□□□□ -0.45
LRRC4-201ENST00000249363 EIF4A2Q14240 407 aaKnown RBP12.24□□□□□ -0.45
LRRC4-201ENST00000249363 CFAP53Q96M91 514 aa12.24□□□□□ -0.45
LRRC4-201ENST00000249363 PLCH1Q4KWH8 1693 aa12.23□□□□□ -0.45
LRRC4-201ENST00000249363 ZBED9Q6R2W3 1325 aa12.23□□□□□ -0.45
LRRC4-201ENST00000249363 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
LRRC4-201ENST00000249363 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
LRRC4-201ENST00000249363 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
LRRC4-201ENST00000249363 IP6K1Q92551 441 aa12.23□□□□□ -0.45
LRRC4-201ENST00000249363 VIRMAQ69YN4 1812 aaKnown RBP12.23□□□□□ -0.45
LRRC4-201ENST00000249363 WNK3Q9BYP7 1800 aa12.23□□□□□ -0.45
LRRC4-201ENST00000249363 TOM1O60784 492 aa12.22□□□□□ -0.45
LRRC4-201ENST00000249363 RSPH6AQ9H0K4 717 aa12.22□□□□□ -0.45
LRRC4-201ENST00000249363 IGSF1Q8N6C5 1336 aa12.21□□□□□ -0.45
LRRC4-201ENST00000249363 NWD2Q9ULI1 1742 aa12.21□□□□□ -0.46
LRRC4-201ENST00000249363 ADAMTS7Q9UKP4 1686 aa12.21□□□□□ -0.46
LRRC4-201ENST00000249363 LRRC37A3O60309 1634 aa12.2□□□□□ -0.46
LRRC4-201ENST00000249363 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
LRRC4-201ENST00000249363 PKD1L3Q7Z443 1732 aa12.2□□□□□ -0.46
LRRC4-201ENST00000249363 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
LRRC4-201ENST00000249363 WDR43Q15061 677 aaKnown RBP eCLIP12.2□□□□□ -0.46
LRRC4-201ENST00000249363 YTHDC1Q96MU7 727 aaKnown RBP12.2□□□□□ -0.46
LRRC4-201ENST00000249363 AXIN2Q9Y2T1 843 aa12.2□□□□□ -0.46
LRRC4-201ENST00000249363 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
LRRC4-201ENST00000249363 LRRC59Q96AG4 307 aaKnown RBP12.18□□□□□ -0.46
LRRC4-201ENST00000249363 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
LRRC4-201ENST00000249363 FCHSD2O94868 740 aa12.18□□□□□ -0.46
LRRC4-201ENST00000249363 CABLES1Q8TDN4 633 aa12.18□□□□□ -0.46
LRRC4-201ENST00000249363 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
LRRC4-201ENST00000249363 RUNDC1Q96C34 613 aa12.18□□□□□ -0.46
LRRC4-201ENST00000249363 COL5A2P05997 1499 aaPredicted RBP12.17□□□□□ -0.46
LRRC4-201ENST00000249363 EYA1Q99502 592 aa12.17□□□□□ -0.46
LRRC4-201ENST00000249363 NUDCQ9Y266 331 aa12.17□□□□□ -0.46
LRRC4-201ENST00000249363 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
LRRC4-201ENST00000249363 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.17□□□□□ -0.46
LRRC4-201ENST00000249363 UBAP1LF5GYI3 381 aa12.16□□□□□ -0.46
LRRC4-201ENST00000249363 PLEKHG2Q9H7P9 1386 aa12.16□□□□□ -0.46
LRRC4-201ENST00000249363 PARP4Q9UKK3 1724 aaKnown RBP12.16□□□□□ -0.46
LRRC4-201ENST00000249363 SOX12O15370 315 aa12.16□□□□□ -0.46
LRRC4-201ENST00000249363 PPM1GO15355 546 aaPredicted RBP12.16□□□□□ -0.46
LRRC4-201ENST00000249363 AMPHP49418 695 aa12.16□□□□□ -0.46
LRRC4-201ENST00000249363 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
LRRC4-201ENST00000249363 ERBB3P21860 1342 aa12.16□□□□□ -0.46
LRRC4-201ENST00000249363 SIPA1L3O60292 1781 aaPredicted RBP12.16□□□□□ -0.46
LRRC4-201ENST00000249363 U2AF1L5P0DN76 240 aaPredicted RBP12.15□□□□□ -0.46
LRRC4-201ENST00000249363 U2AF1Q01081 240 aaKnown RBP eCLIP12.15□□□□□ -0.46
LRRC4-201ENST00000249363 CCDC146Q8IYE0 955 aa12.15□□□□□ -0.46
LRRC4-201ENST00000249363 NGEFQ8N5V2 710 aa12.15□□□□□ -0.46
LRRC4-201ENST00000249363 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
LRRC4-201ENST00000249363 APAF1O14727 1248 aa12.14□□□□□ -0.47
LRRC4-201ENST00000249363 TRMT2AQ8IZ69 625 aaKnown RBP12.14□□□□□ -0.47
LRRC4-201ENST00000249363 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
LRRC4-201ENST00000249363 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
LRRC4-201ENST00000249363 LRP6O75581 1613 aa12.13□□□□□ -0.47
LRRC4-201ENST00000249363 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
LRRC4-201ENST00000249363 NBPF6Q5VWK0 638 aa12.13□□□□□ -0.47
LRRC4-201ENST00000249363 TCP11L2Q8N4U5 519 aa12.13□□□□□ -0.47
LRRC4-201ENST00000249363 NBPF4Q96M43 638 aa12.13□□□□□ -0.47
LRRC4-201ENST00000249363 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
LRRC4-201ENST00000249363 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
LRRC4-201ENST00000249363 SLIT2O94813 1529 aa12.13□□□□□ -0.47
LRRC4-201ENST00000249363 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
LRRC4-201ENST00000249363 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
LRRC4-201ENST00000249363 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
LRRC4-201ENST00000249363 SCN11AQ9UI33 1791 aa12.12□□□□□ -0.47
LRRC4-201ENST00000249363 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
LRRC4-201ENST00000249363 HMOX1P09601 288 aa12.11□□□□□ -0.47
LRRC4-201ENST00000249363 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
LRRC4-201ENST00000249363 JCADQ9P266 1359 aa12.11□□□□□ -0.47
LRRC4-201ENST00000249363 TMPOP42166 694 aaKnown RBP12.11□□□□□ -0.47
LRRC4-201ENST00000249363 SULT6B1Q6IMI4 303 aa12.11□□□□□ -0.47
LRRC4-201ENST00000249363 WWC1Q8IX03 1113 aa12.1□□□□□ -0.47
LRRC4-201ENST00000249363 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
LRRC4-201ENST00000249363 MEGF6O75095 1541 aa12.1□□□□□ -0.47
LRRC4-201ENST00000249363 PDE3BQ13370 1112 aa12.09□□□□□ -0.47
LRRC4-201ENST00000249363 CHRNA2Q15822 529 aa12.09□□□□□ -0.47
LRRC4-201ENST00000249363 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
LRRC4-201ENST00000249363 WDR17Q8IZU2 1322 aa12.09□□□□□ -0.47
LRRC4-201ENST00000249363 KDM3BQ7LBC6 1761 aa12.09□□□□□ -0.47
LRRC4-201ENST00000249363 DISP2A7MBM2 1401 aa12.09□□□□□ -0.47
LRRC4-201ENST00000249363 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
LRRC4-201ENST00000249363 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
LRRC4-201ENST00000249363 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
LRRC4-201ENST00000249363 SLFN5Q08AF3 891 aa12.07□□□□□ -0.48
LRRC4-201ENST00000249363 WDR63Q8IWG1 891 aa12.07□□□□□ -0.48
LRRC4-201ENST00000249363 CRB1P82279 1406 aa12.06□□□□□ -0.48
LRRC4-201ENST00000249363 CDCA7LQ96GN5 454 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms