RNA–Protein interactions for RNA: ENST00000243219.7

LAMA4-202, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-202ENST00000243219 RGPD5Q99666 1765 aa20.82■□□□□ 0.92
LAMA4-202ENST00000243219 FAM196AQ6ZSG2 479 aa20.82■□□□□ 0.92
LAMA4-202ENST00000243219 THRAP3Q9Y2W1 955 aaKnown RBP20.82■□□□□ 0.92
LAMA4-202ENST00000243219 CLSPNQ9HAW4 1339 aa20.81■□□□□ 0.92
LAMA4-202ENST00000243219 NFAT5O94916 1531 aa20.81■□□□□ 0.92
LAMA4-202ENST00000243219 RGPD1P0DJD0 1748 aa20.81■□□□□ 0.92
LAMA4-202ENST00000243219 WDR17Q8IZU2 1322 aa20.8■□□□□ 0.92
LAMA4-202ENST00000243219 EDC4Q6P2E9 1401 aaKnown RBP20.8■□□□□ 0.92
LAMA4-202ENST00000243219 TMF1P82094 1093 aa20.8■□□□□ 0.92
LAMA4-202ENST00000243219 PSDA5PKW4 1024 aaPredicted RBP20.79■□□□□ 0.92
LAMA4-202ENST00000243219 CCER1Q8TC90 406 aaPredicted RBP20.79■□□□□ 0.92
LAMA4-202ENST00000243219 USP31Q70CQ4 1352 aa20.79■□□□□ 0.92
LAMA4-202ENST00000243219 APBA3O96018 575 aa20.78■□□□□ 0.92
LAMA4-202ENST00000243219 EZH2Q15910 746 aaKnown RBP20.78■□□□□ 0.92
LAMA4-202ENST00000243219 PUS7Q96PZ0 661 aaKnown RBP20.78■□□□□ 0.92
LAMA4-202ENST00000243219 DDB1Q16531 1140 aa20.77■□□□□ 0.92
LAMA4-202ENST00000243219 TNS1Q9HBL0 1735 aaKnown RBP20.76■□□□□ 0.91
LAMA4-202ENST00000243219 FBLN1P23142 703 aa20.75■□□□□ 0.91
LAMA4-202ENST00000243219 PARP4Q9UKK3 1724 aaKnown RBP20.75■□□□□ 0.91
LAMA4-202ENST00000243219 LTV1Q96GA3 475 aaPredicted RBP20.74■□□□□ 0.91
LAMA4-202ENST00000243219 CARD10Q9BWT7 1032 aa20.74■□□□□ 0.91
LAMA4-202ENST00000243219 NLRP2Q9NX02 1062 aa20.74■□□□□ 0.91
LAMA4-202ENST00000243219 NINLQ9Y2I6 1382 aa20.73■□□□□ 0.91
LAMA4-202ENST00000243219 LTN1O94822 1766 aa20.73■□□□□ 0.91
LAMA4-202ENST00000243219 SLC24A1O60721 1099 aa20.73■□□□□ 0.91
LAMA4-202ENST00000243219 COG3Q96JB2 828 aa20.73■□□□□ 0.91
LAMA4-202ENST00000243219 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
LAMA4-202ENST00000243219 LRRC37A3O60309 1634 aa20.73■□□□□ 0.91
LAMA4-202ENST00000243219 OVOS2A0A0J9YW53 1432 aa20.72■□□□□ 0.91
LAMA4-202ENST00000243219 OVOS2Q6IE36 1432 aa20.72■□□□□ 0.91
LAMA4-202ENST00000243219 ANKRD24Q8TF21 1146 aa20.72■□□□□ 0.91
LAMA4-202ENST00000243219 TIMELESSQ9UNS1 1208 aa20.72■□□□□ 0.91
LAMA4-202ENST00000243219 USP54Q70EL1 1684 aa20.71■□□□□ 0.91
LAMA4-202ENST00000243219 GGNBP2Q9H3C7 697 aa20.71■□□□□ 0.91
LAMA4-202ENST00000243219 ANKRD36BQ8N2N9 1353 aa20.71■□□□□ 0.91
LAMA4-202ENST00000243219 R3HDM1Q15032 1099 aaKnown RBP20.7■□□□□ 0.9
LAMA4-202ENST00000243219 MARCH10Q8NA82 808 aaPredicted RBP20.7■□□□□ 0.9
LAMA4-202ENST00000243219 CAMKK2Q96RR4 588 aa20.7■□□□□ 0.9
LAMA4-202ENST00000243219 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
LAMA4-202ENST00000243219 WNK3Q9BYP7 1800 aa20.69■□□□□ 0.9
LAMA4-202ENST00000243219 ERBB3P21860 1342 aa20.69■□□□□ 0.9
LAMA4-202ENST00000243219 SRCAPQ6ZRS2 3230 aa20.69■□□□□ 0.9
LAMA4-202ENST00000243219 EXOC5O00471 708 aa20.68■□□□□ 0.9
LAMA4-202ENST00000243219 PTF1AQ7RTS3 328 aa20.68■□□□□ 0.9
LAMA4-202ENST00000243219 DISP2A7MBM2 1401 aa20.68■□□□□ 0.9
LAMA4-202ENST00000243219 CDCA8Q53HL2 280 aa20.67■□□□□ 0.9
LAMA4-202ENST00000243219 CDCA7Q9BWT1 371 aaPredicted RBP20.67■□□□□ 0.9
LAMA4-202ENST00000243219 CCDC7Q96M83 1385 aa20.67■□□□□ 0.9
LAMA4-202ENST00000243219 AMPHP49418 695 aa20.66■□□□□ 0.9
LAMA4-202ENST00000243219 ABCC6O95255 1503 aa20.66■□□□□ 0.9
LAMA4-202ENST00000243219 MAP3K19Q56UN5 1328 aa20.65■□□□□ 0.9
LAMA4-202ENST00000243219 RRS1Q15050 365 aaKnown RBP20.65■□□□□ 0.9
LAMA4-202ENST00000243219 IP6K1Q92551 441 aa20.65■□□□□ 0.9
LAMA4-202ENST00000243219 PEAK1Q9H792 1746 aa20.64■□□□□ 0.9
LAMA4-202ENST00000243219 FYB1O15117 783 aa20.64■□□□□ 0.89
LAMA4-202ENST00000243219 IL2RBP14784 551 aa20.62■□□□□ 0.89
LAMA4-202ENST00000243219 HOXC9P31274 260 aa20.62■□□□□ 0.89
LAMA4-202ENST00000243219 ACSBG1Q96GR2 724 aa20.62■□□□□ 0.89
LAMA4-202ENST00000243219 HSPA5P11021 654 aaKnown RBP20.61■□□□□ 0.89
LAMA4-202ENST00000243219 CARD14Q9BXL6 1004 aa20.61■□□□□ 0.89
LAMA4-202ENST00000243219 NSD3Q9BZ95 1437 aa20.61■□□□□ 0.89
LAMA4-202ENST00000243219 C11orf95C9JLR9 678 aaPredicted RBP20.6■□□□□ 0.89
LAMA4-202ENST00000243219 TNS2Q63HR2 1409 aa20.6■□□□□ 0.89
LAMA4-202ENST00000243219 SBF2Q86WG5 1849 aa20.6■□□□□ 0.89
LAMA4-202ENST00000243219 MYOM1P52179 1685 aa20.59■□□□□ 0.89
LAMA4-202ENST00000243219 BCL11BQ9C0K0 894 aaPredicted RBP20.59■□□□□ 0.89
LAMA4-202ENST00000243219 PARD3Q8TEW0 1356 aa20.59■□□□□ 0.89
LAMA4-202ENST00000243219 KCNQ2O43526 872 aa20.58■□□□□ 0.89
LAMA4-202ENST00000243219 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.89
LAMA4-202ENST00000243219 NUP188Q5SRE5 1749 aa20.58■□□□□ 0.88
LAMA4-202ENST00000243219 RREB1Q92766 1687 aa20.58■□□□□ 0.88
LAMA4-202ENST00000243219 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
LAMA4-202ENST00000243219 NBPF14Q5TI25 921 aa20.57■□□□□ 0.88
LAMA4-202ENST00000243219 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
LAMA4-202ENST00000243219 DDX54Q8TDD1 881 aaKnown RBP20.56■□□□□ 0.88
LAMA4-202ENST00000243219 RGPD2P0DJD1 1756 aa20.54■□□□□ 0.88
LAMA4-202ENST00000243219 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
LAMA4-202ENST00000243219 PLSCR1O15162 318 aa20.52■□□□□ 0.88
LAMA4-202ENST00000243219 HSP90AB2PQ58FF8 381 aa20.52■□□□□ 0.88
LAMA4-202ENST00000243219 EMILIN1Q9Y6C2 1016 aa20.52■□□□□ 0.88
LAMA4-202ENST00000243219 RTL1A6NKG5 1358 aa20.51■□□□□ 0.87
LAMA4-202ENST00000243219 KAT6BQ8WYB5 2073 aa20.51■□□□□ 0.87
LAMA4-202ENST00000243219 NBPF6Q5VWK0 638 aa20.51■□□□□ 0.87
LAMA4-202ENST00000243219 PROM2Q8N271 834 aa20.51■□□□□ 0.87
LAMA4-202ENST00000243219 NBPF4Q96M43 638 aa20.51■□□□□ 0.87
LAMA4-202ENST00000243219 BCL9O00512 1426 aa20.51■□□□□ 0.87
LAMA4-202ENST00000243219 TNNT2P45379 298 aaPredicted RBP20.5■□□□□ 0.87
LAMA4-202ENST00000243219 ANO8Q9HCE9 1232 aaPredicted RBP20.5■□□□□ 0.87
LAMA4-202ENST00000243219 FAM208AQ9UK61 1670 aaKnown RBP20.5■□□□□ 0.87
LAMA4-202ENST00000243219 LRP5O75197 1615 aa20.49■□□□□ 0.87
LAMA4-202ENST00000243219 TXNRD1Q16881 649 aa20.49■□□□□ 0.87
LAMA4-202ENST00000243219 SMG6Q86US8 1419 aaKnown RBP20.49■□□□□ 0.87
LAMA4-202ENST00000243219 CGNL1Q0VF96 1302 aa20.48■□□□□ 0.87
LAMA4-202ENST00000243219 MEGF6O75095 1541 aa20.48■□□□□ 0.87
LAMA4-202ENST00000243219 SYTL4Q96C24 671 aaPredicted RBP20.47■□□□□ 0.87
LAMA4-202ENST00000243219 FLT4P35916 1363 aa20.46■□□□□ 0.87
LAMA4-202ENST00000243219 NHSQ6T4R5 1651 aa20.46■□□□□ 0.87
LAMA4-202ENST00000243219 ZCRB1Q8TBF4 217 aaKnown RBP20.46■□□□□ 0.87
LAMA4-202ENST00000243219 PANK3Q9H999 370 aa20.46■□□□□ 0.87
LAMA4-202ENST00000243219 RAPGEF4Q8WZA2 1011 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms