RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
PMPCB-201ENST00000249269 COG6Q9Y2V7 657 aa18.61■□□□□ 0.57
PMPCB-201ENST00000249269 ABCA9Q8IUA7 1624 aa18.6■□□□□ 0.57
PMPCB-201ENST00000249269 HDAC1Q13547 482 aaPredicted RBP18.59■□□□□ 0.57
PMPCB-201ENST00000249269 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
PMPCB-201ENST00000249269 GOLGA6L3A6NEY3 463 aa18.58■□□□□ 0.57
PMPCB-201ENST00000249269 TBC1D2Q9BYX2 928 aa18.58■□□□□ 0.57
PMPCB-201ENST00000249269 MROH1Q8NDA8 1641 aa18.58■□□□□ 0.57
PMPCB-201ENST00000249269 DDX11L8A8MPP1 907 aa18.58■□□□□ 0.56
PMPCB-201ENST00000249269 PANK1Q8TE04 598 aa18.58■□□□□ 0.56
PMPCB-201ENST00000249269 RPGRIP1LQ68CZ1 1315 aa18.57■□□□□ 0.56
PMPCB-201ENST00000249269 MVPQ14764 893 aaKnown RBP18.57■□□□□ 0.56
PMPCB-201ENST00000249269 PDZRN3Q9UPQ7 1066 aa18.57■□□□□ 0.56
PMPCB-201ENST00000249269 MCM4P33991 863 aa18.57■□□□□ 0.56
PMPCB-201ENST00000249269 POGKQ9P215 609 aa18.57■□□□□ 0.56
PMPCB-201ENST00000249269 ABCC11Q96J66 1382 aa18.56■□□□□ 0.56
PMPCB-201ENST00000249269 SEC24BO95487 1268 aa18.56■□□□□ 0.56
PMPCB-201ENST00000249269 MORC1Q86VD1 984 aa18.56■□□□□ 0.56
PMPCB-201ENST00000249269 ZHX1Q9UKY1 873 aaPredicted RBP18.56■□□□□ 0.56
PMPCB-201ENST00000249269 CIZ1Q9ULV3 898 aaPredicted RBP18.56■□□□□ 0.56
PMPCB-201ENST00000249269 IL16Q14005 1332 aa18.56■□□□□ 0.56
PMPCB-201ENST00000249269 ZNF500O60304 480 aaPredicted RBP18.56■□□□□ 0.56
PMPCB-201ENST00000249269 MARCH6O60337 910 aa18.56■□□□□ 0.56
PMPCB-201ENST00000249269 MRE11P49959 708 aa18.56■□□□□ 0.56
PMPCB-201ENST00000249269 UTP14CQ5TAP6 766 aaKnown RBP18.56■□□□□ 0.56
PMPCB-201ENST00000249269 DNAJC14Q6Y2X3 702 aaPredicted RBP18.56■□□□□ 0.56
PMPCB-201ENST00000249269 DNTTIP2Q5QJE6 756 aaKnown RBP18.55■□□□□ 0.56
PMPCB-201ENST00000249269 ZKSCAN2Q63HK3 967 aa18.55■□□□□ 0.56
PMPCB-201ENST00000249269 NSD3Q9BZ95 1437 aa18.55■□□□□ 0.56
PMPCB-201ENST00000249269 NCOA3Q9Y6Q9 1424 aa18.55■□□□□ 0.56
PMPCB-201ENST00000249269 TPD52L2O43399 206 aaKnown RBP18.55■□□□□ 0.56
PMPCB-201ENST00000249269 TCP11L2Q8N4U5 519 aa18.55■□□□□ 0.56
PMPCB-201ENST00000249269 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
PMPCB-201ENST00000249269 CLCN1P35523 988 aa18.54■□□□□ 0.56
PMPCB-201ENST00000249269 EVI5LQ96CN4 794 aa18.54■□□□□ 0.56
PMPCB-201ENST00000249269 PCDHB15Q9Y5E8 787 aa18.54■□□□□ 0.56
PMPCB-201ENST00000249269 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
PMPCB-201ENST00000249269 QRICH2Q9H0J4 1663 aa18.54■□□□□ 0.56
PMPCB-201ENST00000249269 SNX21Q969T3 373 aa18.54■□□□□ 0.56
PMPCB-201ENST00000249269 FOXD4Q12950 439 aaPredicted RBP18.53■□□□□ 0.56
PMPCB-201ENST00000249269 KIF16BQ96L93 1317 aa18.53■□□□□ 0.56
PMPCB-201ENST00000249269 CCDC82Q8N4S0 544 aa18.52■□□□□ 0.56
PMPCB-201ENST00000249269 DDX19BQ9UMR2 479 aa18.52■□□□□ 0.56
PMPCB-201ENST00000249269 RPS6KL1Q9Y6S9 549 aa18.52■□□□□ 0.56
PMPCB-201ENST00000249269 RBM26Q5T8P6 1007 aaKnown RBP18.51■□□□□ 0.55
PMPCB-201ENST00000249269 PPLO60437 1756 aa18.51■□□□□ 0.55
PMPCB-201ENST00000249269 ADGRB1O14514 1584 aa18.51■□□□□ 0.55
PMPCB-201ENST00000249269 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
PMPCB-201ENST00000249269 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
PMPCB-201ENST00000249269 ZNF513Q8N8E2 541 aaPredicted RBP18.51■□□□□ 0.55
PMPCB-201ENST00000249269 C22orf23Q9BZE7 217 aa18.51■□□□□ 0.55
PMPCB-201ENST00000249269 PPME1Q9Y570 386 aa18.51■□□□□ 0.55
PMPCB-201ENST00000249269 PPRC1Q5VV67 1664 aaKnown RBP18.51■□□□□ 0.55
PMPCB-201ENST00000249269 TESPA1A2RU30 521 aaPredicted RBP18.5■□□□□ 0.55
PMPCB-201ENST00000249269 SKOR2Q2VWA4 1001 aaPredicted RBP18.5■□□□□ 0.55
PMPCB-201ENST00000249269 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.5■□□□□ 0.551e-6■■■■□ 23.9
PMPCB-201ENST00000249269 RBM27Q9P2N5 1060 aaKnown RBP18.5■□□□□ 0.55
PMPCB-201ENST00000249269 MED14O60244 1454 aa18.5■□□□□ 0.55
PMPCB-201ENST00000249269 TSPAN18Q96SJ8 248 aa18.49■□□□□ 0.55
PMPCB-201ENST00000249269 SLKQ9H2G2 1235 aaPredicted RBP18.49■□□□□ 0.55
PMPCB-201ENST00000249269 C14orf93Q9H972 538 aaKnown RBP18.49■□□□□ 0.55
PMPCB-201ENST00000249269 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
PMPCB-201ENST00000249269 ANKRD36BQ8N2N9 1353 aa18.49■□□□□ 0.55
PMPCB-201ENST00000249269 SMC5Q8IY18 1101 aa18.49■□□□□ 0.55
PMPCB-201ENST00000249269 PNNQ9H307 717 aaKnown RBP18.49■□□□□ 0.55
PMPCB-201ENST00000249269 GEMIN8Q9NWZ8 242 aaKnown RBP18.49■□□□□ 0.55
PMPCB-201ENST00000249269 ADGRF5Q8IZF2 1346 aa18.48■□□□□ 0.55
PMPCB-201ENST00000249269 HSCBQ8IWL3 235 aa18.48■□□□□ 0.55
PMPCB-201ENST00000249269 SDR16C5Q8N3Y7 309 aa18.48■□□□□ 0.55
PMPCB-201ENST00000249269 MTA3Q9BTC8 594 aa18.48■□□□□ 0.55
PMPCB-201ENST00000249269 YY1AP1Q9H869 796 aa18.47■□□□□ 0.55
PMPCB-201ENST00000249269 XRCC6P12956 609 aaKnown RBP eCLIP18.47■□□□□ 0.55
PMPCB-201ENST00000249269 MAP2K1Q02750 393 aaPredicted RBP18.47■□□□□ 0.55
PMPCB-201ENST00000249269 PRR29P0C7W0 189 aa18.46■□□□□ 0.55
PMPCB-201ENST00000249269 RLBP1P12271 317 aa18.46■□□□□ 0.55
PMPCB-201ENST00000249269 TAF3Q5VWG9 929 aa18.46■□□□□ 0.55
PMPCB-201ENST00000249269 SPRYD3Q8NCJ5 442 aa18.46■□□□□ 0.55
PMPCB-201ENST00000249269 DDIT3P35638 169 aa18.46■□□□□ 0.55
PMPCB-201ENST00000249269 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
PMPCB-201ENST00000249269 TRAK2O60296 914 aa18.45■□□□□ 0.54
PMPCB-201ENST00000249269 ARHGEF1Q92888 912 aaKnown RBP18.45■□□□□ 0.54
PMPCB-201ENST00000249269 GOLIM4O00461 696 aa18.45■□□□□ 0.54
PMPCB-201ENST00000249269 SSFA2P28290 1259 aa18.45■□□□□ 0.54
PMPCB-201ENST00000249269 TRAIPQ9BWF2 469 aa18.45■□□□□ 0.54
PMPCB-201ENST00000249269 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
PMPCB-201ENST00000249269 RRAGDQ9NQL2 400 aaPredicted RBP18.44■□□□□ 0.54
PMPCB-201ENST00000249269 SUGT1Q9Y2Z0 365 aa18.44■□□□□ 0.54
PMPCB-201ENST00000249269 ALDH1L2Q3SY69 923 aa18.43■□□□□ 0.54
PMPCB-201ENST00000249269 GPBP1L1Q9HC44 474 aaPredicted RBP18.43■□□□□ 0.54
PMPCB-201ENST00000249269 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
PMPCB-201ENST00000249269 NBPF6Q5VWK0 638 aa18.43■□□□□ 0.54
PMPCB-201ENST00000249269 NBPF5PQ86XG9 351 aaPredicted RBP18.43■□□□□ 0.54
PMPCB-201ENST00000249269 NBPF4Q96M43 638 aa18.43■□□□□ 0.54
PMPCB-201ENST00000249269 GBP4Q96PP9 640 aa18.43■□□□□ 0.54
PMPCB-201ENST00000249269 EVC2Q86UK5 1308 aa18.43■□□□□ 0.54
PMPCB-201ENST00000249269 ANKRD26Q9UPS8 1709 aa18.43■□□□□ 0.54
PMPCB-201ENST00000249269 NOS1P29475 1434 aa18.42■□□□□ 0.54
PMPCB-201ENST00000249269 MTHFSP49914 203 aa18.42■□□□□ 0.54
PMPCB-201ENST00000249269 GORABQ5T7V8 394 aa18.42■□□□□ 0.54
PMPCB-201ENST00000249269 IBTKQ9P2D0 1353 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms