RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 SMG6Q86US8 1419 aaKnown RBP20.63■□□□□ 0.89
ATP6V1F-201ENST00000249289 RRS1Q15050 365 aaKnown RBP20.63■□□□□ 0.89
ATP6V1F-201ENST00000249289 MAP2P11137 1827 aaKnown RBP20.62■□□□□ 0.89
ATP6V1F-201ENST00000249289 FLT4P35916 1363 aa20.62■□□□□ 0.89
ATP6V1F-201ENST00000249289 PEAK1Q9H792 1746 aa20.62■□□□□ 0.89
ATP6V1F-201ENST00000249289 FBLN1P23142 703 aa20.62■□□□□ 0.89
ATP6V1F-201ENST00000249289 TNNT2P45379 298 aaPredicted RBP20.62■□□□□ 0.89
ATP6V1F-201ENST00000249289 UNC5CLQ8IV45 518 aa20.62■□□□□ 0.89
ATP6V1F-201ENST00000249289 AMPHP49418 695 aa20.61■□□□□ 0.89
ATP6V1F-201ENST00000249289 RGPD5Q99666 1765 aa20.61■□□□□ 0.89
ATP6V1F-201ENST00000249289 IP6K1Q92551 441 aa20.6■□□□□ 0.89
ATP6V1F-201ENST00000249289 ATRNO75882 1429 aa20.6■□□□□ 0.89
ATP6V1F-201ENST00000249289 CDK12Q9NYV4 1490 aaPredicted RBP20.59■□□□□ 0.89
ATP6V1F-201ENST00000249289 HOXC9P31274 260 aa20.59■□□□□ 0.89
ATP6V1F-201ENST00000249289 CNGB1Q14028 1251 aaPredicted RBP20.59■□□□□ 0.89
ATP6V1F-201ENST00000249289 POLKQ9UBT6 870 aa20.59■□□□□ 0.89
ATP6V1F-201ENST00000249289 EMILIN1Q9Y6C2 1016 aa20.59■□□□□ 0.89
ATP6V1F-201ENST00000249289 PARD3Q8TEW0 1356 aa20.59■□□□□ 0.89
ATP6V1F-201ENST00000249289 FAM208AQ9UK61 1670 aaKnown RBP20.58■□□□□ 0.89
ATP6V1F-201ENST00000249289 RGS17Q9UGC6 210 aaPredicted RBP20.58■□□□□ 0.89
ATP6V1F-201ENST00000249289 TRPC5Q9UL62 973 aaPredicted RBP20.58■□□□□ 0.89
ATP6V1F-201ENST00000249289 AXIN2Q9Y2T1 843 aa20.58■□□□□ 0.89
ATP6V1F-201ENST00000249289 INSRP06213 1382 aa20.57■□□□□ 0.88
ATP6V1F-201ENST00000249289 ERBB3P21860 1342 aa20.56■□□□□ 0.88
ATP6V1F-201ENST00000249289 EVA1CP58658 441 aa20.56■□□□□ 0.88
ATP6V1F-201ENST00000249289 VPS72Q15906 364 aa20.56■□□□□ 0.88
ATP6V1F-201ENST00000249289 STRN4Q9NRL3 753 aa20.56■□□□□ 0.88
ATP6V1F-201ENST00000249289 WDR17Q8IZU2 1322 aa20.55■□□□□ 0.88
ATP6V1F-201ENST00000249289 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
ATP6V1F-201ENST00000249289 CRB1P82279 1406 aa20.54■□□□□ 0.88
ATP6V1F-201ENST00000249289 RALBP1Q15311 655 aa20.54■□□□□ 0.88
ATP6V1F-201ENST00000249289 QTRT2Q9H974 415 aaKnown RBP20.54■□□□□ 0.88
ATP6V1F-201ENST00000249289 GLI3P10071 1580 aa20.52■□□□□ 0.88
ATP6V1F-201ENST00000249289 CSB-PGBD3P0DP91 1061 aa20.52■□□□□ 0.88
ATP6V1F-201ENST00000249289 ANKRD24Q8TF21 1146 aa20.52■□□□□ 0.88
ATP6V1F-201ENST00000249289 CCDC9Q9Y3X0 531 aaKnown RBP20.52■□□□□ 0.88
ATP6V1F-201ENST00000249289 SPATA31A5Q5VU36 1347 aa20.52■□□□□ 0.87
ATP6V1F-201ENST00000249289 SPATA31A7Q8IWB4 1347 aa20.52■□□□□ 0.87
ATP6V1F-201ENST00000249289 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
ATP6V1F-201ENST00000249289 HSP90AB2PQ58FF8 381 aa20.51■□□□□ 0.87
ATP6V1F-201ENST00000249289 LARP1Q6PKG0 1096 aaKnown RBP20.51■□□□□ 0.87
ATP6V1F-201ENST00000249289 POTEAQ6S8J7 498 aa20.51■□□□□ 0.87
ATP6V1F-201ENST00000249289 MTHFSP49914 203 aa20.5■□□□□ 0.87
ATP6V1F-201ENST00000249289 RBM6P78332 1123 aaKnown RBP20.5■□□□□ 0.87
ATP6V1F-201ENST00000249289 TOM1L2Q6ZVM7 507 aa20.5■□□□□ 0.87
ATP6V1F-201ENST00000249289 GJD4Q96KN9 370 aaPredicted RBP20.5■□□□□ 0.87
ATP6V1F-201ENST00000249289 SPATA31A1Q5TZJ5 1347 aa20.5■□□□□ 0.87
ATP6V1F-201ENST00000249289 LTV1Q96GA3 475 aaPredicted RBP20.49■□□□□ 0.87
ATP6V1F-201ENST00000249289 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
ATP6V1F-201ENST00000249289 RXRBP28702 533 aa20.47■□□□□ 0.87
ATP6V1F-201ENST00000249289 CARD10Q9BWT7 1032 aa20.47■□□□□ 0.87
ATP6V1F-201ENST00000249289 WNK3Q9BYP7 1800 aa20.47■□□□□ 0.87
ATP6V1F-201ENST00000249289 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
ATP6V1F-201ENST00000249289 COL3A1P02461 1466 aaPredicted RBP20.46■□□□□ 0.87
ATP6V1F-201ENST00000249289 NLRP2Q9NX02 1062 aa20.46■□□□□ 0.87
ATP6V1F-201ENST00000249289 THRAP3Q9Y2W1 955 aaKnown RBP20.46■□□□□ 0.87
ATP6V1F-201ENST00000249289 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
ATP6V1F-201ENST00000249289 TCP11L2Q8N4U5 519 aa20.45■□□□□ 0.86
ATP6V1F-201ENST00000249289 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
ATP6V1F-201ENST00000249289 EIF4A2Q14240 407 aaKnown RBP20.44■□□□□ 0.86
ATP6V1F-201ENST00000249289 USP35Q9P2H5 1018 aa20.44■□□□□ 0.86
ATP6V1F-201ENST00000249289 THSD7AQ9UPZ6 1657 aa20.44■□□□□ 0.86
ATP6V1F-201ENST00000249289 ANP32CO43423 234 aa20.43■□□□□ 0.86
ATP6V1F-201ENST00000249289 BARGINQ6ZT62 677 aa20.43■□□□□ 0.86
ATP6V1F-201ENST00000249289 NCAPD2Q15021 1401 aa20.43■□□□□ 0.86
ATP6V1F-201ENST00000249289 RGPD1P0DJD0 1748 aa20.42■□□□□ 0.86
ATP6V1F-201ENST00000249289 FAM98CQ17RN3 349 aaKnown RBP20.41■□□□□ 0.86
ATP6V1F-201ENST00000249289 NBPF6Q5VWK0 638 aa20.41■□□□□ 0.86
ATP6V1F-201ENST00000249289 NBPF4Q96M43 638 aa20.41■□□□□ 0.86
ATP6V1F-201ENST00000249289 RGS12O14924 1447 aa20.41■□□□□ 0.86
ATP6V1F-201ENST00000249289 DISP2A7MBM2 1401 aa20.4■□□□□ 0.86
ATP6V1F-201ENST00000249289 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
ATP6V1F-201ENST00000249289 CDCA7Q9BWT1 371 aaPredicted RBP20.4■□□□□ 0.86
ATP6V1F-201ENST00000249289 PARP4Q9UKK3 1724 aaKnown RBP20.4■□□□□ 0.86
ATP6V1F-201ENST00000249289 IGSF1Q8N6C5 1336 aa20.39■□□□□ 0.85
ATP6V1F-201ENST00000249289 ONECUT3O60422 494 aaPredicted RBP20.39■□□□□ 0.85
ATP6V1F-201ENST00000249289 IL13P35225 146 aa20.39■□□□□ 0.85
ATP6V1F-201ENST00000249289 EYA1Q99502 592 aa20.38■□□□□ 0.85
ATP6V1F-201ENST00000249289 LRRC37A3O60309 1634 aa20.38■□□□□ 0.85
ATP6V1F-201ENST00000249289 A0A0G2JS52 829 aa20.37■□□□□ 0.85
ATP6V1F-201ENST00000249289 MYT1Q01538 1121 aa20.37■□□□□ 0.85
ATP6V1F-201ENST00000249289 IL2RBP14784 551 aa20.36■□□□□ 0.85
ATP6V1F-201ENST00000249289 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
ATP6V1F-201ENST00000249289 SEPT12Q8IYM1 358 aa20.35■□□□□ 0.85
ATP6V1F-201ENST00000249289 MEGF6O75095 1541 aa20.35■□□□□ 0.85
ATP6V1F-201ENST00000249289 KDRP35968 1356 aa20.34■□□□□ 0.85
ATP6V1F-201ENST00000249289 PLEKHG2Q9H7P9 1386 aa20.34■□□□□ 0.85
ATP6V1F-201ENST00000249289 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
ATP6V1F-201ENST00000249289 OVOS2A0A0G2JMS6 1433 aa20.34■□□□□ 0.85
ATP6V1F-201ENST00000249289 TNS2Q63HR2 1409 aa20.34■□□□□ 0.85
ATP6V1F-201ENST00000249289 RAPGEF4Q8WZA2 1011 aa20.33■□□□□ 0.85
ATP6V1F-201ENST00000249289 BRWD3Q6RI45 1802 aa20.32■□□□□ 0.84
ATP6V1F-201ENST00000249289 U2SURPO15042 1029 aaKnown RBP20.31■□□□□ 0.84
ATP6V1F-201ENST00000249289 DIEXFQ68CQ4 756 aaKnown RBP20.31■□□□□ 0.84
ATP6V1F-201ENST00000249289 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
ATP6V1F-201ENST00000249289 TATP17735 454 aaPredicted RBP20.3■□□□□ 0.84
ATP6V1F-201ENST00000249289 DDB1Q16531 1140 aa20.3■□□□□ 0.84
ATP6V1F-201ENST00000249289 SULT6B1Q6IMI4 303 aa20.3■□□□□ 0.84
ATP6V1F-201ENST00000249289 AEBP1Q8IUX7 1158 aa20.29■□□□□ 0.84
ATP6V1F-201ENST00000249289 SHANK3Q9BYB0 1731 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms