RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 CRB1P82279 1406 aa29.58■■■□□ 2.33
HCFC1R1-201ENST00000248089 TCP11L2Q8N4U5 519 aa29.58■■■□□ 2.33
HCFC1R1-201ENST00000248089 WNK3Q9BYP7 1800 aa29.57■■■□□ 2.32
HCFC1R1-201ENST00000248089 FAM182BQ5T319 152 aa29.57■■■□□ 2.32
HCFC1R1-201ENST00000248089 MYOM1P52179 1685 aa29.56■■■□□ 2.32
HCFC1R1-201ENST00000248089 ANKRD36BQ8N2N9 1353 aa29.56■■■□□ 2.32
HCFC1R1-201ENST00000248089 RGPD1P0DJD0 1748 aa29.55■■■□□ 2.32
HCFC1R1-201ENST00000248089 PARP4Q9UKK3 1724 aaKnown RBP29.55■■■□□ 2.32
HCFC1R1-201ENST00000248089 SF3B2Q13435 895 aaKnown RBP29.55■■■□□ 2.32
HCFC1R1-201ENST00000248089 BARGINQ6ZT62 677 aa29.55■■■□□ 2.32
HCFC1R1-201ENST00000248089 AXIN2Q9Y2T1 843 aa29.55■■■□□ 2.32
HCFC1R1-201ENST00000248089 ABCC6O95255 1503 aa29.55■■■□□ 2.32
HCFC1R1-201ENST00000248089 OVOS2A0A0J9YW53 1432 aa29.54■■■□□ 2.32
HCFC1R1-201ENST00000248089 OVOS2Q6IE36 1432 aa29.54■■■□□ 2.32
HCFC1R1-201ENST00000248089 CDCA8Q53HL2 280 aa29.54■■■□□ 2.32
HCFC1R1-201ENST00000248089 TOM1L2Q6ZVM7 507 aa29.53■■■□□ 2.32
HCFC1R1-201ENST00000248089 THRAP3Q9Y2W1 955 aaKnown RBP29.52■■■□□ 2.32
HCFC1R1-201ENST00000248089 WDR17Q8IZU2 1322 aa29.51■■■□□ 2.32
HCFC1R1-201ENST00000248089 KIF20BQ96Q89 1820 aa29.51■■■□□ 2.31
HCFC1R1-201ENST00000248089 CSB-PGBD3P0DP91 1061 aa29.5■■■□□ 2.31
HCFC1R1-201ENST00000248089 LRRC37A3O60309 1634 aa29.49■■■□□ 2.31
HCFC1R1-201ENST00000248089 TNS1Q9HBL0 1735 aaKnown RBP29.48■■■□□ 2.31
HCFC1R1-201ENST00000248089 DEFB132Q7Z7B7 95 aa29.48■■■□□ 2.31
HCFC1R1-201ENST00000248089 PDE3BQ13370 1112 aa29.47■■■□□ 2.31
HCFC1R1-201ENST00000248089 COG3Q96JB2 828 aa29.45■■■□□ 2.31
HCFC1R1-201ENST00000248089 EIF4G2P78344 907 aaKnown RBP eCLIP29.42■■■□□ 2.3
HCFC1R1-201ENST00000248089 POLR3GLQ9BT43 218 aa29.42■■■□□ 2.3
HCFC1R1-201ENST00000248089 BAG6P46379 1132 aa29.41■■■□□ 2.3
HCFC1R1-201ENST00000248089 FAM196AQ6ZSG2 479 aa29.41■■■□□ 2.3
HCFC1R1-201ENST00000248089 HSPA5P11021 654 aaKnown RBP29.4■■■□□ 2.3
HCFC1R1-201ENST00000248089 CARD10Q9BWT7 1032 aa29.4■■■□□ 2.3
HCFC1R1-201ENST00000248089 ERBB3P21860 1342 aa29.39■■■□□ 2.3
HCFC1R1-201ENST00000248089 TRIM37O94972 964 aa29.38■■■□□ 2.29
HCFC1R1-201ENST00000248089 GGNBP2Q9H3C7 697 aa29.38■■■□□ 2.29
HCFC1R1-201ENST00000248089 FAM208AQ9UK61 1670 aaKnown RBP29.37■■■□□ 2.29
HCFC1R1-201ENST00000248089 DDB1Q16531 1140 aa29.37■■■□□ 2.29
HCFC1R1-201ENST00000248089 CCDC7Q96M83 1385 aa29.37■■■□□ 2.29
HCFC1R1-201ENST00000248089 NSD3Q9BZ95 1437 aa29.37■■■□□ 2.29
HCFC1R1-201ENST00000248089 PEAK1Q9H792 1746 aa29.36■■■□□ 2.29
HCFC1R1-201ENST00000248089 FYB1O15117 783 aa29.35■■■□□ 2.29
HCFC1R1-201ENST00000248089 ANKRD24Q8TF21 1146 aa29.35■■■□□ 2.29
HCFC1R1-201ENST00000248089 NLRP2Q9NX02 1062 aa29.35■■■□□ 2.29
HCFC1R1-201ENST00000248089 OVOS2A0A0G2JMS6 1433 aa29.34■■■□□ 2.29
HCFC1R1-201ENST00000248089 DISP2A7MBM2 1401 aa29.34■■■□□ 2.29
HCFC1R1-201ENST00000248089 SBF2Q86WG5 1849 aa29.34■■■□□ 2.29
HCFC1R1-201ENST00000248089 FBLN1P23142 703 aa29.33■■■□□ 2.29
HCFC1R1-201ENST00000248089 CDCA7Q9BWT1 371 aaPredicted RBP29.33■■■□□ 2.29
HCFC1R1-201ENST00000248089 MAP3K19Q56UN5 1328 aa29.32■■■□□ 2.28
HCFC1R1-201ENST00000248089 EN1Q05925 392 aaPredicted RBP29.32■■■□□ 2.28
HCFC1R1-201ENST00000248089 IP6K1Q92551 441 aa29.31■■■□□ 2.28
HCFC1R1-201ENST00000248089 LTV1Q96GA3 475 aaPredicted RBP29.31■■■□□ 2.28
HCFC1R1-201ENST00000248089 CARD14Q9BXL6 1004 aa29.31■■■□□ 2.28
HCFC1R1-201ENST00000248089 RGPD2P0DJD1 1756 aa29.31■■■□□ 2.28
HCFC1R1-201ENST00000248089 AMPHP49418 695 aa29.3■■■□□ 2.28
HCFC1R1-201ENST00000248089 RRS1Q15050 365 aaKnown RBP29.28■■■□□ 2.28
HCFC1R1-201ENST00000248089 TNS2Q63HR2 1409 aa29.28■■■□□ 2.28
HCFC1R1-201ENST00000248089 HOXC9P31274 260 aa29.27■■■□□ 2.28
HCFC1R1-201ENST00000248089 APBA3O96018 575 aa29.26■■■□□ 2.27
HCFC1R1-201ENST00000248089 RTL1A6NKG5 1358 aa29.26■■■□□ 2.27
HCFC1R1-201ENST00000248089 C11orf95C9JLR9 678 aaPredicted RBP29.24■■■□□ 2.27
HCFC1R1-201ENST00000248089 MARCH10Q8NA82 808 aaPredicted RBP29.24■■■□□ 2.27
HCFC1R1-201ENST00000248089 ANKRD26Q9UPS8 1709 aa29.24■■■□□ 2.27
HCFC1R1-201ENST00000248089 EXOC5O00471 708 aa29.23■■■□□ 2.27
HCFC1R1-201ENST00000248089 EZH2Q15910 746 aaKnown RBP29.23■■■□□ 2.27
HCFC1R1-201ENST00000248089 RREB1Q92766 1687 aa29.23■■■□□ 2.27
HCFC1R1-201ENST00000248089 IL2RBP14784 551 aa29.22■■■□□ 2.27
HCFC1R1-201ENST00000248089 CGNL1Q0VF96 1302 aa29.21■■■□□ 2.27
HCFC1R1-201ENST00000248089 NUP188Q5SRE5 1749 aa29.19■■■□□ 2.26
HCFC1R1-201ENST00000248089 SMG6Q86US8 1419 aaKnown RBP29.19■■■□□ 2.26
HCFC1R1-201ENST00000248089 MAP2P11137 1827 aaKnown RBP29.18■■■□□ 2.26
HCFC1R1-201ENST00000248089 CAMKK2Q96RR4 588 aa29.18■■■□□ 2.26
HCFC1R1-201ENST00000248089 PARD3Q8TEW0 1356 aa29.17■■■□□ 2.26
HCFC1R1-201ENST00000248089 SRCAPQ6ZRS2 3230 aa29.16■■■□□ 2.26
HCFC1R1-201ENST00000248089 RGPD3A6NKT7 1758 aaPredicted RBP29.16■■■□□ 2.26
HCFC1R1-201ENST00000248089 RGPD4Q7Z3J3 1758 aa29.16■■■□□ 2.26
HCFC1R1-201ENST00000248089 FLT4P35916 1363 aa29.15■■■□□ 2.26
HCFC1R1-201ENST00000248089 PSDA5PKW4 1024 aaPredicted RBP29.15■■■□□ 2.26
HCFC1R1-201ENST00000248089 NHSQ6T4R5 1651 aa29.15■■■□□ 2.26
HCFC1R1-201ENST00000248089 BCL9O00512 1426 aa29.14■■■□□ 2.26
HCFC1R1-201ENST00000248089 PANK3Q9H999 370 aa29.14■■■□□ 2.26
HCFC1R1-201ENST00000248089 KAT6BQ8WYB5 2073 aa29.14■■■□□ 2.25
HCFC1R1-201ENST00000248089 EMILIN1Q9Y6C2 1016 aa29.12■■■□□ 2.25
HCFC1R1-201ENST00000248089 INSRP06213 1382 aa29.12■■■□□ 2.25
HCFC1R1-201ENST00000248089 KIF24Q5T7B8 1368 aa29.12■■■□□ 2.25
HCFC1R1-201ENST00000248089 PPM1GO15355 546 aaPredicted RBP29.11■■■□□ 2.25
HCFC1R1-201ENST00000248089 HSP90AB2PQ58FF8 381 aa29.11■■■□□ 2.25
HCFC1R1-201ENST00000248089 PTF1AQ7RTS3 328 aa29.11■■■□□ 2.25
HCFC1R1-201ENST00000248089 BCL11BQ9C0K0 894 aaPredicted RBP29.11■■■□□ 2.25
HCFC1R1-201ENST00000248089 SHANK3Q9BYB0 1731 aa29.11■■■□□ 2.25
HCFC1R1-201ENST00000248089 USHBP1Q8N6Y0 703 aa29.1■■■□□ 2.25
HCFC1R1-201ENST00000248089 MEGF6O75095 1541 aa29.09■■■□□ 2.25
HCFC1R1-201ENST00000248089 TNNT2P45379 298 aaPredicted RBP29.08■■■□□ 2.25
HCFC1R1-201ENST00000248089 R3HDM1Q15032 1099 aaKnown RBP29.08■■■□□ 2.25
HCFC1R1-201ENST00000248089 NBPF6Q5VWK0 638 aa29.08■■■□□ 2.25
HCFC1R1-201ENST00000248089 NBPF4Q96M43 638 aa29.08■■■□□ 2.25
HCFC1R1-201ENST00000248089 KIF7Q2M1P5 1343 aa29.06■■■□□ 2.24
HCFC1R1-201ENST00000248089 ACSBG1Q96GR2 724 aa29.06■■■□□ 2.24
HCFC1R1-201ENST00000248089 DDX54Q8TDD1 881 aaKnown RBP29.05■■■□□ 2.24
HCFC1R1-201ENST00000248089 BTAF1O14981 1849 aa29.05■■■□□ 2.24
HCFC1R1-201ENST00000248089 DOT1LQ8TEK3 1739 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms